RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 NUDCQ9Y266 331 aa15.7■□□□□ 0.1
COPA-205ENST00000541366 SOX10P56693 466 aa15.69■□□□□ 0.1
COPA-205ENST00000541366 HUNKP57058 714 aa15.69■□□□□ 0.1
COPA-205ENST00000541366 GIGYF2Q6Y7W6 1299 aaKnown RBP15.69■□□□□ 0.1
COPA-205ENST00000541366 NLRP3Q96P20 1036 aa15.69■□□□□ 0.1
COPA-205ENST00000541366 RTFDC1Q9BY42 306 aaPredicted RBP15.69■□□□□ 0.1
COPA-205ENST00000541366 KDM3BQ7LBC6 1761 aa15.69■□□□□ 0.1
COPA-205ENST00000541366 YDJCA8MPS7 323 aa15.68■□□□□ 0.1
COPA-205ENST00000541366 NOGQ13253 232 aa15.68■□□□□ 0.1
COPA-205ENST00000541366 DPP8Q6V1X1 898 aaPredicted RBP15.68■□□□□ 0.1
COPA-205ENST00000541366 CDC37L1Q7L3B6 337 aa15.68■□□□□ 0.1
COPA-205ENST00000541366 CNOT7Q9UIV1 285 aaKnown RBP15.68■□□□□ 0.1
COPA-205ENST00000541366 ZBTB12Q9Y330 459 aaPredicted RBP15.68■□□□□ 0.1
COPA-205ENST00000541366 TAF1P21675 1872 aa15.67■□□□□ 0.1
COPA-205ENST00000541366 DLG5Q8TDM6 1919 aa15.67■□□□□ 0.1
COPA-205ENST00000541366 HCLS1P14317 486 aaPredicted RBP15.67■□□□□ 0.1
COPA-205ENST00000541366 PPP2R1AP30153 589 aa15.67■□□□□ 0.1
COPA-205ENST00000541366 KIAA2012Q0VF49 1180 aa15.67■□□□□ 0.1
COPA-205ENST00000541366 PPP1R42Q7Z4L9 355 aa15.67■□□□□ 0.1
COPA-205ENST00000541366 ZC3H15Q8WU90 426 aaKnown RBP15.67■□□□□ 0.1
COPA-205ENST00000541366 ZNF428Q96B54 188 aa15.67■□□□□ 0.1
COPA-205ENST00000541366 TMX4Q9H1E5 349 aaPredicted RBP15.67■□□□□ 0.1
COPA-205ENST00000541366 VPS33BQ9H267 617 aa15.67■□□□□ 0.1
COPA-205ENST00000541366 POLR2AP24928 1970 aaKnown RBP15.67■□□□□ 0.1
COPA-205ENST00000541366 FAM155AB1AL88 458 aaPredicted RBP15.66■□□□□ 0.1
COPA-205ENST00000541366 EGFRP00533 1210 aa15.66■□□□□ 0.1
COPA-205ENST00000541366 ANXA1P04083 346 aa15.66■□□□□ 0.1
COPA-205ENST00000541366 SLC10A5Q5PT55 438 aa15.66■□□□□ 0.1
COPA-205ENST00000541366 SAMD7Q7Z3H4 446 aa15.66■□□□□ 0.1
COPA-205ENST00000541366 MICALL2Q8IY33 904 aa15.66■□□□□ 0.1
COPA-205ENST00000541366 MPNDQ8N594 471 aa15.66■□□□□ 0.1
COPA-205ENST00000541366 SUPT20HQ8NEM7 779 aa15.66■□□□□ 0.1
COPA-205ENST00000541366 CCER1Q8TC90 406 aaPredicted RBP15.66■□□□□ 0.1
COPA-205ENST00000541366 UTP14AQ9BVJ6 771 aaKnown RBP15.66■□□□□ 0.1
COPA-205ENST00000541366 LAMB2P55268 1798 aa15.66■□□□□ 0.1
COPA-205ENST00000541366 TNIP1Q15025 636 aa15.65■□□□□ 0.1
COPA-205ENST00000541366 PROSER3Q2NL68 480 aa15.65■□□□□ 0.1
COPA-205ENST00000541366 PARP10Q53GL7 1025 aa15.65■□□□□ 0.1
COPA-205ENST00000541366 LRP10Q7Z4F1 713 aa15.65■□□□□ 0.1
COPA-205ENST00000541366 SP8Q8IXZ3 490 aa15.65■□□□□ 0.1
COPA-205ENST00000541366 CDHR2Q9BYE9 1310 aa15.65■□□□□ 0.1
COPA-205ENST00000541366 H7C1D1 291 aa15.64■□□□□ 0.09
COPA-205ENST00000541366 TRPA1O75762 1119 aa15.64■□□□□ 0.09
COPA-205ENST00000541366 BBOX1O75936 387 aa15.64■□□□□ 0.09
COPA-205ENST00000541366 KIF23Q02241 960 aaPredicted RBP15.64■□□□□ 0.09
COPA-205ENST00000541366 PDIA6Q15084 440 aa15.64■□□□□ 0.09
COPA-205ENST00000541366 TBC1D10BQ4KMP7 808 aaPredicted RBP15.64■□□□□ 0.09
COPA-205ENST00000541366 RGMBQ6NW40 437 aa15.64■□□□□ 0.09
COPA-205ENST00000541366 DUOX1Q9NRD9 1551 aa15.64■□□□□ 0.09
COPA-205ENST00000541366 ADM5C9JUS6 153 aa15.63■□□□□ 0.09
COPA-205ENST00000541366 PSMD14O00487 310 aa15.63■□□□□ 0.09
COPA-205ENST00000541366 EIF2S2P20042 333 aaKnown RBP15.63■□□□□ 0.09
COPA-205ENST00000541366 KRT26Q7Z3Y9 468 aa15.63■□□□□ 0.09
COPA-205ENST00000541366 PNISRQ8TF01 805 aaKnown RBP15.63■□□□□ 0.09
COPA-205ENST00000541366 GBA2Q9HCG7 927 aaPredicted RBP15.63■□□□□ 0.09
COPA-205ENST00000541366 KCNQ5Q9NR82 932 aa15.63■□□□□ 0.09
COPA-205ENST00000541366 RBM26Q5T8P6 1007 aaKnown RBP15.62■□□□□ 0.09
COPA-205ENST00000541366 DBNDD1Q9H9R9 158 aa15.62■□□□□ 0.09
COPA-205ENST00000541366 RNF186Q9NXI6 227 aa15.62■□□□□ 0.09
COPA-205ENST00000541366 ZNF157P51786 506 aaPredicted RBP15.61■□□□□ 0.09
COPA-205ENST00000541366 NLRP10Q86W26 655 aa15.61■□□□□ 0.09
COPA-205ENST00000541366 ANKRD36CQ5JPF3 1778 aa15.6■□□□□ 0.09
COPA-205ENST00000541366 RIMBP2O15034 1052 aa15.6■□□□□ 0.09
COPA-205ENST00000541366 AIMP1Q12904 312 aaKnown RBP15.6■□□□□ 0.09
COPA-205ENST00000541366 GRAPQ13588 217 aa15.6■□□□□ 0.09
COPA-205ENST00000541366 DDX46Q7L014 1031 aaKnown RBP15.6■□□□□ 0.09
COPA-205ENST00000541366 GRAPLQ8TC17 118 aaPredicted RBP15.6■□□□□ 0.09
COPA-205ENST00000541366 NECTIN2Q92692 538 aa15.6■□□□□ 0.09
COPA-205ENST00000541366 ASTN2O75129 1339 aaPredicted RBP15.6■□□□□ 0.09
COPA-205ENST00000541366 AKAP11Q9UKA4 1901 aa15.59■□□□□ 0.09
COPA-205ENST00000541366 C2orf69Q8N8R5 385 aa15.59■□□□□ 0.09
COPA-205ENST00000541366 DPF2Q92785 391 aa15.59■□□□□ 0.09
COPA-205ENST00000541366 CSRNP1Q96S65 589 aa15.59■□□□□ 0.09
COPA-205ENST00000541366 PLEKHF1Q96S99 279 aa15.59■□□□□ 0.09
COPA-205ENST00000541366 SAGE1Q9NXZ1 904 aa15.59■□□□□ 0.09
COPA-205ENST00000541366 TRMT112Q9UI30 125 aaKnown RBP15.59■□□□□ 0.09
COPA-205ENST00000541366 COL4A1P02462 1669 aa15.59■□□□□ 0.09
COPA-205ENST00000541366 ERBB4Q15303 1308 aa15.59■□□□□ 0.09
COPA-205ENST00000541366 NFE2L2Q16236 605 aa15.58■□□□□ 0.08
COPA-205ENST00000541366 DOK7Q18PE1 504 aa15.58■□□□□ 0.08
COPA-205ENST00000541366 WASHC4Q2M389 1173 aa15.58■□□□□ 0.08
COPA-205ENST00000541366 CCDC102AQ96A19 550 aa15.58■□□□□ 0.08
COPA-205ENST00000541366 RTL9Q8NET4 1388 aa15.58■□□□□ 0.08
COPA-205ENST00000541366 SLC10A3P09131 477 aa15.57■□□□□ 0.08
COPA-205ENST00000541366 COPS6Q7L5N1 327 aa15.57■□□□□ 0.08
COPA-205ENST00000541366 XAGE3Q8WTP9 111 aa15.57■□□□□ 0.08
COPA-205ENST00000541366 CELF1Q92879 486 aaKnown RBP15.57■□□□□ 0.08
COPA-205ENST00000541366 DCPSQ96C86 337 aaKnown RBP15.57■□□□□ 0.08
COPA-205ENST00000541366 POLLQ9UGP5 575 aa15.57■□□□□ 0.08
COPA-205ENST00000541366 TSPYL4Q9UJ04 414 aa15.57■□□□□ 0.08
COPA-205ENST00000541366 NSFL1CQ9UNZ2 370 aaKnown RBP15.57■□□□□ 0.08
COPA-205ENST00000541366 ECE2O60344 883 aa15.56■□□□□ 0.08
COPA-205ENST00000541366 CTU1Q7Z7A3 348 aaKnown RBP15.56■□□□□ 0.08
COPA-205ENST00000541366 RNF39Q9H2S5 420 aa15.56■□□□□ 0.08
COPA-205ENST00000541366 SH3TC1Q8TE82 1336 aa15.56■□□□□ 0.08
COPA-205ENST00000541366 LRRC37AA6NMS7 1700 aa15.56■□□□□ 0.08
COPA-205ENST00000541366 SCN9AQ15858 1988 aa15.55■□□□□ 0.08
COPA-205ENST00000541366 C6orf229H3BNL8 230 aa15.55■□□□□ 0.08
COPA-205ENST00000541366 NEFMP07197 916 aa15.55■□□□□ 0.08
COPA-205ENST00000541366 GPSM2P81274 684 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms