RNA–Protein interactions for RNA: ENST00000541453.1

GABARAPL1-209, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-209ENST00000541453 CCDC136Q96JN2 1154 aa13.59□□□□□ -0.23
GABARAPL1-209ENST00000541453 RWDD1Q9H446 243 aaPredicted RBP13.59□□□□□ -0.23
GABARAPL1-209ENST00000541453 PCDHB15Q9Y5E8 787 aa13.59□□□□□ -0.23
GABARAPL1-209ENST00000541453 PSDA5PKW4 1024 aaPredicted RBP13.58□□□□□ -0.24
GABARAPL1-209ENST00000541453 HCLS1P14317 486 aaPredicted RBP13.58□□□□□ -0.24
GABARAPL1-209ENST00000541453 FOXO4P98177 505 aa13.58□□□□□ -0.24
GABARAPL1-209ENST00000541453 MTX1Q13505 466 aa13.58□□□□□ -0.24
GABARAPL1-209ENST00000541453 RABL6Q3YEC7 729 aaPredicted RBP13.58□□□□□ -0.24
GABARAPL1-209ENST00000541453 PRR5LQ6MZQ0 368 aa13.58□□□□□ -0.24
GABARAPL1-209ENST00000541453 NLRP3Q96P20 1036 aa13.58□□□□□ -0.24
GABARAPL1-209ENST00000541453 SRGAP3O43295 1099 aa13.57□□□□□ -0.24
GABARAPL1-209ENST00000541453 ZBTB7AO95365 584 aa13.57□□□□□ -0.24
GABARAPL1-209ENST00000541453 POLD1P28340 1107 aa13.57□□□□□ -0.24
GABARAPL1-209ENST00000541453 CTSWP56202 376 aa13.57□□□□□ -0.24
GABARAPL1-209ENST00000541453 EPHA10Q5JZY3 1008 aa13.57□□□□□ -0.24
GABARAPL1-209ENST00000541453 LMBR1LQ6UX01 489 aa13.57□□□□□ -0.24
GABARAPL1-209ENST00000541453 CHMP3Q9Y3E7 222 aa13.57□□□□□ -0.24
GABARAPL1-209ENST00000541453 RIC1Q4ADV7 1423 aa13.56□□□□□ -0.24
GABARAPL1-209ENST00000541453 CSF1RP07333 972 aa13.56□□□□□ -0.24
GABARAPL1-209ENST00000541453 HDAC1Q13547 482 aaPredicted RBP13.56□□□□□ -0.24
GABARAPL1-209ENST00000541453 CCDC152Q4G0S7 254 aa13.56□□□□□ -0.24
GABARAPL1-209ENST00000541453 TTLL11Q8NHH1 800 aa13.56□□□□□ -0.24
GABARAPL1-209ENST00000541453 PNMA6EA0A0J9YXQ4 647 aa13.55□□□□□ -0.24
GABARAPL1-209ENST00000541453 SF3B3Q15393 1217 aaKnown RBP13.55□□□□□ -0.24
GABARAPL1-209ENST00000541453 CCDC57Q2TAC2 916 aa13.55□□□□□ -0.24
GABARAPL1-209ENST00000541453 SSH3Q8TE77 659 aa13.55□□□□□ -0.24
GABARAPL1-209ENST00000541453 BRIP1Q9BX63 1249 aa13.55□□□□□ -0.24
GABARAPL1-209ENST00000541453 ABCC12Q96J65 1359 aa13.55□□□□□ -0.24
GABARAPL1-209ENST00000541453 ANKRD31Q8N7Z5 1873 aa13.55□□□□□ -0.24
GABARAPL1-209ENST00000541453 PDE6BP35913 854 aa13.54□□□□□ -0.24
GABARAPL1-209ENST00000541453 IFIT5Q13325 482 aaKnown RBP13.54□□□□□ -0.24
GABARAPL1-209ENST00000541453 SIRT2Q8IXJ6 389 aa13.54□□□□□ -0.24
GABARAPL1-209ENST00000541453 CCDC24Q8N4L8 307 aa13.54□□□□□ -0.24
GABARAPL1-209ENST00000541453 TNRC6CQ9HCJ0 1690 aaKnown RBP13.53□□□□□ -0.24
GABARAPL1-209ENST00000541453 ANKRD18BA2A2Z9 1011 aa13.53□□□□□ -0.24
GABARAPL1-209ENST00000541453 B4GALNT3Q6L9W6 998 aa13.53□□□□□ -0.24
GABARAPL1-209ENST00000541453 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
GABARAPL1-209ENST00000541453 CCDC85AQ96PX6 553 aaPredicted RBP13.53□□□□□ -0.24
GABARAPL1-209ENST00000541453 PDZRN3Q9UPQ7 1066 aa13.53□□□□□ -0.24
GABARAPL1-209ENST00000541453 RTL9Q8NET4 1388 aa13.53□□□□□ -0.24
GABARAPL1-209ENST00000541453 CAPN15O75808 1086 aa13.52□□□□□ -0.25
GABARAPL1-209ENST00000541453 IGHDP01880 384 aa13.52□□□□□ -0.25
GABARAPL1-209ENST00000541453 ITGA6P23229 1130 aa13.52□□□□□ -0.25
GABARAPL1-209ENST00000541453 FAM161AQ3B820 660 aa13.52□□□□□ -0.25
GABARAPL1-209ENST00000541453 HSP90AB4PQ58FF6 505 aa13.52□□□□□ -0.25
GABARAPL1-209ENST00000541453 TAF7LQ5H9L4 462 aa13.52□□□□□ -0.25
GABARAPL1-209ENST00000541453 DDX46Q7L014 1031 aaKnown RBP13.52□□□□□ -0.25
GABARAPL1-209ENST00000541453 RPGRQ92834 1020 aaKnown RBP13.52□□□□□ -0.25
GABARAPL1-209ENST00000541453 GCC1Q96CN9 775 aa13.52□□□□□ -0.25
GABARAPL1-209ENST00000541453 GREM2Q9H772 168 aa13.52□□□□□ -0.25
GABARAPL1-209ENST00000541453 SPON1Q9HCB6 807 aa13.52□□□□□ -0.25
GABARAPL1-209ENST00000541453 KIF13BQ9NQT8 1826 aa13.52□□□□□ -0.25
GABARAPL1-209ENST00000541453 KLRG2A4D1S0 409 aaPredicted RBP13.51□□□□□ -0.25
GABARAPL1-209ENST00000541453 SURF6O75683 361 aaKnown RBP13.51□□□□□ -0.25
GABARAPL1-209ENST00000541453 CENPQQ7L2Z9 268 aaPredicted RBP13.51□□□□□ -0.25
GABARAPL1-209ENST00000541453 RBM17Q96I25 401 aaKnown RBP13.51□□□□□ -0.25
GABARAPL1-209ENST00000541453 CDC5LQ99459 802 aaKnown RBP13.51□□□□□ -0.25
GABARAPL1-209ENST00000541453 DCTPP1Q9H773 170 aa13.51□□□□□ -0.25
GABARAPL1-209ENST00000541453 COPRSQ9NQ92 184 aa13.51□□□□□ -0.25
GABARAPL1-209ENST00000541453 SPEF2Q9C093 1822 aa13.5□□□□□ -0.25
GABARAPL1-209ENST00000541453 IGHMBP2P38935 993 aaKnown RBP13.5□□□□□ -0.25
GABARAPL1-209ENST00000541453 RFX5P48382 616 aaPredicted RBP13.5□□□□□ -0.25
GABARAPL1-209ENST00000541453 PTPN12Q05209 780 aaKnown RBP13.5□□□□□ -0.25
GABARAPL1-209ENST00000541453 G3BP1Q13283 466 aaKnown RBP eCLIP13.5□□□□□ -0.25
GABARAPL1-209ENST00000541453 CRY2Q49AN0 593 aa13.5□□□□□ -0.25
GABARAPL1-209ENST00000541453 C3orf67Q6ZVT6 689 aa13.5□□□□□ -0.25
GABARAPL1-209ENST00000541453 NOP58Q9Y2X3 529 aaKnown RBP13.5□□□□□ -0.25
GABARAPL1-209ENST00000541453 TAF1P21675 1872 aa13.49□□□□□ -0.25
GABARAPL1-209ENST00000541453 H0YIN7 160 aa13.49□□□□□ -0.25
GABARAPL1-209ENST00000541453 RAB11FIP3O75154 756 aa13.49□□□□□ -0.25
GABARAPL1-209ENST00000541453 OS9Q13438 667 aaPredicted RBP13.49□□□□□ -0.25
GABARAPL1-209ENST00000541453 ERC1Q8IUD2 1116 aa13.49□□□□□ -0.25
GABARAPL1-209ENST00000541453 ANKRD18AQ8IVF6 992 aa13.49□□□□□ -0.25
GABARAPL1-209ENST00000541453 MPHOSPH8Q99549 860 aa13.49□□□□□ -0.25
GABARAPL1-209ENST00000541453 SGIP1Q9BQI5 828 aa13.49□□□□□ -0.25
GABARAPL1-209ENST00000541453 ZBTB47Q9UFB7 747 aaPredicted RBP13.49□□□□□ -0.25
GABARAPL1-209ENST00000541453 C10orf71Q711Q0 1435 aa13.48□□□□□ -0.25
GABARAPL1-209ENST00000541453 KDM2BQ8NHM5 1336 aa13.48□□□□□ -0.25
GABARAPL1-209ENST00000541453 NPR1P16066 1061 aa13.48□□□□□ -0.25
GABARAPL1-209ENST00000541453 ALDH1B1P30837 517 aa13.48□□□□□ -0.25
GABARAPL1-209ENST00000541453 HOXA10P31260 410 aaPredicted RBP13.48□□□□□ -0.25
GABARAPL1-209ENST00000541453 PTGER2P43116 358 aa13.48□□□□□ -0.25
GABARAPL1-209ENST00000541453 LDHAL6AQ6ZMR3 332 aa13.48□□□□□ -0.25
GABARAPL1-209ENST00000541453 C2CD5Q86YS7 1000 aa13.48□□□□□ -0.25
GABARAPL1-209ENST00000541453 SMC5Q8IY18 1101 aa13.48□□□□□ -0.25
GABARAPL1-209ENST00000541453 KLHDC4Q8TBB5 520 aa13.48□□□□□ -0.25
GABARAPL1-209ENST00000541453 MASTLQ96GX5 879 aa13.48□□□□□ -0.25
GABARAPL1-209ENST00000541453 ZNF594Q96JF6 807 aaPredicted RBP13.48□□□□□ -0.25
GABARAPL1-209ENST00000541453 SEC31BQ9NQW1 1179 aa13.48□□□□□ -0.25
GABARAPL1-209ENST00000541453 PA2G4Q9UQ80 394 aaKnown RBP13.48□□□□□ -0.25
GABARAPL1-209ENST00000541453 EXOC6BQ9Y2D4 811 aa13.48□□□□□ -0.25
GABARAPL1-209ENST00000541453 DLEC1Q9Y238 1755 aa13.48□□□□□ -0.25
GABARAPL1-209ENST00000541453 COL11A2P13942 1736 aaPredicted RBP13.47□□□□□ -0.25
GABARAPL1-209ENST00000541453 CACNA1SQ13698 1873 aa13.47□□□□□ -0.25
GABARAPL1-209ENST00000541453 EYA2O00167 538 aa13.47□□□□□ -0.25
GABARAPL1-209ENST00000541453 CIAO1O76071 339 aa13.47□□□□□ -0.25
GABARAPL1-209ENST00000541453 SRGNP10124 158 aa13.47□□□□□ -0.25
GABARAPL1-209ENST00000541453 IL15P40933 162 aaPredicted RBP13.47□□□□□ -0.25
GABARAPL1-209ENST00000541453 RPS8P62241 208 aaKnown RBP13.47□□□□□ -0.25
GABARAPL1-209ENST00000541453 GRAPQ13588 217 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms