RNA–Protein interactions for RNA: ENST00000542174.5

CDK2AP1-205, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-205ENST00000542174 H7C1W4 665 aa17.81■□□□□ 0.44
CDK2AP1-205ENST00000542174 TTC14Q96N46 770 aa17.81■□□□□ 0.44
CDK2AP1-205ENST00000542174 TM6SF1Q9BZW5 370 aa17.81■□□□□ 0.44
CDK2AP1-205ENST00000542174 PTPN12Q05209 780 aaKnown RBP17.8■□□□□ 0.44
CDK2AP1-205ENST00000542174 PKP1Q13835 747 aa17.8■□□□□ 0.44
CDK2AP1-205ENST00000542174 UBE3BQ7Z3V4 1068 aa17.8■□□□□ 0.44
CDK2AP1-205ENST00000542174 CCDC8Q9H0W5 538 aaPredicted RBP17.8■□□□□ 0.44
CDK2AP1-205ENST00000542174 ITGB4P16144 1822 aa17.8■□□□□ 0.44
CDK2AP1-205ENST00000542174 TXNRD1Q16881 649 aa17.79■□□□□ 0.44
CDK2AP1-205ENST00000542174 UPF3BQ9BZI7 483 aaKnown RBP17.79■□□□□ 0.44
CDK2AP1-205ENST00000542174 SIL1Q9H173 461 aa17.79■□□□□ 0.44
CDK2AP1-205ENST00000542174 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.79■□□□□ 0.44
CDK2AP1-205ENST00000542174 XRCC6P12956 609 aaKnown RBP eCLIP17.79■□□□□ 0.44
CDK2AP1-205ENST00000542174 PRKCSHP14314 528 aaPredicted RBP17.79■□□□□ 0.44
CDK2AP1-205ENST00000542174 PIP4K2AP48426 406 aaPredicted RBP17.79■□□□□ 0.44
CDK2AP1-205ENST00000542174 LMBRD1Q9NUN5 540 aa17.79■□□□□ 0.44
CDK2AP1-205ENST00000542174 RFX7Q2KHR2 1363 aa17.78■□□□□ 0.44
CDK2AP1-205ENST00000542174 BRD1O95696 1058 aa17.78■□□□□ 0.44
CDK2AP1-205ENST00000542174 ATP5JP18859 108 aa17.78■□□□□ 0.44
CDK2AP1-205ENST00000542174 MCTP1Q6DN14 999 aa17.78■□□□□ 0.44
CDK2AP1-205ENST00000542174 CWC25Q9NXE8 425 aaPredicted RBP17.78■□□□□ 0.44
CDK2AP1-205ENST00000542174 CCDC171Q6TFL3 1326 aa17.77■□□□□ 0.44
CDK2AP1-205ENST00000542174 ATP5J2-PTCD1G3V325 749 aa17.77■□□□□ 0.44
CDK2AP1-205ENST00000542174 PTCD1O75127 700 aaKnown RBP17.77■□□□□ 0.44
CDK2AP1-205ENST00000542174 RASEFQ8IZ41 740 aa17.77■□□□□ 0.44
CDK2AP1-205ENST00000542174 CCDC191Q8NCU4 936 aa17.77■□□□□ 0.44
CDK2AP1-205ENST00000542174 DDX49Q9Y6V7 483 aaKnown RBP17.77■□□□□ 0.44
CDK2AP1-205ENST00000542174 PRIM1P49642 420 aaKnown RBP17.77■□□□□ 0.43
CDK2AP1-205ENST00000542174 PTH1RQ03431 593 aa17.77■□□□□ 0.43
CDK2AP1-205ENST00000542174 NECTIN1Q15223 517 aa17.77■□□□□ 0.43
CDK2AP1-205ENST00000542174 TNNI3KQ59H18 835 aa17.77■□□□□ 0.43
CDK2AP1-205ENST00000542174 TICAM2Q86XR7 235 aa17.77■□□□□ 0.43
CDK2AP1-205ENST00000542174 KLHDC4Q8TBB5 520 aa17.77■□□□□ 0.43
CDK2AP1-205ENST00000542174 RTN4Q9NQC3 1192 aaKnown RBP17.77■□□□□ 0.43
CDK2AP1-205ENST00000542174 LIMCH1Q9UPQ0 1083 aa17.77■□□□□ 0.43
CDK2AP1-205ENST00000542174 FPGT-TNNI3KV9GXZ4 949 aa17.77■□□□□ 0.43
CDK2AP1-205ENST00000542174 FOXO4P98177 505 aa17.76■□□□□ 0.43
CDK2AP1-205ENST00000542174 MAP4K1Q92918 833 aa17.76■□□□□ 0.43
CDK2AP1-205ENST00000542174 TEX13AQ9BXU3 409 aaPredicted RBP17.76■□□□□ 0.43
CDK2AP1-205ENST00000542174 TLR7Q9NYK1 1049 aaKnown RBP17.76■□□□□ 0.43
CDK2AP1-205ENST00000542174 NMIQ13287 307 aaPredicted RBP17.75■□□□□ 0.43
CDK2AP1-205ENST00000542174 VPS53Q5VIR6 699 aa17.75■□□□□ 0.43
CDK2AP1-205ENST00000542174 TTLL7Q6ZT98 887 aa17.75■□□□□ 0.43
CDK2AP1-205ENST00000542174 VSIG10Q8N0Z9 540 aa17.75■□□□□ 0.43
CDK2AP1-205ENST00000542174 BOLA2Q9H3K6 86 aa17.75■□□□□ 0.43
CDK2AP1-205ENST00000542174 GRPEL1Q9HAV7 217 aa17.75■□□□□ 0.43
CDK2AP1-205ENST00000542174 ZSWIM6Q9HCJ5 1215 aa17.75■□□□□ 0.43
CDK2AP1-205ENST00000542174 GPR108Q9NPR9 543 aa17.75■□□□□ 0.43
CDK2AP1-205ENST00000542174 LY75O60449 1722 aa17.75■□□□□ 0.43
CDK2AP1-205ENST00000542174 A1BGP04217 495 aa17.75■□□□□ 0.43
CDK2AP1-205ENST00000542174 TFCP2Q12800 502 aa17.75■□□□□ 0.43
CDK2AP1-205ENST00000542174 FSD1Q9BTV5 496 aa17.75■□□□□ 0.43
CDK2AP1-205ENST00000542174 LRRC4BQ9NT99 713 aa17.75■□□□□ 0.43
CDK2AP1-205ENST00000542174 MED23Q9ULK4 1368 aa17.74■□□□□ 0.43
CDK2AP1-205ENST00000542174 TCHHQ07283 1943 aa17.74■□□□□ 0.43
CDK2AP1-205ENST00000542174 ZKSCAN1P17029 563 aaPredicted RBP17.74■□□□□ 0.43
CDK2AP1-205ENST00000542174 LMBR1LQ6UX01 489 aa17.74■□□□□ 0.43
CDK2AP1-205ENST00000542174 ZSCAN31Q96LW9 406 aaPredicted RBP17.74■□□□□ 0.43
CDK2AP1-205ENST00000542174 ATG3Q9NT62 314 aa17.74■□□□□ 0.43
CDK2AP1-205ENST00000542174 TMOD3Q9NYL9 352 aa17.74■□□□□ 0.43
CDK2AP1-205ENST00000542174 DBNLQ9UJU6 430 aaKnown RBP17.74■□□□□ 0.43
CDK2AP1-205ENST00000542174 CASZ1Q86V15 1759 aa17.73■□□□□ 0.43
CDK2AP1-205ENST00000542174 AK2P54819 239 aa17.73■□□□□ 0.43
CDK2AP1-205ENST00000542174 JARID2Q92833 1246 aaPredicted RBP17.73■□□□□ 0.43
CDK2AP1-205ENST00000542174 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.73■□□□□ 0.43
CDK2AP1-205ENST00000542174 WDR33Q9C0J8 1336 aaKnown RBP17.73■□□□□ 0.43
CDK2AP1-205ENST00000542174 CASTP20810 708 aaKnown RBP17.72■□□□□ 0.43
CDK2AP1-205ENST00000542174 PRPF40BQ6NWY9 871 aaKnown RBP17.72■□□□□ 0.43
CDK2AP1-205ENST00000542174 RUFY3Q7L099 469 aa17.72■□□□□ 0.43
CDK2AP1-205ENST00000542174 FAM227BQ96M60 508 aa17.72■□□□□ 0.43
CDK2AP1-205ENST00000542174 RBM8AQ9Y5S9 174 aaKnown RBP17.72■□□□□ 0.43
CDK2AP1-205ENST00000542174 CYP46A1Q9Y6A2 500 aa17.72■□□□□ 0.43
CDK2AP1-205ENST00000542174 SPEF2Q9C093 1822 aa17.72■□□□□ 0.43
CDK2AP1-205ENST00000542174 ZNF445P59923 1031 aa17.72■□□□□ 0.43
CDK2AP1-205ENST00000542174 TRIM28Q13263 835 aaKnown RBP17.72■□□□□ 0.43
CDK2AP1-205ENST00000542174 RNF20Q5VTR2 975 aa17.72■□□□□ 0.43
CDK2AP1-205ENST00000542174 CREB3L3Q68CJ9 461 aa17.72■□□□□ 0.43
CDK2AP1-205ENST00000542174 NOL8Q76FK4 1167 aaKnown RBP17.72■□□□□ 0.43
CDK2AP1-205ENST00000542174 ISCA1Q9BUE6 129 aa17.72■□□□□ 0.43
CDK2AP1-205ENST00000542174 SH2B1Q9NRF2 756 aaPredicted RBP17.72■□□□□ 0.43
CDK2AP1-205ENST00000542174 PSMA5P28066 241 aa17.71■□□□□ 0.43
CDK2AP1-205ENST00000542174 TSGA10IPQ3SY00 556 aa17.71■□□□□ 0.43
CDK2AP1-205ENST00000542174 JAKMIP1Q96N16 626 aaKnown RBP17.71■□□□□ 0.43
CDK2AP1-205ENST00000542174 HAUS7Q99871 368 aa17.71■□□□□ 0.43
CDK2AP1-205ENST00000542174 PDRG1Q9NUG6 133 aa17.71■□□□□ 0.43
CDK2AP1-205ENST00000542174 RPAP1Q9BWH6 1393 aaPredicted RBP17.7■□□□□ 0.42
CDK2AP1-205ENST00000542174 A0A0D9SFI3 127 aa17.7■□□□□ 0.42
CDK2AP1-205ENST00000542174 PRPF40AO75400 957 aaKnown RBP17.7■□□□□ 0.42
CDK2AP1-205ENST00000542174 CIAO1O76071 339 aa17.7■□□□□ 0.42
CDK2AP1-205ENST00000542174 IL15P40933 162 aaPredicted RBP17.7■□□□□ 0.42
CDK2AP1-205ENST00000542174 ALDH8A1Q9H2A2 487 aaPredicted RBP17.7■□□□□ 0.42
CDK2AP1-205ENST00000542174 HMG20BQ9P0W2 317 aa17.7■□□□□ 0.42
CDK2AP1-205ENST00000542174 KCNJ4P48050 445 aa17.7■□□□□ 0.42
CDK2AP1-205ENST00000542174 SLC15A2Q16348 729 aa17.7■□□□□ 0.42
CDK2AP1-205ENST00000542174 ATG9AQ7Z3C6 839 aa17.7■□□□□ 0.42
CDK2AP1-205ENST00000542174 GAS2L3Q86XJ1 694 aa17.7■□□□□ 0.42
CDK2AP1-205ENST00000542174 SYTL4Q96C24 671 aaPredicted RBP17.7■□□□□ 0.42
CDK2AP1-205ENST00000542174 FBXO3Q9UK99 471 aa17.7■□□□□ 0.42
CDK2AP1-205ENST00000542174 ANKRD36CQ5JPF3 1778 aa17.69■□□□□ 0.42
CDK2AP1-205ENST00000542174 SLC27A2O14975 620 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms