RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 ERBB3P21860 1342 aa17.53■□□□□ 0.4
AC005840.4-201ENST00000541242 EIF2S2P20042 333 aaKnown RBP17.53■□□□□ 0.4
AC005840.4-201ENST00000541242 PTPN14Q15678 1187 aa17.53■□□□□ 0.4
AC005840.4-201ENST00000541242 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.53■□□□□ 0.4
AC005840.4-201ENST00000541242 SYTL4Q96C24 671 aaPredicted RBP17.53■□□□□ 0.4
AC005840.4-201ENST00000541242 MED1Q15648 1581 aaPredicted RBP17.52■□□□□ 0.4
AC005840.4-201ENST00000541242 SLIT3O75094 1523 aa17.52■□□□□ 0.4
AC005840.4-201ENST00000541242 SSH3Q8TE77 659 aa17.52■□□□□ 0.4
AC005840.4-201ENST00000541242 CLSTN2Q9H4D0 955 aa17.52■□□□□ 0.4
AC005840.4-201ENST00000541242 ZSWIM6Q9HCJ5 1215 aa17.52■□□□□ 0.4
AC005840.4-201ENST00000541242 ZNF446Q9NWS9 450 aa17.52■□□□□ 0.4
AC005840.4-201ENST00000541242 CCDC66A2RUB6 948 aa17.52■□□□□ 0.39
AC005840.4-201ENST00000541242 BICD2Q8TD16 824 aa17.52■□□□□ 0.39
AC005840.4-201ENST00000541242 ANKRD24Q8TF21 1146 aa17.52■□□□□ 0.39
AC005840.4-201ENST00000541242 PGBD1Q96JS3 809 aa17.52■□□□□ 0.39
AC005840.4-201ENST00000541242 USP16Q9Y5T5 823 aa17.52■□□□□ 0.39
AC005840.4-201ENST00000541242 PXDNQ92626 1479 aa17.51■□□□□ 0.39
AC005840.4-201ENST00000541242 TRPM3Q9HCF6 1732 aaPredicted RBP17.51■□□□□ 0.39
AC005840.4-201ENST00000541242 SKILP12757 684 aa17.51■□□□□ 0.39
AC005840.4-201ENST00000541242 LARP1Q6PKG0 1096 aaKnown RBP17.51■□□□□ 0.39
AC005840.4-201ENST00000541242 FILIP1Q7Z7B0 1213 aa17.51■□□□□ 0.39
AC005840.4-201ENST00000541242 LEO1Q8WVC0 666 aaPredicted RBP17.51■□□□□ 0.39
AC005840.4-201ENST00000541242 ZSCAN31Q96LW9 406 aaPredicted RBP17.51■□□□□ 0.39
AC005840.4-201ENST00000541242 SH2B1Q9NRF2 756 aaPredicted RBP17.51■□□□□ 0.39
AC005840.4-201ENST00000541242 STK3Q13188 491 aa17.5■□□□□ 0.39
AC005840.4-201ENST00000541242 AKAP4Q5JQC9 854 aa17.5■□□□□ 0.39
AC005840.4-201ENST00000541242 C11orf57Q6ZUT1 292 aaPredicted RBP17.5■□□□□ 0.39
AC005840.4-201ENST00000541242 NYAP1Q6ZVC0 841 aa17.5■□□□□ 0.39
AC005840.4-201ENST00000541242 KLHL34Q8N239 644 aa17.5■□□□□ 0.39
AC005840.4-201ENST00000541242 TIGD1Q96MW7 591 aa17.5■□□□□ 0.39
AC005840.4-201ENST00000541242 FAM53CQ9NYF3 392 aa17.5■□□□□ 0.39
AC005840.4-201ENST00000541242 ELP1O95163 1332 aa17.5■□□□□ 0.39
AC005840.4-201ENST00000541242 C1orf167Q5SNV9 1468 aa17.5■□□□□ 0.39
AC005840.4-201ENST00000541242 SRGAP3O43295 1099 aa17.5■□□□□ 0.39
AC005840.4-201ENST00000541242 PLEKHO1Q53GL0 409 aaPredicted RBP17.5■□□□□ 0.39
AC005840.4-201ENST00000541242 PLCD3Q8N3E9 789 aa17.5■□□□□ 0.39
AC005840.4-201ENST00000541242 LRRN4CLQ8ND94 238 aa17.5■□□□□ 0.39
AC005840.4-201ENST00000541242 RAB11FIP3O75154 756 aa17.49■□□□□ 0.39
AC005840.4-201ENST00000541242 RBM43Q6ZSC3 357 aaKnown RBP17.49■□□□□ 0.39
AC005840.4-201ENST00000541242 DDX17Q92841 729 aaKnown RBP17.49■□□□□ 0.39
AC005840.4-201ENST00000541242 GTF3C6Q969F1 213 aa17.49■□□□□ 0.39
AC005840.4-201ENST00000541242 DDX19AQ9NUU7 478 aaKnown RBP17.49■□□□□ 0.39
AC005840.4-201ENST00000541242 ANXA1P04083 346 aa17.49■□□□□ 0.39
AC005840.4-201ENST00000541242 CHPF2Q9P2E5 772 aa17.49■□□□□ 0.39
AC005840.4-201ENST00000541242 LMO7Q8WWI1 1683 aa17.49■□□□□ 0.39
AC005840.4-201ENST00000541242 KDM3BQ7LBC6 1761 aa17.49■□□□□ 0.39
AC005840.4-201ENST00000541242 TEFQ10587 303 aa17.48■□□□□ 0.39
AC005840.4-201ENST00000541242 C19orf44Q9H6X5 657 aa17.48■□□□□ 0.39
AC005840.4-201ENST00000541242 NCAPD2Q15021 1401 aa17.48■□□□□ 0.39
AC005840.4-201ENST00000541242 CCDC69A6NI79 296 aa17.48■□□□□ 0.39
AC005840.4-201ENST00000541242 BTBD11A6QL63 1104 aa17.48■□□□□ 0.39
AC005840.4-201ENST00000541242 RNMTO43148 476 aaKnown RBP17.48■□□□□ 0.39
AC005840.4-201ENST00000541242 CAPN2P17655 700 aa17.48■□□□□ 0.39
AC005840.4-201ENST00000541242 ZC3H6P61129 1189 aaKnown RBP17.48■□□□□ 0.39
AC005840.4-201ENST00000541242 DDX11Q96FC9 970 aa17.48■□□□□ 0.39
AC005840.4-201ENST00000541242 TAF6LQ9Y6J9 622 aa17.48■□□□□ 0.39
AC005840.4-201ENST00000541242 CCDC171Q6TFL3 1326 aa17.48■□□□□ 0.39
AC005840.4-201ENST00000541242 NPHP3Q7Z494 1330 aa17.48■□□□□ 0.39
AC005840.4-201ENST00000541242 CCZ1BP86790 482 aa17.47■□□□□ 0.39
AC005840.4-201ENST00000541242 CCZ1P86791 482 aaPredicted RBP17.47■□□□□ 0.39
AC005840.4-201ENST00000541242 CEBPZQ03701 1054 aaKnown RBP17.47■□□□□ 0.39
AC005840.4-201ENST00000541242 IQCB1Q15051 598 aa17.47■□□□□ 0.39
AC005840.4-201ENST00000541242 ERCC6LQ2NKX8 1250 aa17.47■□□□□ 0.39
AC005840.4-201ENST00000541242 FBXW7Q969H0 707 aa17.47■□□□□ 0.39
AC005840.4-201ENST00000541242 KIF1BPQ96EK5 621 aa17.47■□□□□ 0.39
AC005840.4-201ENST00000541242 ERO1AQ96HE7 468 aa17.47■□□□□ 0.39
AC005840.4-201ENST00000541242 RGPD5Q99666 1765 aa17.47■□□□□ 0.39
AC005840.4-201ENST00000541242 GOLGA6L19H0YKK7 550 aa17.47■□□□□ 0.39
AC005840.4-201ENST00000541242 NBPF7P0C2Y1 421 aaPredicted RBP17.47■□□□□ 0.39
AC005840.4-201ENST00000541242 NECTIN1Q15223 517 aa17.47■□□□□ 0.39
AC005840.4-201ENST00000541242 IPO4Q8TEX9 1081 aaKnown RBP17.47■□□□□ 0.39
AC005840.4-201ENST00000541242 SCAND2PQ9GZW5 306 aaPredicted RBP17.47■□□□□ 0.39
AC005840.4-201ENST00000541242 RBM8AQ9Y5S9 174 aaKnown RBP17.47■□□□□ 0.39
AC005840.4-201ENST00000541242 N4BP2Q86UW6 1770 aaPredicted RBP17.46■□□□□ 0.39
AC005840.4-201ENST00000541242 SLU7O95391 586 aaKnown RBP17.46■□□□□ 0.39
AC005840.4-201ENST00000541242 POLA2Q14181 598 aa17.46■□□□□ 0.39
AC005840.4-201ENST00000541242 AMOTQ4VCS5 1084 aa17.46■□□□□ 0.39
AC005840.4-201ENST00000541242 CREB3L3Q68CJ9 461 aa17.46■□□□□ 0.39
AC005840.4-201ENST00000541242 CCAR2Q8N163 923 aaKnown RBP17.45■□□□□ 0.38
AC005840.4-201ENST00000541242 ERCC4Q92889 916 aaPredicted RBP17.45■□□□□ 0.38
AC005840.4-201ENST00000541242 FAM227BQ96M60 508 aa17.45■□□□□ 0.38
AC005840.4-201ENST00000541242 PXDNLA1KZ92 1463 aa17.45■□□□□ 0.38
AC005840.4-201ENST00000541242 CDC25BP30305 580 aa17.45■□□□□ 0.38
AC005840.4-201ENST00000541242 C1orf141Q5JVX7 400 aa17.45■□□□□ 0.38
AC005840.4-201ENST00000541242 NOL10Q9BSC4 688 aaKnown RBP17.45■□□□□ 0.38
AC005840.4-201ENST00000541242 TM6SF1Q9BZW5 370 aa17.45■□□□□ 0.38
AC005840.4-201ENST00000541242 OS9Q13438 667 aaPredicted RBP17.44■□□□□ 0.38
AC005840.4-201ENST00000541242 CRYBG1Q9Y4K1 1723 aa17.44■□□□□ 0.38
AC005840.4-201ENST00000541242 PRAMEF22A3QJZ6 481 aa17.44■□□□□ 0.38
AC005840.4-201ENST00000541242 PI4KAP2A4QPH2 592 aa17.44■□□□□ 0.38
AC005840.4-201ENST00000541242 JAK2O60674 1132 aa17.44■□□□□ 0.38
AC005840.4-201ENST00000541242 ZKSCAN1P17029 563 aaPredicted RBP17.44■□□□□ 0.38
AC005840.4-201ENST00000541242 PI4KAP1Q8N8J0 262 aa17.44■□□□□ 0.38
AC005840.4-201ENST00000541242 HOXB7P09629 217 aa17.43■□□□□ 0.38
AC005840.4-201ENST00000541242 RUFY2Q8WXA3 655 aa17.43■□□□□ 0.38
AC005840.4-201ENST00000541242 CALCOCO1Q9P1Z2 691 aa17.43■□□□□ 0.38
AC005840.4-201ENST00000541242 PDCP20941 246 aa17.43■□□□□ 0.38
AC005840.4-201ENST00000541242 FOSBP53539 338 aa17.43■□□□□ 0.38
AC005840.4-201ENST00000541242 HNRNPH2P55795 449 aaKnown RBP17.43■□□□□ 0.38
AC005840.4-201ENST00000541242 MRFAP1L1Q96HT8 127 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms