RNA–Protein interactions for RNA: ENST00000542371.1

USP5-207, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 2

Gene USP5, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-207ENST00000542371 TBC1D32Q96NH3 1257 aa19.48■□□□□ 0.71
USP5-207ENST00000542371 ANKRD18BA2A2Z9 1011 aa19.47■□□□□ 0.71
USP5-207ENST00000542371 TFCP2Q12800 502 aa19.47■□□□□ 0.71
USP5-207ENST00000542371 TNNI3KQ59H18 835 aa19.47■□□□□ 0.71
USP5-207ENST00000542371 LRRC4BQ9NT99 713 aa19.47■□□□□ 0.71
USP5-207ENST00000542371 FPGT-TNNI3KV9GXZ4 949 aa19.47■□□□□ 0.71
USP5-207ENST00000542371 RTL9Q8NET4 1388 aa19.46■□□□□ 0.71
USP5-207ENST00000542371 MFAP1P55081 439 aaKnown RBP19.46■□□□□ 0.71
USP5-207ENST00000542371 TAF7LQ5H9L4 462 aa19.46■□□□□ 0.71
USP5-207ENST00000542371 USPL1Q5W0Q7 1092 aa19.46■□□□□ 0.71
USP5-207ENST00000542371 SYNE4Q8N205 404 aa19.46■□□□□ 0.71
USP5-207ENST00000542371 ARHGEF1Q92888 912 aaKnown RBP19.46■□□□□ 0.71
USP5-207ENST00000542371 IPO9Q96P70 1041 aaKnown RBP19.46■□□□□ 0.71
USP5-207ENST00000542371 NYXQ9GZU5 481 aa19.46■□□□□ 0.71
USP5-207ENST00000542371 BCL2L12Q9HB09 334 aa19.46■□□□□ 0.71
USP5-207ENST00000542371 TRIM6-TRIM34B2RNG4 842 aa19.45■□□□□ 0.7
USP5-207ENST00000542371 TSHZ3Q63HK5 1081 aa19.45■□□□□ 0.7
USP5-207ENST00000542371 CNTROBQ8N137 903 aa19.45■□□□□ 0.7
USP5-207ENST00000542371 C22orf23Q9BZE7 217 aa19.45■□□□□ 0.7
USP5-207ENST00000542371 RGS17Q9UGC6 210 aaPredicted RBP19.45■□□□□ 0.7
USP5-207ENST00000542371 COL24A1Q17RW2 1714 aa19.45■□□□□ 0.7
USP5-207ENST00000542371 DDX60Q8IY21 1712 aaKnown RBP19.45■□□□□ 0.7
USP5-207ENST00000542371 ITGA6P23229 1130 aa19.44■□□□□ 0.7
USP5-207ENST00000542371 RFC4P35249 363 aa19.44■□□□□ 0.7
USP5-207ENST00000542371 SLC10A5Q5PT55 438 aa19.44■□□□□ 0.7
USP5-207ENST00000542371 ZNF594Q96JF6 807 aaPredicted RBP19.44■□□□□ 0.7
USP5-207ENST00000542371 CCDC8Q9H0W5 538 aaPredicted RBP19.44■□□□□ 0.7
USP5-207ENST00000542371 GREM2Q9H772 168 aa19.44■□□□□ 0.7
USP5-207ENST00000542371 CEP126Q9P2H0 1117 aa19.44■□□□□ 0.7
USP5-207ENST00000542371 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.44■□□□□ 0.7
USP5-207ENST00000542371 C4AP0C0L4 1744 aa19.44■□□□□ 0.7
USP5-207ENST00000542371 SSFA2P28290 1259 aa19.43■□□□□ 0.7
USP5-207ENST00000542371 TXNRD1Q16881 649 aa19.43■□□□□ 0.7
USP5-207ENST00000542371 CCDC152Q4G0S7 254 aa19.43■□□□□ 0.7
USP5-207ENST00000542371 LRRC24Q50LG9 513 aa19.43■□□□□ 0.7
USP5-207ENST00000542371 RILPL2Q969X0 211 aa19.43■□□□□ 0.7
USP5-207ENST00000542371 SETDB2Q96T68 719 aa19.43■□□□□ 0.7
USP5-207ENST00000542371 AKAP2Q9Y2D5 859 aa19.43■□□□□ 0.7
USP5-207ENST00000542371 UBR3Q6ZT12 1888 aa19.43■□□□□ 0.7
USP5-207ENST00000542371 ATP5JP18859 108 aa19.42■□□□□ 0.7
USP5-207ENST00000542371 RBM25P49756 843 aaKnown RBP19.42■□□□□ 0.7
USP5-207ENST00000542371 TBC1D9BQ66K14 1250 aa19.42■□□□□ 0.7
USP5-207ENST00000542371 HCLS1P14317 486 aaPredicted RBP19.41■□□□□ 0.7
USP5-207ENST00000542371 POTEAQ6S8J7 498 aa19.41■□□□□ 0.7
USP5-207ENST00000542371 LDHAL6AQ6ZMR3 332 aa19.41■□□□□ 0.7
USP5-207ENST00000542371 EVI5LQ96CN4 794 aa19.41■□□□□ 0.7
USP5-207ENST00000542371 PUS3Q9BZE2 481 aaKnown RBP19.41■□□□□ 0.7
USP5-207ENST00000542371 SRP68Q9UHB9 627 aaKnown RBP19.41■□□□□ 0.7
USP5-207ENST00000542371 DBNLQ9UJU6 430 aaKnown RBP19.41■□□□□ 0.7
USP5-207ENST00000542371 RIPOR2Q9Y4F9 1068 aa19.41■□□□□ 0.7
USP5-207ENST00000542371 RGPD3A6NKT7 1758 aaPredicted RBP19.41■□□□□ 0.7
USP5-207ENST00000542371 RGPD4Q7Z3J3 1758 aa19.41■□□□□ 0.7
USP5-207ENST00000542371 AK9Q5TCS8 1911 aa19.41■□□□□ 0.7
USP5-207ENST00000542371 LRP5O75197 1615 aa19.4■□□□□ 0.7
USP5-207ENST00000542371 FAM177BA6PVY3 158 aa19.4■□□□□ 0.7
USP5-207ENST00000542371 EPB41L2O43491 1005 aaKnown RBP19.4■□□□□ 0.7
USP5-207ENST00000542371 REC8O95072 547 aa19.4■□□□□ 0.7
USP5-207ENST00000542371 CHMLP26374 656 aa19.4■□□□□ 0.7
USP5-207ENST00000542371 SF3B3Q15393 1217 aaKnown RBP19.4■□□□□ 0.7
USP5-207ENST00000542371 ZNF609O15014 1411 aa19.4■□□□□ 0.7
USP5-207ENST00000542371 APBA3O96018 575 aa19.39■□□□□ 0.69
USP5-207ENST00000542371 TPTE2Q6XPS3 522 aa19.39■□□□□ 0.69
USP5-207ENST00000542371 AMIGO3Q86WK7 504 aa19.39■□□□□ 0.69
USP5-207ENST00000542371 TICAM2Q86XR7 235 aa19.39■□□□□ 0.69
USP5-207ENST00000542371 PROM2Q8N271 834 aa19.39■□□□□ 0.69
USP5-207ENST00000542371 CCDC85AQ96PX6 553 aaPredicted RBP19.39■□□□□ 0.69
USP5-207ENST00000542371 TLR7Q9NYK1 1049 aaKnown RBP19.39■□□□□ 0.69
USP5-207ENST00000542371 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.38■□□□□ 0.69
USP5-207ENST00000542371 HIP1O00291 1037 aa19.38■□□□□ 0.69
USP5-207ENST00000542371 ERFEQ4G0M1 354 aa19.38■□□□□ 0.69
USP5-207ENST00000542371 MROH5Q6ZUA9 1318 aa19.38■□□□□ 0.69
USP5-207ENST00000542371 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.38■□□□□ 0.69
USP5-207ENST00000542371 ESYT1Q9BSJ8 1104 aa19.38■□□□□ 0.69
USP5-207ENST00000542371 CNNM1Q9NRU3 951 aa19.38■□□□□ 0.69
USP5-207ENST00000542371 PHF14O94880 888 aa19.37■□□□□ 0.69
USP5-207ENST00000542371 GTF2E1P29083 439 aaPredicted RBP19.37■□□□□ 0.69
USP5-207ENST00000542371 SMIM5Q71RC9 77 aa19.37■□□□□ 0.69
USP5-207ENST00000542371 NBPF5PQ86XG9 351 aaPredicted RBP19.37■□□□□ 0.69
USP5-207ENST00000542371 DBNDD2Q9BQY9 259 aa19.37■□□□□ 0.69
USP5-207ENST00000542371 TNS1Q9HBL0 1735 aaKnown RBP19.37■□□□□ 0.69
USP5-207ENST00000542371 RIC1Q4ADV7 1423 aa19.36■□□□□ 0.69
USP5-207ENST00000542371 CARMIL3Q8ND23 1372 aa19.36■□□□□ 0.69
USP5-207ENST00000542371 A0A1B0GUL7 405 aa19.36■□□□□ 0.69
USP5-207ENST00000542371 METTL24Q5JXM2 366 aa19.36■□□□□ 0.69
USP5-207ENST00000542371 BICDL1Q6ZP65 573 aa19.36■□□□□ 0.69
USP5-207ENST00000542371 NEUROD6Q96NK8 337 aa19.36■□□□□ 0.69
USP5-207ENST00000542371 CDC5LQ99459 802 aaKnown RBP19.36■□□□□ 0.69
USP5-207ENST00000542371 USP26Q9BXU7 913 aa19.36■□□□□ 0.69
USP5-207ENST00000542371 RFX7Q2KHR2 1363 aa19.35■□□□□ 0.69
USP5-207ENST00000542371 ABCC12Q96J65 1359 aa19.35■□□□□ 0.69
USP5-207ENST00000542371 IGHMBP2P38935 993 aaKnown RBP19.35■□□□□ 0.69
USP5-207ENST00000542371 FLAD1Q8NFF5 587 aa19.35■□□□□ 0.69
USP5-207ENST00000542371 RUFY2Q8WXA3 655 aa19.35■□□□□ 0.69
USP5-207ENST00000542371 HAUS7Q99871 368 aa19.35■□□□□ 0.69
USP5-207ENST00000542371 MAP4K4O95819 1239 aaPredicted RBP19.34■□□□□ 0.69
USP5-207ENST00000542371 TIMM10P62072 90 aa19.34■□□□□ 0.69
USP5-207ENST00000542371 AKT1S1Q96B36 256 aa19.34■□□□□ 0.69
USP5-207ENST00000542371 NLRP3Q96P20 1036 aa19.34■□□□□ 0.69
USP5-207ENST00000542371 MPHOSPH8Q99549 860 aa19.34■□□□□ 0.69
USP5-207ENST00000542371 BOLA2Q9H3K6 86 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms