RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 CRKLP46109 303 aaKnown RBP10.09□□□□□ -0.79
C2CD3-215ENST00000540452 RBM6P78332 1123 aaKnown RBP10.09□□□□□ -0.79
C2CD3-215ENST00000540452 MYT1Q01538 1121 aa10.09□□□□□ -0.79
C2CD3-215ENST00000540452 FAM98CQ17RN3 349 aaKnown RBP10.09□□□□□ -0.79
C2CD3-215ENST00000540452 CCDC57Q2TAC2 916 aa10.09□□□□□ -0.79
C2CD3-215ENST00000540452 TNNI3KQ59H18 835 aa10.09□□□□□ -0.79
C2CD3-215ENST00000540452 INTS5Q6P9B9 1019 aaKnown RBP10.09□□□□□ -0.79
C2CD3-215ENST00000540452 AACSQ86V21 672 aa10.09□□□□□ -0.79
C2CD3-215ENST00000540452 EAF2Q96CJ1 260 aaPredicted RBP10.09□□□□□ -0.79
C2CD3-215ENST00000540452 GJD4Q96KN9 370 aaPredicted RBP10.09□□□□□ -0.79
C2CD3-215ENST00000540452 PA2G4Q9UQ80 394 aaKnown RBP10.09□□□□□ -0.79
C2CD3-215ENST00000540452 FPGT-TNNI3KV9GXZ4 949 aa10.09□□□□□ -0.79
C2CD3-215ENST00000540452 COL24A1Q17RW2 1714 aa10.09□□□□□ -0.79
C2CD3-215ENST00000540452 ST18O60284 1047 aa10.08□□□□□ -0.8
C2CD3-215ENST00000540452 PIP4K2AP48426 406 aaPredicted RBP10.08□□□□□ -0.8
C2CD3-215ENST00000540452 LRRFIP1Q32MZ4 808 aaKnown RBP10.08□□□□□ -0.8
C2CD3-215ENST00000540452 IFFO2Q5TF58 517 aa10.08□□□□□ -0.8
C2CD3-215ENST00000540452 NUTM1Q86Y26 1132 aa10.08□□□□□ -0.8
C2CD3-215ENST00000540452 RILPL2Q969X0 211 aa10.08□□□□□ -0.8
C2CD3-215ENST00000540452 DDX60Q8IY21 1712 aaKnown RBP10.07□□□□□ -0.8
C2CD3-215ENST00000540452 K7ELQ4 463 aaPredicted RBP10.07□□□□□ -0.8
C2CD3-215ENST00000540452 CTSWP56202 376 aa10.07□□□□□ -0.8
C2CD3-215ENST00000540452 IFIT5Q13325 482 aaKnown RBP10.07□□□□□ -0.8
C2CD3-215ENST00000540452 ATG9AQ7Z3C6 839 aa10.07□□□□□ -0.8
C2CD3-215ENST00000540452 ZNF512BQ96KM6 892 aaPredicted RBP10.07□□□□□ -0.8
C2CD3-215ENST00000540452 SH3TC1Q8TE82 1336 aa10.07□□□□□ -0.8
C2CD3-215ENST00000540452 ZBTB22O15209 634 aa10.06□□□□□ -0.8
C2CD3-215ENST00000540452 CAMTA2O94983 1202 aa10.06□□□□□ -0.8
C2CD3-215ENST00000540452 KIAA1211Q6ZU35 1233 aa10.06□□□□□ -0.8
C2CD3-215ENST00000540452 HAUS7Q99871 368 aa10.06□□□□□ -0.8
C2CD3-215ENST00000540452 ANTXR1Q9H6X2 564 aa10.06□□□□□ -0.8
C2CD3-215ENST00000540452 DIAPH3Q9NSV4 1193 aa10.06□□□□□ -0.8
C2CD3-215ENST00000540452 CEP126Q9P2H0 1117 aa10.06□□□□□ -0.8
C2CD3-215ENST00000540452 SRCAPQ6ZRS2 3230 aa10.06□□□□□ -0.8
C2CD3-215ENST00000540452 RIC1Q4ADV7 1423 aa10.06□□□□□ -0.8
C2CD3-215ENST00000540452 AFF2P51816 1311 aa10.06□□□□□ -0.8
C2CD3-215ENST00000540452 ANKRD18BA2A2Z9 1011 aa10.05□□□□□ -0.8
C2CD3-215ENST00000540452 HSPA4P34932 840 aa10.05□□□□□ -0.8
C2CD3-215ENST00000540452 TFCP2Q12800 502 aa10.05□□□□□ -0.8
C2CD3-215ENST00000540452 ITPK1Q13572 414 aa10.05□□□□□ -0.8
C2CD3-215ENST00000540452 HLFQ16534 295 aa10.05□□□□□ -0.8
C2CD3-215ENST00000540452 TTLL11Q8NHH1 800 aa10.05□□□□□ -0.8
C2CD3-215ENST00000540452 KCNB2Q92953 911 aa10.05□□□□□ -0.8
C2CD3-215ENST00000540452 TM6SF1Q9BZW5 370 aa10.05□□□□□ -0.8
C2CD3-215ENST00000540452 CHMP5Q9NZZ3 219 aa10.05□□□□□ -0.8
C2CD3-215ENST00000540452 TRMT112Q9UI30 125 aaKnown RBP10.05□□□□□ -0.8
C2CD3-215ENST00000540452 RGPD3A6NKT7 1758 aaPredicted RBP10.04□□□□□ -0.8
C2CD3-215ENST00000540452 RGPD4Q7Z3J3 1758 aa10.04□□□□□ -0.8
C2CD3-215ENST00000540452 MYH7P12883 1935 aa10.04□□□□□ -0.8
C2CD3-215ENST00000540452 IRS4O14654 1257 aaPredicted RBP10.04□□□□□ -0.8
C2CD3-215ENST00000540452 RPS6KA4O75676 772 aa10.04□□□□□ -0.8
C2CD3-215ENST00000540452 DDIT3P35638 169 aa10.04□□□□□ -0.8
C2CD3-215ENST00000540452 ACSBG1Q96GR2 724 aa10.04□□□□□ -0.8
C2CD3-215ENST00000540452 UTP14AQ9BVJ6 771 aaKnown RBP10.04□□□□□ -0.8
C2CD3-215ENST00000540452 BCL11BQ9C0K0 894 aaPredicted RBP10.04□□□□□ -0.8
C2CD3-215ENST00000540452 NYXQ9GZU5 481 aa10.04□□□□□ -0.8
C2CD3-215ENST00000540452 SIL1Q9H173 461 aa10.04□□□□□ -0.8
C2CD3-215ENST00000540452 CWC22Q9HCG8 908 aaKnown RBP10.04□□□□□ -0.8
C2CD3-215ENST00000540452 ANO2Q9NQ90 1003 aa10.04□□□□□ -0.8
C2CD3-215ENST00000540452 DBNLQ9UJU6 430 aaKnown RBP10.04□□□□□ -0.8
C2CD3-215ENST00000540452 C4BP0C0L5 1744 aa10.04□□□□□ -0.8
C2CD3-215ENST00000540452 UBN2Q6ZU65 1347 aa10.04□□□□□ -0.8
C2CD3-215ENST00000540452 MROH5Q6ZUA9 1318 aa10.04□□□□□ -0.8
C2CD3-215ENST00000540452 MED23Q9ULK4 1368 aa10.03□□□□□ -0.8
C2CD3-215ENST00000540452 IGSF3O75054 1194 aa10.03□□□□□ -0.8
C2CD3-215ENST00000540452 ZFYP08048 801 aaPredicted RBP10.03□□□□□ -0.8
C2CD3-215ENST00000540452 C4AP0C0L4 1744 aa10.03□□□□□ -0.8
C2CD3-215ENST00000540452 PDIA4P13667 645 aaKnown RBP10.03□□□□□ -0.8
C2CD3-215ENST00000540452 PTMSP20962 102 aa10.03□□□□□ -0.8
C2CD3-215ENST00000540452 CCDC152Q4G0S7 254 aa10.03□□□□□ -0.8
C2CD3-215ENST00000540452 TAF7LQ5H9L4 462 aa10.03□□□□□ -0.8
C2CD3-215ENST00000540452 SLC27A3Q5K4L6 730 aa10.03□□□□□ -0.8
C2CD3-215ENST00000540452 TSHZ3Q63HK5 1081 aa10.03□□□□□ -0.8
C2CD3-215ENST00000540452 KBTBD3Q8NAB2 608 aa10.03□□□□□ -0.8
C2CD3-215ENST00000540452 FAM89AQ96GI7 184 aa10.03□□□□□ -0.8
C2CD3-215ENST00000540452 LSG1Q9H089 658 aaKnown RBP10.03□□□□□ -0.8
C2CD3-215ENST00000540452 QTRT2Q9H974 415 aaKnown RBP10.03□□□□□ -0.8
C2CD3-215ENST00000540452 HMG20BQ9P0W2 317 aa10.03□□□□□ -0.8
C2CD3-215ENST00000540452 CHMP3Q9Y3E7 222 aa10.03□□□□□ -0.8
C2CD3-215ENST00000540452 ZNF330Q9Y3S2 320 aaPredicted RBP10.03□□□□□ -0.8
C2CD3-215ENST00000540452 RIPOR2Q9Y4F9 1068 aa10.03□□□□□ -0.8
C2CD3-215ENST00000540452 CASZ1Q86V15 1759 aa10.02□□□□□ -0.81
C2CD3-215ENST00000540452 NTSR2O95665 410 aa10.02□□□□□ -0.81
C2CD3-215ENST00000540452 ITGA6P23229 1130 aa10.02□□□□□ -0.81
C2CD3-215ENST00000540452 SF3B2Q13435 895 aaKnown RBP10.02□□□□□ -0.81
C2CD3-215ENST00000540452 TSGA10IPQ3SY00 556 aa10.02□□□□□ -0.81
C2CD3-215ENST00000540452 CCDC158Q5M9N0 1113 aa10.02□□□□□ -0.81
C2CD3-215ENST00000540452 RNF20Q5VTR2 975 aa10.02□□□□□ -0.81
C2CD3-215ENST00000540452 TMED8Q6PL24 325 aaPredicted RBP10.02□□□□□ -0.81
C2CD3-215ENST00000540452 FAM196AQ6ZSG2 479 aa10.02□□□□□ -0.81
C2CD3-215ENST00000540452 KLHDC4Q8TBB5 520 aa10.02□□□□□ -0.81
C2CD3-215ENST00000540452 INTS4Q96HW7 963 aaKnown RBP10.02□□□□□ -0.81
C2CD3-215ENST00000540452 CCDC8Q9H0W5 538 aaPredicted RBP10.02□□□□□ -0.81
C2CD3-215ENST00000540452 NARFQ9UHQ1 456 aa10.02□□□□□ -0.81
C2CD3-215ENST00000540452 CCDC171Q6TFL3 1326 aa10.02□□□□□ -0.81
C2CD3-215ENST00000540452 A0A1B0GUL7 405 aa10.01□□□□□ -0.81
C2CD3-215ENST00000540452 KCNQ2O43526 872 aa10.01□□□□□ -0.81
C2CD3-215ENST00000540452 YY1P25490 414 aa10.01□□□□□ -0.81
C2CD3-215ENST00000540452 RTL5Q5HYW3 569 aaPredicted RBP10.01□□□□□ -0.81
C2CD3-215ENST00000540452 SLC10A5Q5PT55 438 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms