RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.91□□□□□ -0.66
THBS3-211ENST00000541990 WDR33Q9C0J8 1336 aaKnown RBP10.91□□□□□ -0.66
THBS3-211ENST00000541990 MCM2P49736 904 aa10.91□□□□□ -0.66
THBS3-211ENST00000541990 ILDR2Q71H61 639 aa10.91□□□□□ -0.66
THBS3-211ENST00000541990 FAM184AQ8NB25 1140 aa10.91□□□□□ -0.66
THBS3-211ENST00000541990 SIL1Q9H173 461 aa10.91□□□□□ -0.66
THBS3-211ENST00000541990 EPHA10Q5JZY3 1008 aa10.9□□□□□ -0.66
THBS3-211ENST00000541990 AFF2P51816 1311 aa10.9□□□□□ -0.66
THBS3-211ENST00000541990 ERVV-2B6SEH9 535 aa10.9□□□□□ -0.66
THBS3-211ENST00000541990 CCT4P50991 539 aaKnown RBP10.9□□□□□ -0.66
THBS3-211ENST00000541990 KSR2Q6VAB6 950 aa10.9□□□□□ -0.66
THBS3-211ENST00000541990 ANKRD13DQ6ZTN6 518 aa10.9□□□□□ -0.66
THBS3-211ENST00000541990 LRP10Q7Z4F1 713 aa10.9□□□□□ -0.66
THBS3-211ENST00000541990 PPP1R42Q7Z4L9 355 aa10.9□□□□□ -0.66
THBS3-211ENST00000541990 ANKRD7Q92527 254 aa10.9□□□□□ -0.66
THBS3-211ENST00000541990 ZBTB1Q9Y2K1 713 aa10.9□□□□□ -0.66
THBS3-211ENST00000541990 HEG1Q9ULI3 1381 aa10.9□□□□□ -0.66
THBS3-211ENST00000541990 LRRC37A3O60309 1634 aa10.9□□□□□ -0.67
THBS3-211ENST00000541990 GNAI2P04899 355 aa10.89□□□□□ -0.67
THBS3-211ENST00000541990 SYT1P21579 422 aa10.89□□□□□ -0.67
THBS3-211ENST00000541990 PTGS1P23219 599 aa10.89□□□□□ -0.67
THBS3-211ENST00000541990 MCCP23508 829 aa10.89□□□□□ -0.67
THBS3-211ENST00000541990 LRMPQ12912 555 aa10.89□□□□□ -0.67
THBS3-211ENST00000541990 NKX1-1Q15270 411 aaPredicted RBP10.89□□□□□ -0.67
THBS3-211ENST00000541990 AHDC1Q5TGY3 1603 aaPredicted RBP10.89□□□□□ -0.67
THBS3-211ENST00000541990 TMEM87AQ8NBN3 555 aa10.89□□□□□ -0.67
THBS3-211ENST00000541990 CHMP3Q9Y3E7 222 aa10.89□□□□□ -0.67
THBS3-211ENST00000541990 BCL9LQ86UU0 1499 aa10.89□□□□□ -0.67
THBS3-211ENST00000541990 JCADQ9P266 1359 aa10.89□□□□□ -0.67
THBS3-211ENST00000541990 SRGAP3O43295 1099 aa10.89□□□□□ -0.67
THBS3-211ENST00000541990 DNM1Q05193 864 aaKnown RBP10.89□□□□□ -0.67
THBS3-211ENST00000541990 RASEFQ8IZ41 740 aa10.89□□□□□ -0.67
THBS3-211ENST00000541990 SUCLG2Q96I99 432 aa10.89□□□□□ -0.67
THBS3-211ENST00000541990 GTPBP4Q9BZE4 634 aaKnown RBP10.89□□□□□ -0.67
THBS3-211ENST00000541990 BABAM1Q9NWV8 329 aa10.89□□□□□ -0.67
THBS3-211ENST00000541990 ZSCAN22P10073 491 aaPredicted RBP10.88□□□□□ -0.67
THBS3-211ENST00000541990 NCBP1Q09161 790 aaKnown RBP10.88□□□□□ -0.67
THBS3-211ENST00000541990 HLFQ16534 295 aa10.88□□□□□ -0.67
THBS3-211ENST00000541990 UBE3BQ7Z3V4 1068 aa10.88□□□□□ -0.67
THBS3-211ENST00000541990 ZBTB22O15209 634 aa10.88□□□□□ -0.67
THBS3-211ENST00000541990 AK2P54819 239 aa10.88□□□□□ -0.67
THBS3-211ENST00000541990 RUFY3Q7L099 469 aa10.88□□□□□ -0.67
THBS3-211ENST00000541990 NUTM1Q86Y26 1132 aa10.88□□□□□ -0.67
THBS3-211ENST00000541990 HMMRO75330 724 aa10.88□□□□□ -0.67
THBS3-211ENST00000541990 ANAPC15P60006 121 aa10.88□□□□□ -0.67
THBS3-211ENST00000541990 UBE2HP62256 183 aa10.88□□□□□ -0.67
THBS3-211ENST00000541990 KAZALD1Q96I82 304 aa10.88□□□□□ -0.67
THBS3-211ENST00000541990 LRRCC1Q9C099 1032 aa10.88□□□□□ -0.67
THBS3-211ENST00000541990 HYPKQ9NX55 129 aa10.88□□□□□ -0.67
THBS3-211ENST00000541990 NRBP1Q9UHY1 535 aa10.88□□□□□ -0.67
THBS3-211ENST00000541990 STX6O43752 255 aa10.87□□□□□ -0.67
THBS3-211ENST00000541990 SURF6O75683 361 aaKnown RBP10.87□□□□□ -0.67
THBS3-211ENST00000541990 F13A1P00488 732 aa10.87□□□□□ -0.67
THBS3-211ENST00000541990 ATP6V1AP38606 617 aa10.87□□□□□ -0.67
THBS3-211ENST00000541990 CCDC24Q8N4L8 307 aa10.87□□□□□ -0.67
THBS3-211ENST00000541990 C16orf45Q96MC5 204 aaPredicted RBP10.87□□□□□ -0.67
THBS3-211ENST00000541990 SOS1Q07889 1333 aaPredicted RBP10.87□□□□□ -0.67
THBS3-211ENST00000541990 HSPA4P34932 840 aa10.87□□□□□ -0.67
THBS3-211ENST00000541990 ITPK1Q13572 414 aa10.87□□□□□ -0.67
THBS3-211ENST00000541990 COL9A3Q14050 684 aaPredicted RBP10.87□□□□□ -0.67
THBS3-211ENST00000541990 FAM173BQ6P4H8 233 aa10.87□□□□□ -0.67
THBS3-211ENST00000541990 BICC1Q9H694 974 aaKnown RBP10.87□□□□□ -0.67
THBS3-211ENST00000541990 CTIFO43310 598 aaKnown RBP10.86□□□□□ -0.67
THBS3-211ENST00000541990 CAMK4Q16566 473 aa10.86□□□□□ -0.67
THBS3-211ENST00000541990 LUZP1Q86V48 1076 aa10.86□□□□□ -0.67
THBS3-211ENST00000541990 TTC14Q96N46 770 aa10.86□□□□□ -0.67
THBS3-211ENST00000541990 QTRT2Q9H974 415 aaKnown RBP10.86□□□□□ -0.67
THBS3-211ENST00000541990 SNX14Q9Y5W7 946 aa10.86□□□□□ -0.67
THBS3-211ENST00000541990 TUBGCP6Q96RT7 1819 aa10.86□□□□□ -0.67
THBS3-211ENST00000541990 KIF20AO95235 890 aa10.86□□□□□ -0.67
THBS3-211ENST00000541990 HOXB7P09629 217 aa10.86□□□□□ -0.67
THBS3-211ENST00000541990 CCDC83Q8IWF9 413 aa10.86□□□□□ -0.67
THBS3-211ENST00000541990 DISP2A7MBM2 1401 aa10.86□□□□□ -0.67
THBS3-211ENST00000541990 A0A087WZG4 1122 aa10.85□□□□□ -0.67
THBS3-211ENST00000541990 NEURL1BA8MQ27 555 aa10.85□□□□□ -0.67
THBS3-211ENST00000541990 ST3GAL1Q11201 340 aa10.85□□□□□ -0.67
THBS3-211ENST00000541990 AMIGO3Q86WK7 504 aa10.85□□□□□ -0.67
THBS3-211ENST00000541990 LETM1O95202 739 aaPredicted RBP10.85□□□□□ -0.67
THBS3-211ENST00000541990 FAM89AQ96GI7 184 aa10.85□□□□□ -0.67
THBS3-211ENST00000541990 CCDC186Q7Z3E2 898 aa10.85□□□□□ -0.67
THBS3-211ENST00000541990 SEPT12Q8IYM1 358 aa10.85□□□□□ -0.67
THBS3-211ENST00000541990 FNBP4Q8N3X1 1017 aaPredicted RBP10.85□□□□□ -0.67
THBS3-211ENST00000541990 DIAPH3Q9NSV4 1193 aa10.85□□□□□ -0.67
THBS3-211ENST00000541990 CGNQ9P2M7 1197 aaKnown RBP10.85□□□□□ -0.67
THBS3-211ENST00000541990 SLIT2O94813 1529 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 GRM8O00222 908 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 LIG1P18858 919 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 FGD1P98174 961 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 BICDL1Q6ZP65 573 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 CKAP2LQ8IYA6 745 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 ZNF594Q96JF6 807 aaPredicted RBP10.84□□□□□ -0.67
THBS3-211ENST00000541990 GJD4Q96KN9 370 aaPredicted RBP10.84□□□□□ -0.67
THBS3-211ENST00000541990 MTMR6Q9Y217 621 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 NDUFB9Q9Y6M9 179 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 KDM3BQ7LBC6 1761 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 C5P01031 1676 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 LOC102724428A0A0B4J2F2 783 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 GNAI3P08754 354 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 GJB2P29033 226 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 GTF2E1P29083 439 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms