RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 SPINK5Q9NQ38 1064 aaPredicted RBP28.31■■■□□ 2.12
C2CD3-216ENST00000541922 ZNF541Q9H0D2 1346 aa28.3■■■□□ 2.12
C2CD3-216ENST00000541922 FZD9O00144 591 aa28.3■■■□□ 2.12
C2CD3-216ENST00000541922 VAMP4O75379 141 aa28.3■■■□□ 2.12
C2CD3-216ENST00000541922 PCCAP05165 728 aaPredicted RBP28.3■■■□□ 2.12
C2CD3-216ENST00000541922 NEXNQ0ZGT2 675 aa28.3■■■□□ 2.12
C2CD3-216ENST00000541922 TMC4Q7Z404 712 aa28.3■■■□□ 2.12
C2CD3-216ENST00000541922 LARGE2Q8N3Y3 721 aa28.3■■■□□ 2.12
C2CD3-216ENST00000541922 APLP1P51693 650 aa28.28■■■□□ 2.12
C2CD3-216ENST00000541922 SUPT20HQ8NEM7 779 aa28.28■■■□□ 2.12
C2CD3-216ENST00000541922 IQCA1LA6NCM1 817 aa28.27■■■□□ 2.12
C2CD3-216ENST00000541922 FLIIQ13045 1269 aa28.27■■■□□ 2.12
C2CD3-216ENST00000541922 DPP8Q6V1X1 898 aaPredicted RBP28.27■■■□□ 2.12
C2CD3-216ENST00000541922 MPNDQ8N594 471 aa28.27■■■□□ 2.12
C2CD3-216ENST00000541922 L3MBTL3Q96JM7 780 aaPredicted RBP28.27■■■□□ 2.12
C2CD3-216ENST00000541922 SCN4AP35499 1836 aa28.27■■■□□ 2.12
C2CD3-216ENST00000541922 PPIP5K2O43314 1243 aa28.26■■■□□ 2.11
C2CD3-216ENST00000541922 EIF6P56537 245 aaKnown RBP28.26■■■□□ 2.11
C2CD3-216ENST00000541922 JARID2Q92833 1246 aaPredicted RBP28.26■■■□□ 2.11
C2CD3-216ENST00000541922 CELF1Q92879 486 aaKnown RBP28.26■■■□□ 2.11
C2CD3-216ENST00000541922 VPS33BQ9H267 617 aa28.26■■■□□ 2.11
C2CD3-216ENST00000541922 COL4A5P29400 1685 aa28.26■■■□□ 2.11
C2CD3-216ENST00000541922 IGKV5-2P06315 115 aa28.25■■■□□ 2.11
C2CD3-216ENST00000541922 FKBP5Q13451 457 aaPredicted RBP28.25■■■□□ 2.11
C2CD3-216ENST00000541922 NIM1KQ8IY84 436 aa28.25■■■□□ 2.11
C2CD3-216ENST00000541922 RTFDC1Q9BY42 306 aaPredicted RBP28.25■■■□□ 2.11
C2CD3-216ENST00000541922 PDE8AO60658 829 aa28.24■■■□□ 2.11
C2CD3-216ENST00000541922 LRRC37AA6NMS7 1700 aa28.23■■■□□ 2.11
C2CD3-216ENST00000541922 ZNF521Q96K83 1311 aa28.23■■■□□ 2.11
C2CD3-216ENST00000541922 AOC3Q16853 763 aa28.23■■■□□ 2.11
C2CD3-216ENST00000541922 GPC2Q8N158 579 aa28.23■■■□□ 2.11
C2CD3-216ENST00000541922 CDHR2Q9BYE9 1310 aa28.22■■■□□ 2.11
C2CD3-216ENST00000541922 CWF19L2Q2TBE0 894 aaKnown RBP28.22■■■□□ 2.11
C2CD3-216ENST00000541922 CCDC152Q4G0S7 254 aa28.22■■■□□ 2.11
C2CD3-216ENST00000541922 NEURL1BA8MQ27 555 aa28.21■■■□□ 2.11
C2CD3-216ENST00000541922 RPS8P62241 208 aaKnown RBP28.21■■■□□ 2.11
C2CD3-216ENST00000541922 GJA3Q9Y6H8 435 aa28.21■■■□□ 2.11
C2CD3-216ENST00000541922 DNAAF4Q8WXU2 420 aa28.2■■■□□ 2.1
C2CD3-216ENST00000541922 TAF1DQ9H5J8 278 aaPredicted RBP28.2■■■□□ 2.1
C2CD3-216ENST00000541922 HACL1Q9UJ83 578 aa28.2■■■□□ 2.1
C2CD3-216ENST00000541922 CCER2I3L3R5 266 aa28.19■■■□□ 2.1
C2CD3-216ENST00000541922 SEC31BQ9NQW1 1179 aa28.19■■■□□ 2.1
C2CD3-216ENST00000541922 NSFL1CQ9UNZ2 370 aaKnown RBP28.19■■■□□ 2.1
C2CD3-216ENST00000541922 COL4A1P02462 1669 aa28.19■■■□□ 2.1
C2CD3-216ENST00000541922 KIAA2012Q0VF49 1180 aa28.18■■■□□ 2.1
C2CD3-216ENST00000541922 CCDC85AQ96PX6 553 aaPredicted RBP28.18■■■□□ 2.1
C2CD3-216ENST00000541922 MYH3P11055 1940 aa28.18■■■□□ 2.1
C2CD3-216ENST00000541922 CHADLQ6NUI6 762 aa28.17■■■□□ 2.1
C2CD3-216ENST00000541922 ZNRF3Q9ULT6 936 aa28.17■■■□□ 2.1
C2CD3-216ENST00000541922 POTEIP0CG38 1075 aa28.16■■■□□ 2.1
C2CD3-216ENST00000541922 POTEJP0CG39 1038 aa28.16■■■□□ 2.1
C2CD3-216ENST00000541922 EPHX2P34913 555 aa28.16■■■□□ 2.1
C2CD3-216ENST00000541922 LINS1Q8NG48 757 aa28.16■■■□□ 2.1
C2CD3-216ENST00000541922 DUOX1Q9NRD9 1551 aa28.16■■■□□ 2.1
C2CD3-216ENST00000541922 CTSWP56202 376 aa28.15■■■□□ 2.1
C2CD3-216ENST00000541922 GCKRQ14397 625 aa28.15■■■□□ 2.1
C2CD3-216ENST00000541922 EAPPQ56P03 285 aaPredicted RBP28.15■■■□□ 2.1
C2CD3-216ENST00000541922 UBE3BQ7Z3V4 1068 aa28.15■■■□□ 2.1
C2CD3-216ENST00000541922 H7C1W4 665 aa28.14■■■□□ 2.1
C2CD3-216ENST00000541922 GPSM2P81274 684 aa28.14■■■□□ 2.1
C2CD3-216ENST00000541922 LDHDQ86WU2 507 aa28.14■■■□□ 2.1
C2CD3-216ENST00000541922 E9PSI1 815 aa28.13■■■□□ 2.09
C2CD3-216ENST00000541922 C6orf229H3BNL8 230 aa28.13■■■□□ 2.09
C2CD3-216ENST00000541922 LMOD1P29536 600 aaPredicted RBP28.13■■■□□ 2.09
C2CD3-216ENST00000541922 PNMA8AQ86V59 439 aaPredicted RBP28.13■■■□□ 2.09
C2CD3-216ENST00000541922 HTRA3P83110 453 aa28.12■■■□□ 2.09
C2CD3-216ENST00000541922 CXCL9Q07325 125 aa28.12■■■□□ 2.09
C2CD3-216ENST00000541922 WASHC4Q2M389 1173 aa28.12■■■□□ 2.09
C2CD3-216ENST00000541922 ANKRD18AQ8IVF6 992 aa28.12■■■□□ 2.09
C2CD3-216ENST00000541922 TTLL11Q8NHH1 800 aa28.12■■■□□ 2.09
C2CD3-216ENST00000541922 F6X3S4 739 aa28.11■■■□□ 2.09
C2CD3-216ENST00000541922 CDC5LQ99459 802 aaKnown RBP28.11■■■□□ 2.09
C2CD3-216ENST00000541922 POLLQ9UGP5 575 aa28.11■■■□□ 2.09
C2CD3-216ENST00000541922 CLEC11AQ9Y240 323 aa28.11■■■□□ 2.09
C2CD3-216ENST00000541922 LTBP1Q14766 1721 aa28.1■■■□□ 2.09
C2CD3-216ENST00000541922 SCNN1DP51172 638 aa28.1■■■□□ 2.09
C2CD3-216ENST00000541922 EYA3Q99504 573 aa28.1■■■□□ 2.09
C2CD3-216ENST00000541922 CIAPIN1Q6FI81 312 aa28.09■■■□□ 2.09
C2CD3-216ENST00000541922 DNAJC5GQ8N7S2 189 aa28.09■■■□□ 2.09
C2CD3-216ENST00000541922 TBC1D16Q8TBP0 767 aa28.09■■■□□ 2.09
C2CD3-216ENST00000541922 PODXL2Q9NZ53 605 aa28.09■■■□□ 2.09
C2CD3-216ENST00000541922 ANKIB1Q9P2G1 1089 aa28.09■■■□□ 2.09
C2CD3-216ENST00000541922 CEP350Q5VT06 3117 aa28.08■■■□□ 2.09
C2CD3-216ENST00000541922 RIMBP2O15034 1052 aa28.08■■■□□ 2.09
C2CD3-216ENST00000541922 SLFN5Q08AF3 891 aa28.08■■■□□ 2.09
C2CD3-216ENST00000541922 PLA2G12BQ9BX93 195 aa28.08■■■□□ 2.09
C2CD3-216ENST00000541922 GREM2Q9H772 168 aa28.08■■■□□ 2.09
C2CD3-216ENST00000541922 RTL9Q8NET4 1388 aa28.08■■■□□ 2.09
C2CD3-216ENST00000541922 RAD17O75943 681 aa28.07■■■□□ 2.08
C2CD3-216ENST00000541922 CASP7P55210 303 aa28.07■■■□□ 2.08
C2CD3-216ENST00000541922 TNIP1Q15025 636 aa28.07■■■□□ 2.08
C2CD3-216ENST00000541922 BEND3Q5T5X7 828 aa28.07■■■□□ 2.08
C2CD3-216ENST00000541922 ADAMTSL1Q8N6G6 1762 aa28.06■■■□□ 2.08
C2CD3-216ENST00000541922 UFL1O94874 794 aa28.06■■■□□ 2.08
C2CD3-216ENST00000541922 EPS15P42566 896 aa28.06■■■□□ 2.08
C2CD3-216ENST00000541922 GGA1Q9UJY5 639 aa28.06■■■□□ 2.08
C2CD3-216ENST00000541922 SPEF2Q9C093 1822 aa28.06■■■□□ 2.08
C2CD3-216ENST00000541922 YDJCA8MPS7 323 aa28.05■■■□□ 2.08
C2CD3-216ENST00000541922 GPR101Q96P66 508 aaPredicted RBP28.05■■■□□ 2.08
C2CD3-216ENST00000541922 ZC3H12CQ9C0D7 883 aaKnown RBP28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms