RNA–Protein interactions for RNA: ENST00000540828.6

PTMS-205, Transcript of parathymosin, humanhuman

TSL 1 (best)

Gene PTMS, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-205ENST00000540828 TMC4Q7Z404 712 aa27.08■■□□□ 1.93
PTMS-205ENST00000540828 JDP2Q8WYK2 163 aa27.08■■□□□ 1.93
PTMS-205ENST00000540828 ZNF521Q96K83 1311 aa27.08■■□□□ 1.93
PTMS-205ENST00000540828 IGKV5-2P06315 115 aa27.07■■□□□ 1.92
PTMS-205ENST00000540828 RTFDC1Q9BY42 306 aaPredicted RBP27.07■■□□□ 1.92
PTMS-205ENST00000540828 VPS33BQ9H267 617 aa27.07■■□□□ 1.92
PTMS-205ENST00000540828 ZNF541Q9H0D2 1346 aa27.07■■□□□ 1.92
PTMS-205ENST00000540828 SMC1BQ8NDV3 1235 aa27.06■■□□□ 1.92
PTMS-205ENST00000540828 L3MBTL3Q96JM7 780 aaPredicted RBP27.06■■□□□ 1.92
PTMS-205ENST00000540828 NEXNQ0ZGT2 675 aa27.05■■□□□ 1.92
PTMS-205ENST00000540828 FLIIQ13045 1269 aa27.05■■□□□ 1.92
PTMS-205ENST00000540828 LARGE2Q8N3Y3 721 aa27.05■■□□□ 1.92
PTMS-205ENST00000540828 MPNDQ8N594 471 aa27.05■■□□□ 1.92
PTMS-205ENST00000540828 JARID2Q92833 1246 aaPredicted RBP27.05■■□□□ 1.92
PTMS-205ENST00000540828 APLP1P51693 650 aa27.04■■□□□ 1.92
PTMS-205ENST00000540828 SUPT20HQ8NEM7 779 aa27.04■■□□□ 1.92
PTMS-205ENST00000540828 CELF1Q92879 486 aaKnown RBP27.04■■□□□ 1.92
PTMS-205ENST00000540828 TAF1P21675 1872 aa27.03■■□□□ 1.92
PTMS-205ENST00000540828 DPP8Q6V1X1 898 aaPredicted RBP27.03■■□□□ 1.92
PTMS-205ENST00000540828 COL4A5P29400 1685 aa27.02■■□□□ 1.92
PTMS-205ENST00000540828 PDE8AO60658 829 aa27.02■■□□□ 1.92
PTMS-205ENST00000540828 CACNA1FO60840 1977 aa27.02■■□□□ 1.92
PTMS-205ENST00000540828 CDHR2Q9BYE9 1310 aa27.01■■□□□ 1.91
PTMS-205ENST00000540828 IQCA1LA6NCM1 817 aa27.01■■□□□ 1.91
PTMS-205ENST00000540828 NEURL1BA8MQ27 555 aa27.01■■□□□ 1.91
PTMS-205ENST00000540828 CCER2I3L3R5 266 aa27.01■■□□□ 1.91
PTMS-205ENST00000540828 PPIP5K2O43314 1243 aa27.01■■□□□ 1.91
PTMS-205ENST00000540828 EIF6P56537 245 aaKnown RBP27.01■■□□□ 1.91
PTMS-205ENST00000540828 RPS8P62241 208 aaKnown RBP27.01■■□□□ 1.91
PTMS-205ENST00000540828 GPC2Q8N158 579 aa27.01■■□□□ 1.91
PTMS-205ENST00000540828 FKBP5Q13451 457 aaPredicted RBP27■■□□□ 1.91
PTMS-205ENST00000540828 AOC3Q16853 763 aa27■■□□□ 1.91
PTMS-205ENST00000540828 CWF19L2Q2TBE0 894 aaKnown RBP27■■□□□ 1.91
PTMS-205ENST00000540828 NIM1KQ8IY84 436 aa26.99■■□□□ 1.91
PTMS-205ENST00000540828 DNAAF4Q8WXU2 420 aa26.99■■□□□ 1.91
PTMS-205ENST00000540828 TAF1DQ9H5J8 278 aaPredicted RBP26.99■■□□□ 1.91
PTMS-205ENST00000540828 CEP350Q5VT06 3117 aa26.99■■□□□ 1.91
PTMS-205ENST00000540828 H7C1W4 665 aa26.98■■□□□ 1.91
PTMS-205ENST00000540828 CCDC152Q4G0S7 254 aa26.98■■□□□ 1.91
PTMS-205ENST00000540828 SEC31BQ9NQW1 1179 aa26.98■■□□□ 1.91
PTMS-205ENST00000540828 KIAA2012Q0VF49 1180 aa26.97■■□□□ 1.91
PTMS-205ENST00000540828 SCN4AP35499 1836 aa26.96■■□□□ 1.91
PTMS-205ENST00000540828 HACL1Q9UJ83 578 aa26.96■■□□□ 1.91
PTMS-205ENST00000540828 ZNRF3Q9ULT6 936 aa26.96■■□□□ 1.91
PTMS-205ENST00000540828 COL4A1P02462 1669 aa26.95■■□□□ 1.91
PTMS-205ENST00000540828 GCKRQ14397 625 aa26.95■■□□□ 1.9
PTMS-205ENST00000540828 LINS1Q8NG48 757 aa26.95■■□□□ 1.9
PTMS-205ENST00000540828 NSFL1CQ9UNZ2 370 aaKnown RBP26.95■■□□□ 1.9
PTMS-205ENST00000540828 GJA3Q9Y6H8 435 aa26.95■■□□□ 1.9
PTMS-205ENST00000540828 POTEIP0CG38 1075 aa26.94■■□□□ 1.9
PTMS-205ENST00000540828 POTEJP0CG39 1038 aa26.94■■□□□ 1.9
PTMS-205ENST00000540828 GPSM2P81274 684 aa26.94■■□□□ 1.9
PTMS-205ENST00000540828 CHADLQ6NUI6 762 aa26.94■■□□□ 1.9
PTMS-205ENST00000540828 LRRC37AA6NMS7 1700 aa26.93■■□□□ 1.9
PTMS-205ENST00000540828 E9PSI1 815 aa26.93■■□□□ 1.9
PTMS-205ENST00000540828 CTSWP56202 376 aa26.93■■□□□ 1.9
PTMS-205ENST00000540828 DNAJC5GQ8N7S2 189 aa26.93■■□□□ 1.9
PTMS-205ENST00000540828 TTLL11Q8NHH1 800 aa26.93■■□□□ 1.9
PTMS-205ENST00000540828 CCDC85AQ96PX6 553 aaPredicted RBP26.93■■□□□ 1.9
PTMS-205ENST00000540828 EPHX2P34913 555 aa26.92■■□□□ 1.9
PTMS-205ENST00000540828 SLFN5Q08AF3 891 aa26.92■■□□□ 1.9
PTMS-205ENST00000540828 UBE3BQ7Z3V4 1068 aa26.92■■□□□ 1.9
PTMS-205ENST00000540828 POLLQ9UGP5 575 aa26.92■■□□□ 1.9
PTMS-205ENST00000540828 CASP7P55210 303 aa26.91■■□□□ 1.9
PTMS-205ENST00000540828 CXCL9Q07325 125 aa26.91■■□□□ 1.9
PTMS-205ENST00000540828 LDHDQ86WU2 507 aa26.91■■□□□ 1.9
PTMS-205ENST00000540828 PLA2G12BQ9BX93 195 aa26.91■■□□□ 1.9
PTMS-205ENST00000540828 DUOX1Q9NRD9 1551 aa26.91■■□□□ 1.9
PTMS-205ENST00000540828 F6X3S4 739 aa26.9■■□□□ 1.9
PTMS-205ENST00000540828 WASHC4Q2M389 1173 aa26.9■■□□□ 1.9
PTMS-205ENST00000540828 PODXL2Q9NZ53 605 aa26.9■■□□□ 1.9
PTMS-205ENST00000540828 C6orf229H3BNL8 230 aa26.89■■□□□ 1.9
PTMS-205ENST00000540828 BEND3Q5T5X7 828 aa26.89■■□□□ 1.9
PTMS-205ENST00000540828 PNMA8AQ86V59 439 aaPredicted RBP26.89■■□□□ 1.9
PTMS-205ENST00000540828 ANKRD18AQ8IVF6 992 aa26.89■■□□□ 1.9
PTMS-205ENST00000540828 TBC1D16Q8TBP0 767 aa26.89■■□□□ 1.9
PTMS-205ENST00000540828 SCNN1DP51172 638 aa26.88■■□□□ 1.89
PTMS-205ENST00000540828 HTRA3P83110 453 aa26.88■■□□□ 1.89
PTMS-205ENST00000540828 RTL9Q8NET4 1388 aa26.87■■□□□ 1.89
PTMS-205ENST00000540828 LMOD1P29536 600 aaPredicted RBP26.87■■□□□ 1.89
PTMS-205ENST00000540828 EAPPQ56P03 285 aaPredicted RBP26.87■■□□□ 1.89
PTMS-205ENST00000540828 CIAPIN1Q6FI81 312 aa26.87■■□□□ 1.89
PTMS-205ENST00000540828 CDC5LQ99459 802 aaKnown RBP26.87■■□□□ 1.89
PTMS-205ENST00000540828 EYA3Q99504 573 aa26.87■■□□□ 1.89
PTMS-205ENST00000540828 GREM2Q9H772 168 aa26.87■■□□□ 1.89
PTMS-205ENST00000540828 EPS15P42566 896 aa26.86■■□□□ 1.89
PTMS-205ENST00000540828 YDJCA8MPS7 323 aa26.85■■□□□ 1.89
PTMS-205ENST00000540828 RIMBP2O15034 1052 aa26.85■■□□□ 1.89
PTMS-205ENST00000540828 RAD17O75943 681 aa26.85■■□□□ 1.89
PTMS-205ENST00000540828 CSF1RP07333 972 aa26.85■■□□□ 1.89
PTMS-205ENST00000540828 TNIP1Q15025 636 aa26.85■■□□□ 1.89
PTMS-205ENST00000540828 CDCA7LQ96GN5 454 aa26.85■■□□□ 1.89
PTMS-205ENST00000540828 ANKIB1Q9P2G1 1089 aa26.85■■□□□ 1.89
PTMS-205ENST00000540828 CLEC11AQ9Y240 323 aa26.85■■□□□ 1.89
PTMS-205ENST00000540828 TRMT2AQ8IZ69 625 aaKnown RBP26.84■■□□□ 1.89
PTMS-205ENST00000540828 MRPL50Q8N5N7 158 aaKnown RBP26.84■■□□□ 1.89
PTMS-205ENST00000540828 BSDC1Q9NW68 430 aaPredicted RBP26.84■■□□□ 1.89
PTMS-205ENST00000540828 LTBP1Q14766 1721 aa26.84■■□□□ 1.89
PTMS-205ENST00000540828 ZC3H12CQ9C0D7 883 aaKnown RBP26.83■■□□□ 1.89
PTMS-205ENST00000540828 GPRC5DQ9NZD1 345 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms