RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 ZNF644Q9H582 1327 aaPredicted RBP11.42□□□□□ -0.58
TRERF1-205ENST00000541110 GTF3C6Q969F1 213 aa11.42□□□□□ -0.58
TRERF1-205ENST00000541110 LRPPRCP42704 1394 aaKnown RBP11.42□□□□□ -0.58
TRERF1-205ENST00000541110 NOL3O60936 208 aaKnown RBP11.42□□□□□ -0.58
TRERF1-205ENST00000541110 HSF2BPO75031 334 aa11.42□□□□□ -0.58
TRERF1-205ENST00000541110 PPP2R1AP30153 589 aa11.42□□□□□ -0.58
TRERF1-205ENST00000541110 SELENOOQ9BVL4 669 aa11.42□□□□□ -0.58
TRERF1-205ENST00000541110 PICK1Q9NRD5 415 aa11.42□□□□□ -0.58
TRERF1-205ENST00000541110 TRIM47Q96LD4 638 aa11.42□□□□□ -0.58
TRERF1-205ENST00000541110 KIFC2Q96AC6 838 aa11.42□□□□□ -0.58
TRERF1-205ENST00000541110 C6orf50Q9HD87 102 aa11.42□□□□□ -0.58
TRERF1-205ENST00000541110 CWC25Q9NXE8 425 aaPredicted RBP11.42□□□□□ -0.58
TRERF1-205ENST00000541110 RASAL2Q9UJF2 1139 aa11.42□□□□□ -0.58
TRERF1-205ENST00000541110 BACH1O14867 736 aa11.42□□□□□ -0.58
TRERF1-205ENST00000541110 GLRX3O76003 335 aaKnown RBP11.42□□□□□ -0.58
TRERF1-205ENST00000541110 METAP2P50579 478 aaKnown RBP eCLIP11.42□□□□□ -0.58
TRERF1-205ENST00000541110 ZGPATQ8N5A5 531 aaKnown RBP11.42□□□□□ -0.58
TRERF1-205ENST00000541110 SCAPERQ9BY12 1400 aa11.42□□□□□ -0.58
TRERF1-205ENST00000541110 CDCA7LQ96GN5 454 aa11.41□□□□□ -0.58
TRERF1-205ENST00000541110 CGNQ9P2M7 1197 aaKnown RBP11.41□□□□□ -0.58
TRERF1-205ENST00000541110 DMRT2Q9Y5R5 561 aa11.41□□□□□ -0.58
TRERF1-205ENST00000541110 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.41□□□□□ -0.58
TRERF1-205ENST00000541110 KIF18AQ8NI77 898 aa11.41□□□□□ -0.58
TRERF1-205ENST00000541110 GOLGA1Q92805 767 aa11.41□□□□□ -0.58
TRERF1-205ENST00000541110 PPANQ9NQ55 473 aaKnown RBP11.41□□□□□ -0.58
TRERF1-205ENST00000541110 CLIP2Q9UDT6 1046 aa11.41□□□□□ -0.58
TRERF1-205ENST00000541110 GAPVD1Q14C86 1478 aa11.41□□□□□ -0.58
TRERF1-205ENST00000541110 NAIPQ13075 1403 aa11.41□□□□□ -0.58
TRERF1-205ENST00000541110 AMOTQ4VCS5 1084 aa11.41□□□□□ -0.58
TRERF1-205ENST00000541110 MSANTD4Q8NCY6 345 aa11.41□□□□□ -0.58
TRERF1-205ENST00000541110 GINS2Q9Y248 185 aa11.41□□□□□ -0.58
TRERF1-205ENST00000541110 DAPK3O43293 454 aa11.41□□□□□ -0.58
TRERF1-205ENST00000541110 FOXO3O43524 673 aa11.41□□□□□ -0.58
TRERF1-205ENST00000541110 HYPKQ9NX55 129 aa11.41□□□□□ -0.58
TRERF1-205ENST00000541110 AGTPBP1Q9UPW5 1226 aa11.41□□□□□ -0.58
TRERF1-205ENST00000541110 ATP5J2-PTCD1G3V325 749 aa11.41□□□□□ -0.58
TRERF1-205ENST00000541110 HARSP12081 509 aaKnown RBP11.41□□□□□ -0.58
TRERF1-205ENST00000541110 RPUSD2Q8IZ73 545 aaKnown RBP11.41□□□□□ -0.58
TRERF1-205ENST00000541110 TAF7Q15545 349 aaPredicted RBP11.4□□□□□ -0.58
TRERF1-205ENST00000541110 NFE2L2Q16236 605 aa11.4□□□□□ -0.58
TRERF1-205ENST00000541110 ZNF804AQ7Z570 1209 aa11.4□□□□□ -0.58
TRERF1-205ENST00000541110 CCDC114Q96M63 670 aa11.4□□□□□ -0.58
TRERF1-205ENST00000541110 NUDT16Q96DE0 195 aaKnown RBP11.4□□□□□ -0.58
TRERF1-205ENST00000541110 PPFIA3O75145 1194 aa11.4□□□□□ -0.58
TRERF1-205ENST00000541110 KRT5P13647 590 aa11.4□□□□□ -0.58
TRERF1-205ENST00000541110 FSIP1Q8NA03 581 aa11.4□□□□□ -0.58
TRERF1-205ENST00000541110 TBC1D31Q96DN5 1066 aa11.4□□□□□ -0.58
TRERF1-205ENST00000541110 SNRKQ9NRH2 765 aa11.4□□□□□ -0.58
TRERF1-205ENST00000541110 MAP3K2Q9Y2U5 619 aa11.4□□□□□ -0.58
TRERF1-205ENST00000541110 ERCC5P28715 1186 aaPredicted RBP11.4□□□□□ -0.58
TRERF1-205ENST00000541110 MVPQ14764 893 aaKnown RBP11.4□□□□□ -0.58
TRERF1-205ENST00000541110 ZFP91Q96JP5 570 aaPredicted RBP11.4□□□□□ -0.58
TRERF1-205ENST00000541110 ERBINQ96RT1 1412 aa11.4□□□□□ -0.58
TRERF1-205ENST00000541110 SLC8A3P57103 927 aa11.4□□□□□ -0.58
TRERF1-205ENST00000541110 EAPPQ56P03 285 aaPredicted RBP11.4□□□□□ -0.58
TRERF1-205ENST00000541110 TMOD4Q9NZQ9 345 aa11.4□□□□□ -0.58
TRERF1-205ENST00000541110 IQSEC3Q9UPP2 1182 aaPredicted RBP11.4□□□□□ -0.58
TRERF1-205ENST00000541110 TMC6Q7Z403 805 aa11.4□□□□□ -0.59
TRERF1-205ENST00000541110 KIAA1524Q8TCG1 905 aa11.4□□□□□ -0.59
TRERF1-205ENST00000541110 E7EVH7 732 aa11.39□□□□□ -0.59
TRERF1-205ENST00000541110 AFMP43652 599 aa11.39□□□□□ -0.59
TRERF1-205ENST00000541110 IARSP41252 1262 aaKnown RBP11.39□□□□□ -0.59
TRERF1-205ENST00000541110 JARID2Q92833 1246 aaPredicted RBP11.39□□□□□ -0.59
TRERF1-205ENST00000541110 SMC6Q96SB8 1091 aa11.39□□□□□ -0.59
TRERF1-205ENST00000541110 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRERF1-205ENST00000541110 TNNI2P48788 182 aa11.39□□□□□ -0.59
TRERF1-205ENST00000541110 PPP1R21Q6ZMI0 780 aa11.39□□□□□ -0.59
TRERF1-205ENST00000541110 KRT9P35527 623 aa11.39□□□□□ -0.59
TRERF1-205ENST00000541110 PPP2R5DQ14738 602 aa11.39□□□□□ -0.59
TRERF1-205ENST00000541110 PKD2L1Q9P0L9 805 aa11.39□□□□□ -0.59
TRERF1-205ENST00000541110 BRDTQ58F21 947 aaPredicted RBP11.39□□□□□ -0.59
TRERF1-205ENST00000541110 GPATCH11Q8N954 259 aa11.39□□□□□ -0.59
TRERF1-205ENST00000541110 PYM1Q9BRP8 204 aaKnown RBP11.39□□□□□ -0.59
TRERF1-205ENST00000541110 ATP2A1O14983 1001 aa11.39□□□□□ -0.59
TRERF1-205ENST00000541110 NAPAP54920 295 aa11.39□□□□□ -0.59
TRERF1-205ENST00000541110 GRPEL1Q9HAV7 217 aa11.39□□□□□ -0.59
TRERF1-205ENST00000541110 CLSTN2Q9H4D0 955 aa11.38□□□□□ -0.59
TRERF1-205ENST00000541110 KCNA4P22459 653 aa11.38□□□□□ -0.59
TRERF1-205ENST00000541110 CYP7A1P22680 504 aa11.38□□□□□ -0.59
TRERF1-205ENST00000541110 TRAF1Q13077 416 aa11.38□□□□□ -0.59
TRERF1-205ENST00000541110 PPP4R3BQ5MIZ7 849 aa11.38□□□□□ -0.59
TRERF1-205ENST00000541110 UAP1Q16222 522 aaPredicted RBP11.38□□□□□ -0.59
TRERF1-205ENST00000541110 IPO4Q8TEX9 1081 aaKnown RBP11.38□□□□□ -0.59
TRERF1-205ENST00000541110 SPAG5Q96R06 1193 aa11.38□□□□□ -0.59
TRERF1-205ENST00000541110 CSPG5O95196 566 aa11.38□□□□□ -0.59
TRERF1-205ENST00000541110 MX1P20591 662 aa11.38□□□□□ -0.59
TRERF1-205ENST00000541110 SMIM23A6NLE4 172 aa11.38□□□□□ -0.59
TRERF1-205ENST00000541110 XRCC6P12956 609 aaKnown RBP eCLIP11.38□□□□□ -0.59
TRERF1-205ENST00000541110 WTAPQ15007 396 aa11.38□□□□□ -0.59
TRERF1-205ENST00000541110 RAB3GAP1Q15042 981 aa11.38□□□□□ -0.59
TRERF1-205ENST00000541110 USP16Q9Y5T5 823 aa11.38□□□□□ -0.59
TRERF1-205ENST00000541110 FAM200AQ8TCP9 573 aa11.38□□□□□ -0.59
TRERF1-205ENST00000541110 ANO3Q9BYT9 981 aa11.38□□□□□ -0.59
TRERF1-205ENST00000541110 PDIA4P13667 645 aaKnown RBP11.37□□□□□ -0.59
TRERF1-205ENST00000541110 KRT28Q7Z3Y7 464 aa11.37□□□□□ -0.59
TRERF1-205ENST00000541110 PDCL2Q8N4E4 241 aa11.37□□□□□ -0.59
TRERF1-205ENST00000541110 SMARCC1Q92922 1105 aaPredicted RBP11.37□□□□□ -0.59
TRERF1-205ENST00000541110 AFG3L2Q9Y4W6 797 aa11.37□□□□□ -0.59
TRERF1-205ENST00000541110 NOP56O00567 594 aaKnown RBP11.37□□□□□ -0.59
TRERF1-205ENST00000541110 RAPGEF3O95398 923 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms