RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 ZNF652Q9Y2D9 606 aa30.09■■■□□ 2.41
TTC3-225ENST00000540756 NTSR2O95665 410 aa30.08■■■□□ 2.41
TTC3-225ENST00000540756 NARFQ9UHQ1 456 aa30.08■■■□□ 2.41
TTC3-225ENST00000540756 SH3TC1Q8TE82 1336 aa30.08■■■□□ 2.41
TTC3-225ENST00000540756 SCN7AQ01118 1682 aa30.08■■■□□ 2.41
TTC3-225ENST00000540756 PARP10Q53GL7 1025 aa30.08■■■□□ 2.41
TTC3-225ENST00000540756 TBC1D9BQ66K14 1250 aa30.08■■■□□ 2.41
TTC3-225ENST00000540756 IPO9Q96P70 1041 aaKnown RBP30.08■■■□□ 2.41
TTC3-225ENST00000540756 PDE8AO60658 829 aa30.07■■■□□ 2.4
TTC3-225ENST00000540756 TNNI3KQ59H18 835 aa30.07■■■□□ 2.4
TTC3-225ENST00000540756 FPGT-TNNI3KV9GXZ4 949 aa30.07■■■□□ 2.4
TTC3-225ENST00000540756 EYA2O00167 538 aa30.06■■■□□ 2.4
TTC3-225ENST00000540756 PROM2Q8N271 834 aa30.06■■■□□ 2.4
TTC3-225ENST00000540756 ECHDC1Q9NTX5 307 aa30.06■■■□□ 2.4
TTC3-225ENST00000540756 ITGA6P23229 1130 aa30.06■■■□□ 2.4
TTC3-225ENST00000540756 IFIT5Q13325 482 aaKnown RBP30.06■■■□□ 2.4
TTC3-225ENST00000540756 TTC41PQ6P2S7 1318 aa30.06■■■□□ 2.4
TTC3-225ENST00000540756 AK7Q96M32 723 aa30.05■■■□□ 2.4
TTC3-225ENST00000540756 DDX60Q8IY21 1712 aaKnown RBP30.05■■■□□ 2.4
TTC3-225ENST00000540756 C22orf23Q9BZE7 217 aa30.05■■■□□ 2.4
TTC3-225ENST00000540756 C4AP0C0L4 1744 aa30.04■■■□□ 2.4
TTC3-225ENST00000540756 DBNLQ9UJU6 430 aaKnown RBP30.04■■■□□ 2.4
TTC3-225ENST00000540756 ZPR1O75312 459 aa30.03■■■□□ 2.4
TTC3-225ENST00000540756 AK9Q5TCS8 1911 aa30.03■■■□□ 2.4
TTC3-225ENST00000540756 IL15P40933 162 aaPredicted RBP30.03■■■□□ 2.4
TTC3-225ENST00000540756 GLRX3O76003 335 aaKnown RBP30.01■■■□□ 2.4
TTC3-225ENST00000540756 CIAO1O76071 339 aa30.01■■■□□ 2.4
TTC3-225ENST00000540756 TAF7LQ5H9L4 462 aa30.01■■■□□ 2.4
TTC3-225ENST00000540756 SLC27A3Q5K4L6 730 aa30.01■■■□□ 2.39
TTC3-225ENST00000540756 TRAPPC3LQ5T215 181 aa30.01■■■□□ 2.39
TTC3-225ENST00000540756 DBNDD2Q9BQY9 259 aa30.01■■■□□ 2.39
TTC3-225ENST00000540756 TXNRD1Q16881 649 aa30■■■□□ 2.39
TTC3-225ENST00000540756 ERFEQ4G0M1 354 aa30■■■□□ 2.39
TTC3-225ENST00000540756 GPATCH3Q96I76 525 aa30■■■□□ 2.39
TTC3-225ENST00000540756 UBR3Q6ZT12 1888 aa30■■■□□ 2.39
TTC3-225ENST00000540756 TIMM10P62072 90 aa30■■■□□ 2.39
TTC3-225ENST00000540756 ANKRD18BA2A2Z9 1011 aa29.99■■■□□ 2.39
TTC3-225ENST00000540756 ERC2O15083 957 aa29.99■■■□□ 2.39
TTC3-225ENST00000540756 RFC4P35249 363 aa29.99■■■□□ 2.39
TTC3-225ENST00000540756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.98■■■□□ 2.39
TTC3-225ENST00000540756 CHMLP26374 656 aa29.98■■■□□ 2.39
TTC3-225ENST00000540756 BOLA2Q9H3K6 86 aa29.98■■■□□ 2.39
TTC3-225ENST00000540756 SEC31BQ9NQW1 1179 aa29.98■■■□□ 2.39
TTC3-225ENST00000540756 APBA3O96018 575 aa29.97■■■□□ 2.39
TTC3-225ENST00000540756 C3orf67Q6ZVT6 689 aa29.97■■■□□ 2.39
TTC3-225ENST00000540756 CASC1Q6TDU7 716 aa29.96■■■□□ 2.39
TTC3-225ENST00000540756 LDHAL6AQ6ZMR3 332 aa29.96■■■□□ 2.39
TTC3-225ENST00000540756 NEUROD6Q96NK8 337 aa29.96■■■□□ 2.39
TTC3-225ENST00000540756 SETDB2Q96T68 719 aa29.96■■■□□ 2.39
TTC3-225ENST00000540756 RIPOR2Q9Y4F9 1068 aa29.96■■■□□ 2.39
TTC3-225ENST00000540756 CCDC24Q8N4L8 307 aa29.95■■■□□ 2.39
TTC3-225ENST00000540756 IL25Q9H293 177 aa29.95■■■□□ 2.39
TTC3-225ENST00000540756 LAMB2P55268 1798 aa29.95■■■□□ 2.38
TTC3-225ENST00000540756 RGL2O15211 777 aa29.95■■■□□ 2.38
TTC3-225ENST00000540756 CEP126Q9P2H0 1117 aa29.95■■■□□ 2.38
TTC3-225ENST00000540756 NDUFB9Q9Y6M9 179 aa29.95■■■□□ 2.38
TTC3-225ENST00000540756 SLC4A3P48751 1232 aa29.94■■■□□ 2.38
TTC3-225ENST00000540756 CNTROBQ8N137 903 aa29.94■■■□□ 2.38
TTC3-225ENST00000540756 RIC1Q4ADV7 1423 aa29.94■■■□□ 2.38
TTC3-225ENST00000540756 COL4A1P02462 1669 aa29.94■■■□□ 2.38
TTC3-225ENST00000540756 ZNF609O15014 1411 aa29.93■■■□□ 2.38
TTC3-225ENST00000540756 ABCC12Q96J65 1359 aa29.93■■■□□ 2.38
TTC3-225ENST00000540756 A0A1B0GUL7 405 aa29.93■■■□□ 2.38
TTC3-225ENST00000540756 RBM25P49756 843 aaKnown RBP29.93■■■□□ 2.38
TTC3-225ENST00000540756 GPR108Q9NPR9 543 aa29.93■■■□□ 2.38
TTC3-225ENST00000540756 FBXO3Q9UK99 471 aa29.93■■■□□ 2.38
TTC3-225ENST00000540756 CASZ1Q86V15 1759 aa29.92■■■□□ 2.38
TTC3-225ENST00000540756 EDC3Q96F86 508 aaKnown RBP29.92■■■□□ 2.38
TTC3-225ENST00000540756 ESYT1Q9BSJ8 1104 aa29.92■■■□□ 2.38
TTC3-225ENST00000540756 CNNM1Q9NRU3 951 aa29.92■■■□□ 2.38
TTC3-225ENST00000540756 COL24A1Q17RW2 1714 aa29.92■■■□□ 2.38
TTC3-225ENST00000540756 USP26Q9BXU7 913 aa29.91■■■□□ 2.38
TTC3-225ENST00000540756 TAF1P21675 1872 aa29.91■■■□□ 2.38
TTC3-225ENST00000540756 PLSCR1O15162 318 aa29.9■■■□□ 2.38
TTC3-225ENST00000540756 GTF2E1P29083 439 aaPredicted RBP29.9■■■□□ 2.38
TTC3-225ENST00000540756 NBPF5PQ86XG9 351 aaPredicted RBP29.9■■■□□ 2.38
TTC3-225ENST00000540756 ATP5JP18859 108 aa29.89■■■□□ 2.38
TTC3-225ENST00000540756 ADORA1P30542 326 aa29.89■■■□□ 2.38
TTC3-225ENST00000540756 CCDC152Q4G0S7 254 aa29.89■■■□□ 2.38
TTC3-225ENST00000540756 METTL24Q5JXM2 366 aa29.89■■■□□ 2.38
TTC3-225ENST00000540756 DDRGK1Q96HY6 314 aa29.89■■■□□ 2.38
TTC3-225ENST00000540756 SPEF2Q9C093 1822 aa29.89■■■□□ 2.38
TTC3-225ENST00000540756 ADRA2BP18089 450 aa29.89■■■□□ 2.38
TTC3-225ENST00000540756 NFIXQ14938 502 aa29.88■■■□□ 2.37
TTC3-225ENST00000540756 ZNF827Q17R98 1081 aa29.88■■■□□ 2.37
TTC3-225ENST00000540756 EVI5LQ96CN4 794 aa29.88■■■□□ 2.37
TTC3-225ENST00000540756 KIF2CQ99661 725 aa29.88■■■□□ 2.37
TTC3-225ENST00000540756 VGLL2Q8N8G2 317 aa29.87■■■□□ 2.37
TTC3-225ENST00000540756 HELBQ8NG08 1087 aaPredicted RBP29.87■■■□□ 2.37
TTC3-225ENST00000540756 LRP5O75197 1615 aa29.87■■■□□ 2.37
TTC3-225ENST00000540756 TNS1Q9HBL0 1735 aaKnown RBP29.86■■■□□ 2.37
TTC3-225ENST00000540756 GYS1P13807 737 aa29.86■■■□□ 2.37
TTC3-225ENST00000540756 SSFA2P28290 1259 aa29.86■■■□□ 2.37
TTC3-225ENST00000540756 SLC10A5Q5PT55 438 aa29.86■■■□□ 2.37
TTC3-225ENST00000540756 HSP90B1P14625 803 aaKnown RBP29.85■■■□□ 2.37
TTC3-225ENST00000540756 XAGE2Q96GT9 111 aa29.85■■■□□ 2.37
TTC3-225ENST00000540756 NYXQ9GZU5 481 aa29.85■■■□□ 2.37
TTC3-225ENST00000540756 CWC27Q6UX04 472 aaKnown RBP29.84■■■□□ 2.37
TTC3-225ENST00000540756 DNAJC2Q99543 621 aaKnown RBP29.84■■■□□ 2.37
TTC3-225ENST00000540756 REC8O95072 547 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms