RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 NRXN2Q9P2S2 1712 aa15.58■□□□□ 0.08
LMO3-223ENST00000540590 IRS4O14654 1257 aaPredicted RBP15.58■□□□□ 0.08
LMO3-223ENST00000540590 HMMRO75330 724 aa15.58■□□□□ 0.08
LMO3-223ENST00000540590 TM4SF1P30408 202 aa15.58■□□□□ 0.08
LMO3-223ENST00000540590 NUTM1Q86Y26 1132 aa15.58■□□□□ 0.08
LMO3-223ENST00000540590 SSH3Q8TE77 659 aa15.58■□□□□ 0.08
LMO3-223ENST00000540590 SRGAP3O43295 1099 aa15.57■□□□□ 0.08
LMO3-223ENST00000540590 NBPF5PQ86XG9 351 aaPredicted RBP15.57■□□□□ 0.08
LMO3-223ENST00000540590 NLGN1Q8N2Q7 840 aa15.57■□□□□ 0.08
LMO3-223ENST00000540590 NYXQ9GZU5 481 aa15.57■□□□□ 0.08
LMO3-223ENST00000540590 PDE8AO60658 829 aa15.56■□□□□ 0.08
LMO3-223ENST00000540590 HCLS1P14317 486 aaPredicted RBP15.56■□□□□ 0.08
LMO3-223ENST00000540590 DDR1Q08345 913 aa15.56■□□□□ 0.08
LMO3-223ENST00000540590 ERFEQ4G0M1 354 aa15.56■□□□□ 0.08
LMO3-223ENST00000540590 LMBR1LQ6UX01 489 aa15.56■□□□□ 0.08
LMO3-223ENST00000540590 SMC5Q8IY18 1101 aa15.56■□□□□ 0.08
LMO3-223ENST00000540590 SLC16A10Q8TF71 515 aa15.56■□□□□ 0.08
LMO3-223ENST00000540590 ABCC12Q96J65 1359 aa15.56■□□□□ 0.08
LMO3-223ENST00000540590 TNRC6CQ9HCJ0 1690 aaKnown RBP15.56■□□□□ 0.08
LMO3-223ENST00000540590 RIC1Q4ADV7 1423 aa15.55■□□□□ 0.08
LMO3-223ENST00000540590 MSL1Q68DK7 614 aa15.55■□□□□ 0.08
LMO3-223ENST00000540590 TPTE2Q6XPS3 522 aa15.55■□□□□ 0.08
LMO3-223ENST00000540590 PDGFDQ9GZP0 370 aaPredicted RBP15.55■□□□□ 0.08
LMO3-223ENST00000540590 DCTPP1Q9H773 170 aa15.55■□□□□ 0.08
LMO3-223ENST00000540590 ANKRD31Q8N7Z5 1873 aa15.54■□□□□ 0.08
LMO3-223ENST00000540590 POLRMTO00411 1230 aaKnown RBP15.54■□□□□ 0.08
LMO3-223ENST00000540590 SERPINB2P05120 415 aa15.54■□□□□ 0.08
LMO3-223ENST00000540590 CSF1RP07333 972 aa15.54■□□□□ 0.08
LMO3-223ENST00000540590 GTF2E1P29083 439 aaPredicted RBP15.54■□□□□ 0.08
LMO3-223ENST00000540590 CTSWP56202 376 aa15.54■□□□□ 0.08
LMO3-223ENST00000540590 SLC10A5Q5PT55 438 aa15.54■□□□□ 0.08
LMO3-223ENST00000540590 SPEF2Q9C093 1822 aa15.53■□□□□ 0.08
LMO3-223ENST00000540590 RFX5P48382 616 aaPredicted RBP15.53■□□□□ 0.08
LMO3-223ENST00000540590 PRR5LQ6MZQ0 368 aa15.53■□□□□ 0.08
LMO3-223ENST00000540590 CNBD1Q8NA66 436 aa15.53■□□□□ 0.08
LMO3-223ENST00000540590 TTLL11Q8NHH1 800 aa15.53■□□□□ 0.08
LMO3-223ENST00000540590 GCC1Q96CN9 775 aa15.53■□□□□ 0.08
LMO3-223ENST00000540590 CHMP3Q9Y3E7 222 aa15.53■□□□□ 0.08
LMO3-223ENST00000540590 MMP10P09238 476 aa15.52■□□□□ 0.08
LMO3-223ENST00000540590 FAM161AQ3B820 660 aa15.52■□□□□ 0.08
LMO3-223ENST00000540590 CCDC24Q8N4L8 307 aa15.52■□□□□ 0.08
LMO3-223ENST00000540590 CCDC85AQ96PX6 553 aaPredicted RBP15.52■□□□□ 0.08
LMO3-223ENST00000540590 PA2G4Q9UQ80 394 aaKnown RBP15.52■□□□□ 0.08
LMO3-223ENST00000540590 EXOC6BQ9Y2D4 811 aa15.52■□□□□ 0.08
LMO3-223ENST00000540590 TAF1P21675 1872 aa15.52■□□□□ 0.07
LMO3-223ENST00000540590 NPHP1O15259 732 aa15.51■□□□□ 0.07
LMO3-223ENST00000540590 C3orf67Q6ZVT6 689 aa15.51■□□□□ 0.07
LMO3-223ENST00000540590 NOP58Q9Y2X3 529 aaKnown RBP15.51■□□□□ 0.07
LMO3-223ENST00000540590 SURF6O75683 361 aaKnown RBP15.5■□□□□ 0.07
LMO3-223ENST00000540590 PTPN12Q05209 780 aaKnown RBP15.5■□□□□ 0.07
LMO3-223ENST00000540590 R3HDM1Q15032 1099 aaKnown RBP15.5■□□□□ 0.07
LMO3-223ENST00000540590 KLHDC4Q8TBB5 520 aa15.5■□□□□ 0.07
LMO3-223ENST00000540590 GREM2Q9H772 168 aa15.5■□□□□ 0.07
LMO3-223ENST00000540590 COPRSQ9NQ92 184 aa15.5■□□□□ 0.07
LMO3-223ENST00000540590 PDZRN3Q9UPQ7 1066 aa15.5■□□□□ 0.07
LMO3-223ENST00000540590 PARP3Q9Y6F1 533 aa15.5■□□□□ 0.07
LMO3-223ENST00000540590 LRP5O75197 1615 aa15.5■□□□□ 0.07
LMO3-223ENST00000540590 RTL9Q8NET4 1388 aa15.49■□□□□ 0.07
LMO3-223ENST00000540590 COL4A1P02462 1669 aa15.49■□□□□ 0.07
LMO3-223ENST00000540590 ST5P78524 1137 aa15.49■□□□□ 0.07
LMO3-223ENST00000540590 SF3B3Q15393 1217 aaKnown RBP15.49■□□□□ 0.07
LMO3-223ENST00000540590 CCDC57Q2TAC2 916 aa15.49■□□□□ 0.07
LMO3-223ENST00000540590 APBB1O00213 710 aa15.48■□□□□ 0.07
LMO3-223ENST00000540590 ITGA6P23229 1130 aa15.48■□□□□ 0.07
LMO3-223ENST00000540590 NUCB1Q02818 461 aa15.48■□□□□ 0.07
LMO3-223ENST00000540590 IFIT5Q13325 482 aaKnown RBP15.48■□□□□ 0.07
LMO3-223ENST00000540590 CCDC152Q4G0S7 254 aa15.48■□□□□ 0.07
LMO3-223ENST00000540590 HSP90AB4PQ58FF6 505 aa15.48■□□□□ 0.07
LMO3-223ENST00000540590 ANKRD45Q5TZF3 282 aa15.48■□□□□ 0.07
LMO3-223ENST00000540590 ZNF594Q96JF6 807 aaPredicted RBP15.48■□□□□ 0.07
LMO3-223ENST00000540590 NLRP3Q96P20 1036 aa15.48■□□□□ 0.07
LMO3-223ENST00000540590 SIL1Q9H173 461 aa15.48■□□□□ 0.07
LMO3-223ENST00000540590 FBXO3Q9UK99 471 aa15.48■□□□□ 0.07
LMO3-223ENST00000540590 ANKRD18BA2A2Z9 1011 aa15.47■□□□□ 0.07
LMO3-223ENST00000540590 RAB11FIP3O75154 756 aa15.47■□□□□ 0.07
LMO3-223ENST00000540590 COL11A2P13942 1736 aaPredicted RBP15.47■□□□□ 0.07
LMO3-223ENST00000540590 SKAP1Q86WV1 359 aa15.47■□□□□ 0.07
LMO3-223ENST00000540590 SEC31BQ9NQW1 1179 aa15.47■□□□□ 0.07
LMO3-223ENST00000540590 PSDA5PKW4 1024 aaPredicted RBP15.46■□□□□ 0.07
LMO3-223ENST00000540590 G3BP1Q13283 466 aaKnown RBP eCLIP15.46■□□□□ 0.07
LMO3-223ENST00000540590 OS9Q13438 667 aaPredicted RBP15.46■□□□□ 0.07
LMO3-223ENST00000540590 CHD1LQ86WJ1 897 aa15.46■□□□□ 0.07
LMO3-223ENST00000540590 A0A1B0GUL6 1792 aa15.46■□□□□ 0.07
LMO3-223ENST00000540590 EYA2O00167 538 aa15.45■□□□□ 0.06
LMO3-223ENST00000540590 SMARCA5O60264 1052 aaPredicted RBP15.45■□□□□ 0.06
LMO3-223ENST00000540590 ZBTB7AO95365 584 aa15.45■□□□□ 0.06
LMO3-223ENST00000540590 TAF7LQ5H9L4 462 aa15.45■□□□□ 0.06
LMO3-223ENST00000540590 SPDYE1Q8NFV5 336 aaPredicted RBP15.45■□□□□ 0.06
LMO3-223ENST00000540590 RHPN1Q8TCX5 695 aa15.45■□□□□ 0.06
LMO3-223ENST00000540590 KIF1BPQ96EK5 621 aa15.45■□□□□ 0.06
LMO3-223ENST00000540590 PUS3Q9BZE2 481 aaKnown RBP15.45■□□□□ 0.06
LMO3-223ENST00000540590 LRRCC1Q9C099 1032 aa15.45■□□□□ 0.06
LMO3-223ENST00000540590 LNPKQ9C0E8 428 aa15.45■□□□□ 0.06
LMO3-223ENST00000540590 CIAO1O76071 339 aa15.44■□□□□ 0.06
LMO3-223ENST00000540590 SASH1O94885 1247 aa15.44■□□□□ 0.06
LMO3-223ENST00000540590 CRY2Q49AN0 593 aa15.44■□□□□ 0.06
LMO3-223ENST00000540590 LRRC24Q50LG9 513 aa15.44■□□□□ 0.06
LMO3-223ENST00000540590 ATG9AQ7Z3C6 839 aa15.44■□□□□ 0.06
LMO3-223ENST00000540590 ERC1Q8IUD2 1116 aa15.44■□□□□ 0.06
LMO3-223ENST00000540590 BRIP1Q9BX63 1249 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms