RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 CTSWP56202 376 aa21.4■■□□□ 1.02
GTDC1-219ENST00000542155 DDR1Q08345 913 aa21.4■■□□□ 1.02
GTDC1-219ENST00000542155 NBPF5PQ86XG9 351 aaPredicted RBP21.4■■□□□ 1.02
GTDC1-219ENST00000542155 GREM2Q9H772 168 aa21.4■■□□□ 1.02
GTDC1-219ENST00000542155 NOP58Q9Y2X3 529 aaKnown RBP21.4■■□□□ 1.02
GTDC1-219ENST00000542155 MSL1Q68DK7 614 aa21.38■■□□□ 1.01
GTDC1-219ENST00000542155 FLAD1Q8NFF5 587 aa21.38■■□□□ 1.01
GTDC1-219ENST00000542155 OTUD7AQ8TE49 926 aaPredicted RBP21.37■■□□□ 1.01
GTDC1-219ENST00000542155 CARMIL3Q8ND23 1372 aa21.37■■□□□ 1.01
GTDC1-219ENST00000542155 COPRSQ9NQ92 184 aa21.37■■□□□ 1.01
GTDC1-219ENST00000542155 TPTE2Q6XPS3 522 aa21.36■■□□□ 1.01
GTDC1-219ENST00000542155 POLRMTO00411 1230 aaKnown RBP21.36■■□□□ 1.01
GTDC1-219ENST00000542155 SASH1O94885 1247 aa21.36■■□□□ 1.01
GTDC1-219ENST00000542155 GTF2E1P29083 439 aaPredicted RBP21.36■■□□□ 1.01
GTDC1-219ENST00000542155 ILDR2Q71H61 639 aa21.36■■□□□ 1.01
GTDC1-219ENST00000542155 IL1RAPL2Q9NP60 686 aa21.36■■□□□ 1.01
GTDC1-219ENST00000542155 SLC10A5Q5PT55 438 aa21.35■■□□□ 1.01
GTDC1-219ENST00000542155 PUS3Q9BZE2 481 aaKnown RBP21.35■■□□□ 1.01
GTDC1-219ENST00000542155 NYXQ9GZU5 481 aa21.35■■□□□ 1.01
GTDC1-219ENST00000542155 COL4A1P02462 1669 aa21.35■■□□□ 1.01
GTDC1-219ENST00000542155 LAMB2P55268 1798 aa21.35■■□□□ 1.01
GTDC1-219ENST00000542155 CASZ1Q86V15 1759 aa21.35■■□□□ 1.01
GTDC1-219ENST00000542155 SERPINB2P05120 415 aa21.35■■□□□ 1.01
GTDC1-219ENST00000542155 ITGA6P23229 1130 aa21.35■■□□□ 1.01
GTDC1-219ENST00000542155 RHPN1Q8TCX5 695 aa21.35■■□□□ 1.01
GTDC1-219ENST00000542155 SEC31BQ9NQW1 1179 aa21.35■■□□□ 1.01
GTDC1-219ENST00000542155 PRR5LQ6MZQ0 368 aa21.34■■□□□ 1.01
GTDC1-219ENST00000542155 LRRCC1Q9C099 1032 aa21.34■■□□□ 1.01
GTDC1-219ENST00000542155 LRRC24Q50LG9 513 aa21.34■■□□□ 1.01
GTDC1-219ENST00000542155 TAF1P21675 1872 aa21.34■■□□□ 1.01
GTDC1-219ENST00000542155 QSER1Q2KHR3 1735 aa21.34■■□□□ 1.01
GTDC1-219ENST00000542155 CCDC57Q2TAC2 916 aa21.33■■□□□ 1.01
GTDC1-219ENST00000542155 NLGN1Q8N2Q7 840 aa21.33■■□□□ 1.01
GTDC1-219ENST00000542155 ATG9AQ7Z3C6 839 aa21.33■■□□□ 1.01
GTDC1-219ENST00000542155 IFIT5Q13325 482 aaKnown RBP21.32■■□□□ 1
GTDC1-219ENST00000542155 RAB11FIP3O75154 756 aa21.32■■□□□ 1
GTDC1-219ENST00000542155 G3BP1Q13283 466 aaKnown RBP eCLIP21.32■■□□□ 1
GTDC1-219ENST00000542155 OS9Q13438 667 aaPredicted RBP21.32■■□□□ 1
GTDC1-219ENST00000542155 CNBD1Q8NA66 436 aa21.32■■□□□ 1
GTDC1-219ENST00000542155 TNRC6CQ9HCJ0 1690 aaKnown RBP21.32■■□□□ 1
GTDC1-219ENST00000542155 MMP10P09238 476 aa21.31■■□□□ 1
GTDC1-219ENST00000542155 KIF1BPQ96EK5 621 aa21.31■■□□□ 1
GTDC1-219ENST00000542155 SF3B3Q15393 1217 aaKnown RBP21.3■■□□□ 1
GTDC1-219ENST00000542155 NPHP1O15259 732 aa21.3■■□□□ 1
GTDC1-219ENST00000542155 PLEKHM2Q8IWE5 1019 aa21.3■■□□□ 1
GTDC1-219ENST00000542155 ANKRD18BA2A2Z9 1011 aa21.29■■□□□ 1
GTDC1-219ENST00000542155 HSP90AB4PQ58FF6 505 aa21.29■■□□□ 1
GTDC1-219ENST00000542155 TFCP2Q12800 502 aa21.29■■□□□ 1
GTDC1-219ENST00000542155 CCDC152Q4G0S7 254 aa21.29■■□□□ 1
GTDC1-219ENST00000542155 EYA2O00167 538 aa21.28■■□□□ 1
GTDC1-219ENST00000542155 TSHZ3Q63HK5 1081 aa21.28■■□□□ 1
GTDC1-219ENST00000542155 NLRP3Q96P20 1036 aa21.28■■□□□ 1
GTDC1-219ENST00000542155 SALL3Q9BXA9 1300 aa21.27■■□□□ 1
GTDC1-219ENST00000542155 TAF7LQ5H9L4 462 aa21.27■■□□□ 1
GTDC1-219ENST00000542155 EAF2Q96CJ1 260 aaPredicted RBP21.27■■□□□ 1
GTDC1-219ENST00000542155 HSP90B1P14625 803 aaKnown RBP21.26■□□□□ 0.99
GTDC1-219ENST00000542155 ZBTB47Q9UFB7 747 aaPredicted RBP21.26■□□□□ 0.99
GTDC1-219ENST00000542155 RIPOR2Q9Y4F9 1068 aa21.26■□□□□ 0.99
GTDC1-219ENST00000542155 NRXN2Q9P2S2 1712 aa21.26■□□□□ 0.99
GTDC1-219ENST00000542155 LDHAL6AQ6ZMR3 332 aa21.26■□□□□ 0.99
GTDC1-219ENST00000542155 RTL9Q8NET4 1388 aa21.25■□□□□ 0.99
GTDC1-219ENST00000542155 ERC1Q8IUD2 1116 aa21.25■□□□□ 0.99
GTDC1-219ENST00000542155 SLC51AQ86UW1 340 aa21.25■□□□□ 0.99
GTDC1-219ENST00000542155 CELF1Q92879 486 aaKnown RBP21.25■□□□□ 0.99
GTDC1-219ENST00000542155 SPEF2Q9C093 1822 aa21.25■□□□□ 0.99
GTDC1-219ENST00000542155 CIAO1O76071 339 aa21.24■□□□□ 0.99
GTDC1-219ENST00000542155 TLR7Q9NYK1 1049 aaKnown RBP21.24■□□□□ 0.99
GTDC1-219ENST00000542155 GOLGB1Q14789 3259 aaKnown RBP21.24■□□□□ 0.99
GTDC1-219ENST00000542155 ANKRD31Q8N7Z5 1873 aa21.24■□□□□ 0.99
GTDC1-219ENST00000542155 IL15P40933 162 aaPredicted RBP21.24■□□□□ 0.99
GTDC1-219ENST00000542155 R3HDM1Q15032 1099 aaKnown RBP21.24■□□□□ 0.99
GTDC1-219ENST00000542155 PARP3Q9Y6F1 533 aa21.24■□□□□ 0.99
GTDC1-219ENST00000542155 ST5P78524 1137 aa21.23■□□□□ 0.99
GTDC1-219ENST00000542155 CCDC8Q9H0W5 538 aaPredicted RBP21.23■□□□□ 0.99
GTDC1-219ENST00000542155 PDE1AP54750 535 aa21.22■□□□□ 0.99
GTDC1-219ENST00000542155 AACSQ86V21 672 aa21.22■□□□□ 0.99
GTDC1-219ENST00000542155 CLASRPQ8N2M8 674 aaKnown RBP21.22■□□□□ 0.99
GTDC1-219ENST00000542155 CNNM1Q9NRU3 951 aa21.22■□□□□ 0.99
GTDC1-219ENST00000542155 LRP5O75197 1615 aa21.22■□□□□ 0.99
GTDC1-219ENST00000542155 RIC1Q4ADV7 1423 aa21.22■□□□□ 0.99
GTDC1-219ENST00000542155 HELBQ8NG08 1087 aaPredicted RBP21.22■□□□□ 0.99
GTDC1-219ENST00000542155 TIMM10P62072 90 aa21.21■□□□□ 0.99
GTDC1-219ENST00000542155 CRY2Q49AN0 593 aa21.21■□□□□ 0.99
GTDC1-219ENST00000542155 TNNI3KQ59H18 835 aa21.21■□□□□ 0.99
GTDC1-219ENST00000542155 FPGT-TNNI3KV9GXZ4 949 aa21.21■□□□□ 0.99
GTDC1-219ENST00000542155 ZBTB7AO95365 584 aa21.21■□□□□ 0.99
GTDC1-219ENST00000542155 VGLL2Q8N8G2 317 aa21.21■□□□□ 0.99
GTDC1-219ENST00000542155 SNAP23O00161 211 aa21.2■□□□□ 0.98
GTDC1-219ENST00000542155 GSPT1P15170 499 aaKnown RBP21.2■□□□□ 0.98
GTDC1-219ENST00000542155 MX1P20591 662 aa21.2■□□□□ 0.98
GTDC1-219ENST00000542155 FBXO3Q9UK99 471 aa21.2■□□□□ 0.98
GTDC1-219ENST00000542155 KLRG2A4D1S0 409 aaPredicted RBP21.2■□□□□ 0.98
GTDC1-219ENST00000542155 PSDA5PKW4 1024 aaPredicted RBP21.2■□□□□ 0.98
GTDC1-219ENST00000542155 WTIPA6NIX2 430 aaPredicted RBP21.19■□□□□ 0.98
GTDC1-219ENST00000542155 MPHOSPH8Q99549 860 aa21.19■□□□□ 0.98
GTDC1-219ENST00000542155 BRIP1Q9BX63 1249 aa21.19■□□□□ 0.98
GTDC1-219ENST00000542155 CEP126Q9P2H0 1117 aa21.19■□□□□ 0.98
GTDC1-219ENST00000542155 STAP2Q9UGK3 403 aa21.19■□□□□ 0.98
GTDC1-219ENST00000542155 DBNLQ9UJU6 430 aaKnown RBP21.19■□□□□ 0.98
GTDC1-219ENST00000542155 TAF5LO75529 589 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms