RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 ZNF594Q96JF6 807 aaPredicted RBP11.69□□□□□ -0.54
PAAF1-209ENST00000540659 COPRSQ9NQ92 184 aa11.69□□□□□ -0.54
PAAF1-209ENST00000540659 TRMT112Q9UI30 125 aaKnown RBP11.69□□□□□ -0.54
PAAF1-209ENST00000540659 SPEF2Q9C093 1822 aa11.69□□□□□ -0.54
PAAF1-209ENST00000540659 DDX60Q8IY21 1712 aaKnown RBP11.69□□□□□ -0.54
PAAF1-209ENST00000540659 UBN2Q6ZU65 1347 aa11.68□□□□□ -0.54
PAAF1-209ENST00000540659 TFCP2Q12800 502 aa11.68□□□□□ -0.54
PAAF1-209ENST00000540659 TRIM28Q13263 835 aaKnown RBP11.68□□□□□ -0.54
PAAF1-209ENST00000540659 SMIM5Q71RC9 77 aa11.68□□□□□ -0.54
PAAF1-209ENST00000540659 PI4K2BQ8TCG2 481 aa11.68□□□□□ -0.54
PAAF1-209ENST00000540659 GPATCH3Q96I76 525 aa11.68□□□□□ -0.54
PAAF1-209ENST00000540659 PDGFDQ9GZP0 370 aaPredicted RBP11.68□□□□□ -0.54
PAAF1-209ENST00000540659 TLR7Q9NYK1 1049 aaKnown RBP11.68□□□□□ -0.54
PAAF1-209ENST00000540659 DAXXQ9UER7 740 aaPredicted RBP11.68□□□□□ -0.54
PAAF1-209ENST00000540659 LAMB2P55268 1798 aa11.68□□□□□ -0.54
PAAF1-209ENST00000540659 TTC41PQ6P2S7 1318 aa11.67□□□□□ -0.54
PAAF1-209ENST00000540659 CDHR2Q9BYE9 1310 aa11.67□□□□□ -0.54
PAAF1-209ENST00000540659 RGL2O15211 777 aa11.67□□□□□ -0.54
PAAF1-209ENST00000540659 EIF5BO60841 1220 aaKnown RBP11.67□□□□□ -0.54
PAAF1-209ENST00000540659 CAMTA2O94983 1202 aa11.67□□□□□ -0.54
PAAF1-209ENST00000540659 TAF7LQ5H9L4 462 aa11.67□□□□□ -0.54
PAAF1-209ENST00000540659 ZNF34Q8IZ26 560 aa11.67□□□□□ -0.54
PAAF1-209ENST00000540659 EAF2Q96CJ1 260 aaPredicted RBP11.67□□□□□ -0.54
PAAF1-209ENST00000540659 PNPLA7Q6ZV29 1317 aa11.66□□□□□ -0.54
PAAF1-209ENST00000540659 CNTNAP4Q9C0A0 1308 aa11.66□□□□□ -0.54
PAAF1-209ENST00000540659 IRS4O14654 1257 aaPredicted RBP11.66□□□□□ -0.54
PAAF1-209ENST00000540659 ERC2O15083 957 aa11.66□□□□□ -0.54
PAAF1-209ENST00000540659 CCDC57Q2TAC2 916 aa11.66□□□□□ -0.54
PAAF1-209ENST00000540659 LRRC24Q50LG9 513 aa11.66□□□□□ -0.54
PAAF1-209ENST00000540659 SUSD4Q5VX71 490 aa11.66□□□□□ -0.54
PAAF1-209ENST00000540659 CNTROBQ8N137 903 aa11.66□□□□□ -0.54
PAAF1-209ENST00000540659 ECHDC1Q9NTX5 307 aa11.66□□□□□ -0.54
PAAF1-209ENST00000540659 C4AP0C0L4 1744 aa11.66□□□□□ -0.54
PAAF1-209ENST00000540659 COL24A1Q17RW2 1714 aa11.66□□□□□ -0.54
PAAF1-209ENST00000540659 USP42Q9H9J4 1324 aaKnown RBP11.65□□□□□ -0.54
PAAF1-209ENST00000540659 TNNI3KQ59H18 835 aa11.65□□□□□ -0.54
PAAF1-209ENST00000540659 PLA2G12BQ9BX93 195 aa11.65□□□□□ -0.54
PAAF1-209ENST00000540659 PUS3Q9BZE2 481 aaKnown RBP11.65□□□□□ -0.54
PAAF1-209ENST00000540659 NIP7Q9Y221 180 aaKnown RBP eCLIP11.65□□□□□ -0.54
PAAF1-209ENST00000540659 FPGT-TNNI3KV9GXZ4 949 aa11.65□□□□□ -0.54
PAAF1-209ENST00000540659 GNPATO15228 680 aa11.64□□□□□ -0.55
PAAF1-209ENST00000540659 PDE8AO60658 829 aa11.64□□□□□ -0.55
PAAF1-209ENST00000540659 GLRX3O76003 335 aaKnown RBP11.64□□□□□ -0.55
PAAF1-209ENST00000540659 PHF14O94880 888 aa11.64□□□□□ -0.55
PAAF1-209ENST00000540659 CTSWP56202 376 aa11.64□□□□□ -0.55
PAAF1-209ENST00000540659 IFIT5Q13325 482 aaKnown RBP11.64□□□□□ -0.55
PAAF1-209ENST00000540659 BICDL1Q6ZP65 573 aa11.64□□□□□ -0.55
PAAF1-209ENST00000540659 ATG9AQ7Z3C6 839 aa11.64□□□□□ -0.55
PAAF1-209ENST00000540659 NEUROD6Q96NK8 337 aa11.64□□□□□ -0.55
PAAF1-209ENST00000540659 UTP14AQ9BVJ6 771 aaKnown RBP11.64□□□□□ -0.55
PAAF1-209ENST00000540659 TFCP2L1Q9NZI6 479 aa11.64□□□□□ -0.55
PAAF1-209ENST00000540659 ZNF652Q9Y2D9 606 aa11.64□□□□□ -0.55
PAAF1-209ENST00000540659 ANKRD18BA2A2Z9 1011 aa11.63□□□□□ -0.55
PAAF1-209ENST00000540659 EYA2O00167 538 aa11.63□□□□□ -0.55
PAAF1-209ENST00000540659 ZBTB7AO95365 584 aa11.63□□□□□ -0.55
PAAF1-209ENST00000540659 CSF1RP07333 972 aa11.63□□□□□ -0.55
PAAF1-209ENST00000540659 HCLS1P14317 486 aaPredicted RBP11.63□□□□□ -0.55
PAAF1-209ENST00000540659 ITGA6P23229 1130 aa11.63□□□□□ -0.55
PAAF1-209ENST00000540659 CHMLP26374 656 aa11.63□□□□□ -0.55
PAAF1-209ENST00000540659 IL15P40933 162 aaPredicted RBP11.63□□□□□ -0.55
PAAF1-209ENST00000540659 RBM25P49756 843 aaKnown RBP11.63□□□□□ -0.55
PAAF1-209ENST00000540659 BECN1Q14457 450 aa11.63□□□□□ -0.55
PAAF1-209ENST00000540659 RC3H1Q5TC82 1133 aaKnown RBP11.63□□□□□ -0.55
PAAF1-209ENST00000540659 USPL1Q5W0Q7 1092 aa11.63□□□□□ -0.55
PAAF1-209ENST00000540659 AMIGO3Q86WK7 504 aa11.63□□□□□ -0.55
PAAF1-209ENST00000540659 TTLL11Q8NHH1 800 aa11.63□□□□□ -0.55
PAAF1-209ENST00000540659 AK7Q96M32 723 aa11.63□□□□□ -0.55
PAAF1-209ENST00000540659 ESYT1Q9BSJ8 1104 aa11.63□□□□□ -0.55
PAAF1-209ENST00000540659 BOLA2Q9H3K6 86 aa11.63□□□□□ -0.55
PAAF1-209ENST00000540659 GREM2Q9H772 168 aa11.63□□□□□ -0.55
PAAF1-209ENST00000540659 SRP68Q9UHB9 627 aaKnown RBP11.63□□□□□ -0.55
PAAF1-209ENST00000540659 SH3TC1Q8TE82 1336 aa11.62□□□□□ -0.55
PAAF1-209ENST00000540659 ZNF609O15014 1411 aa11.62□□□□□ -0.55
PAAF1-209ENST00000540659 RPS6KA4O75676 772 aa11.62□□□□□ -0.55
PAAF1-209ENST00000540659 PARP10Q53GL7 1025 aa11.62□□□□□ -0.55
PAAF1-209ENST00000540659 DBNDD2Q9BQY9 259 aa11.62□□□□□ -0.55
PAAF1-209ENST00000540659 DBNLQ9UJU6 430 aaKnown RBP11.62□□□□□ -0.55
PAAF1-209ENST00000540659 RTCBQ9Y3I0 505 aaKnown RBP11.62□□□□□ -0.55
PAAF1-209ENST00000540659 ZPR1O75312 459 aa11.61□□□□□ -0.55
PAAF1-209ENST00000540659 CIAO1O76071 339 aa11.61□□□□□ -0.55
PAAF1-209ENST00000540659 REC8O95072 547 aa11.61□□□□□ -0.55
PAAF1-209ENST00000540659 NTSR2O95665 410 aa11.61□□□□□ -0.55
PAAF1-209ENST00000540659 TIMM10P62072 90 aa11.61□□□□□ -0.55
PAAF1-209ENST00000540659 TBC1D9BQ66K14 1250 aa11.61□□□□□ -0.55
PAAF1-209ENST00000540659 USP26Q9BXU7 913 aa11.61□□□□□ -0.55
PAAF1-209ENST00000540659 SPON1Q9HCB6 807 aa11.61□□□□□ -0.55
PAAF1-209ENST00000540659 CWC27Q6UX04 472 aaKnown RBP11.6□□□□□ -0.55
PAAF1-209ENST00000540659 COL23A1Q86Y22 540 aaPredicted RBP11.6□□□□□ -0.55
PAAF1-209ENST00000540659 EVI5LQ96CN4 794 aa11.6□□□□□ -0.55
PAAF1-209ENST00000540659 DNAJC2Q99543 621 aaKnown RBP11.6□□□□□ -0.55
PAAF1-209ENST00000540659 MTFR1LQ9H019 292 aa11.6□□□□□ -0.55
PAAF1-209ENST00000540659 ANO2Q9NQ90 1003 aa11.6□□□□□ -0.55
PAAF1-209ENST00000540659 CNNM1Q9NRU3 951 aa11.6□□□□□ -0.55
PAAF1-209ENST00000540659 CEP126Q9P2H0 1117 aa11.6□□□□□ -0.55
PAAF1-209ENST00000540659 NARFQ9UHQ1 456 aa11.6□□□□□ -0.55
PAAF1-209ENST00000540659 NDUFB9Q9Y6M9 179 aa11.6□□□□□ -0.55
PAAF1-209ENST00000540659 RIC1Q4ADV7 1423 aa11.6□□□□□ -0.55
PAAF1-209ENST00000540659 A0A1B0GUL7 405 aa11.59□□□□□ -0.55
PAAF1-209ENST00000540659 SSFA2P28290 1259 aa11.59□□□□□ -0.55
PAAF1-209ENST00000540659 PTGER2P43116 358 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms