RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 CPDO75976 1380 aa18.02■□□□□ 0.47
GABARAPL1-208ENST00000540424 CHRM1P11229 460 aaPredicted RBP18.01■□□□□ 0.47
GABARAPL1-208ENST00000540424 SLC39A6Q13433 755 aa18.01■□□□□ 0.47
GABARAPL1-208ENST00000540424 FMNL2Q96PY5 1086 aa18.01■□□□□ 0.47
GABARAPL1-208ENST00000540424 CCDC183Q5T5S1 534 aa18.01■□□□□ 0.47
GABARAPL1-208ENST00000540424 METTL22Q9BUU2 404 aaPredicted RBP18.01■□□□□ 0.47
GABARAPL1-208ENST00000540424 LSG1Q9H089 658 aaKnown RBP18.01■□□□□ 0.47
GABARAPL1-208ENST00000540424 BICC1Q9H694 974 aaKnown RBP18.01■□□□□ 0.47
GABARAPL1-208ENST00000540424 FAM53CQ9NYF3 392 aa18.01■□□□□ 0.47
GABARAPL1-208ENST00000540424 SPATA31A3Q5VYP0 1347 aa18■□□□□ 0.47
GABARAPL1-208ENST00000540424 GOLGA6L6A8MZA4 724 aa18■□□□□ 0.47
GABARAPL1-208ENST00000540424 AACSQ86V21 672 aa18■□□□□ 0.47
GABARAPL1-208ENST00000540424 NEURL1BA8MQ27 555 aa18■□□□□ 0.47
GABARAPL1-208ENST00000540424 CWC27Q6UX04 472 aaKnown RBP18■□□□□ 0.47
GABARAPL1-208ENST00000540424 XAGE3Q8WTP9 111 aa18■□□□□ 0.47
GABARAPL1-208ENST00000540424 MYL6BP14649 208 aa17.99■□□□□ 0.47
GABARAPL1-208ENST00000540424 ZNF496Q96IT1 587 aaPredicted RBP17.99■□□□□ 0.47
GABARAPL1-208ENST00000540424 PA2G4Q9UQ80 394 aaKnown RBP17.99■□□□□ 0.47
GABARAPL1-208ENST00000540424 IGKV5-2P06315 115 aa17.99■□□□□ 0.47
GABARAPL1-208ENST00000540424 GCKRQ14397 625 aa17.99■□□□□ 0.47
GABARAPL1-208ENST00000540424 ANKRD13DQ6ZTN6 518 aa17.99■□□□□ 0.47
GABARAPL1-208ENST00000540424 COPS6Q7L5N1 327 aa17.99■□□□□ 0.47
GABARAPL1-208ENST00000540424 UPF3BQ9BZI7 483 aaKnown RBP17.99■□□□□ 0.47
GABARAPL1-208ENST00000540424 CABP4P57796 275 aa17.98■□□□□ 0.47
GABARAPL1-208ENST00000540424 DDX17Q92841 729 aaKnown RBP17.98■□□□□ 0.47
GABARAPL1-208ENST00000540424 IL25Q9H293 177 aa17.98■□□□□ 0.47
GABARAPL1-208ENST00000540424 SNX14Q9Y5W7 946 aa17.98■□□□□ 0.47
GABARAPL1-208ENST00000540424 KAZALD1Q96I82 304 aa17.98■□□□□ 0.47
GABARAPL1-208ENST00000540424 MYD88Q99836 296 aa17.98■□□□□ 0.47
GABARAPL1-208ENST00000540424 PAXBP1Q9Y5B6 917 aa17.98■□□□□ 0.47
GABARAPL1-208ENST00000540424 C5P01031 1676 aa17.97■□□□□ 0.47
GABARAPL1-208ENST00000540424 PKD1L3Q7Z443 1732 aa17.97■□□□□ 0.47
GABARAPL1-208ENST00000540424 TMEM87AQ8NBN3 555 aa17.97■□□□□ 0.47
GABARAPL1-208ENST00000540424 CABLES1Q8TDN4 633 aa17.97■□□□□ 0.47
GABARAPL1-208ENST00000540424 CYP27B1O15528 508 aa17.97■□□□□ 0.47
GABARAPL1-208ENST00000540424 HCLS1P14317 486 aaPredicted RBP17.97■□□□□ 0.47
GABARAPL1-208ENST00000540424 FOXD4L5Q5VV16 416 aaPredicted RBP17.97■□□□□ 0.47
GABARAPL1-208ENST00000540424 RGS22Q8NE09 1264 aa17.97■□□□□ 0.47
GABARAPL1-208ENST00000540424 ZNF397Q8NF99 534 aaPredicted RBP17.97■□□□□ 0.47
GABARAPL1-208ENST00000540424 FOXD4L4Q8WXT5 416 aaPredicted RBP17.97■□□□□ 0.47
GABARAPL1-208ENST00000540424 TRIM34Q9BYJ4 488 aa17.97■□□□□ 0.47
GABARAPL1-208ENST00000540424 CHRNA2Q15822 529 aa17.96■□□□□ 0.47
GABARAPL1-208ENST00000540424 COL15A1P39059 1388 aa17.96■□□□□ 0.46
GABARAPL1-208ENST00000540424 SASH1O94885 1247 aa17.95■□□□□ 0.46
GABARAPL1-208ENST00000540424 ZFP91Q96JP5 570 aaPredicted RBP17.95■□□□□ 0.46
GABARAPL1-208ENST00000540424 WDR33Q9C0J8 1336 aaKnown RBP17.95■□□□□ 0.46
GABARAPL1-208ENST00000540424 GADD45BO75293 160 aaPredicted RBP17.95■□□□□ 0.46
GABARAPL1-208ENST00000540424 NOL8Q76FK4 1167 aaKnown RBP17.95■□□□□ 0.46
GABARAPL1-208ENST00000540424 TM6SF1Q9BZW5 370 aa17.94■□□□□ 0.46
GABARAPL1-208ENST00000540424 LIMCH1Q9UPQ0 1083 aa17.94■□□□□ 0.46
GABARAPL1-208ENST00000540424 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.94■□□□□ 0.46
GABARAPL1-208ENST00000540424 USP48Q86UV5 1035 aa17.94■□□□□ 0.46
GABARAPL1-208ENST00000540424 EAF2Q96CJ1 260 aaPredicted RBP17.94■□□□□ 0.46
GABARAPL1-208ENST00000540424 YY1AP1Q9H869 796 aa17.94■□□□□ 0.46
GABARAPL1-208ENST00000540424 EFCC1Q9HA90 598 aa17.94■□□□□ 0.46
GABARAPL1-208ENST00000540424 ZKSCAN1P17029 563 aaPredicted RBP17.93■□□□□ 0.46
GABARAPL1-208ENST00000540424 TTC14Q96N46 770 aa17.93■□□□□ 0.46
GABARAPL1-208ENST00000540424 USP16Q9Y5T5 823 aa17.93■□□□□ 0.46
GABARAPL1-208ENST00000540424 PARP4Q9UKK3 1724 aaKnown RBP17.93■□□□□ 0.46
GABARAPL1-208ENST00000540424 MAPK8IP2Q13387 824 aaPredicted RBP17.93■□□□□ 0.46
GABARAPL1-208ENST00000540424 LRP10Q7Z4F1 713 aa17.93■□□□□ 0.46
GABARAPL1-208ENST00000540424 CCDC112Q8NEF3 446 aa17.93■□□□□ 0.46
GABARAPL1-208ENST00000540424 KCNB2Q92953 911 aa17.93■□□□□ 0.46
GABARAPL1-208ENST00000540424 COPRSQ9NQ92 184 aa17.93■□□□□ 0.46
GABARAPL1-208ENST00000540424 FEZ2Q9UHY8 353 aaPredicted RBP17.93■□□□□ 0.46
GABARAPL1-208ENST00000540424 PCDH11XQ9BZA7 1347 aa17.93■□□□□ 0.46
GABARAPL1-208ENST00000540424 PCDH11YQ9BZA8 1340 aa17.93■□□□□ 0.46
GABARAPL1-208ENST00000540424 PLBD2Q8NHP8 589 aa17.92■□□□□ 0.46
GABARAPL1-208ENST00000540424 FUCA2Q9BTY2 467 aa17.92■□□□□ 0.46
GABARAPL1-208ENST00000540424 ERICH4A6NGS2 130 aa17.92■□□□□ 0.46
GABARAPL1-208ENST00000540424 ZSCAN31Q96LW9 406 aaPredicted RBP17.92■□□□□ 0.46
GABARAPL1-208ENST00000540424 CCDC8Q9H0W5 538 aaPredicted RBP17.92■□□□□ 0.46
GABARAPL1-208ENST00000540424 TOM1O60784 492 aa17.91■□□□□ 0.46
GABARAPL1-208ENST00000540424 CYP2C19P33261 490 aa17.91■□□□□ 0.46
GABARAPL1-208ENST00000540424 AK2P54819 239 aa17.91■□□□□ 0.46
GABARAPL1-208ENST00000540424 VPS53Q5VIR6 699 aa17.91■□□□□ 0.46
GABARAPL1-208ENST00000540424 RASEFQ8IZ41 740 aa17.91■□□□□ 0.46
GABARAPL1-208ENST00000540424 SIL1Q9H173 461 aa17.91■□□□□ 0.46
GABARAPL1-208ENST00000540424 SNRKQ9NRH2 765 aa17.91■□□□□ 0.46
GABARAPL1-208ENST00000540424 CYP46A1Q9Y6A2 500 aa17.91■□□□□ 0.46
GABARAPL1-208ENST00000540424 CCDC171Q6TFL3 1326 aa17.91■□□□□ 0.46
GABARAPL1-208ENST00000540424 WDR17Q8IZU2 1322 aa17.91■□□□□ 0.46
GABARAPL1-208ENST00000540424 CASTP20810 708 aaKnown RBP17.9■□□□□ 0.46
GABARAPL1-208ENST00000540424 SLFNL1Q499Z3 407 aa17.9■□□□□ 0.46
GABARAPL1-208ENST00000540424 AP5Z1O43299 807 aa17.9■□□□□ 0.46
GABARAPL1-208ENST00000540424 RABL6Q3YEC7 729 aaPredicted RBP17.9■□□□□ 0.46
GABARAPL1-208ENST00000540424 RNF20Q5VTR2 975 aa17.9■□□□□ 0.46
GABARAPL1-208ENST00000540424 ZCRB1Q8TBF4 217 aaKnown RBP17.9■□□□□ 0.46
GABARAPL1-208ENST00000540424 FSD1Q9BTV5 496 aa17.9■□□□□ 0.46
GABARAPL1-208ENST00000540424 LAMB4A4D0S4 1761 aa17.9■□□□□ 0.46
GABARAPL1-208ENST00000540424 ERVV-2B6SEH9 535 aa17.89■□□□□ 0.46
GABARAPL1-208ENST00000540424 TNNT1P13805 278 aa17.89■□□□□ 0.46
GABARAPL1-208ENST00000540424 PSMA5P28066 241 aa17.89■□□□□ 0.46
GABARAPL1-208ENST00000540424 PRDM11Q9NQV5 511 aa17.89■□□□□ 0.46
GABARAPL1-208ENST00000540424 SH2B1Q9NRF2 756 aaPredicted RBP17.89■□□□□ 0.46
GABARAPL1-208ENST00000540424 PDRG1Q9NUG6 133 aa17.89■□□□□ 0.46
GABARAPL1-208ENST00000540424 KMT5BQ4FZB7 885 aa17.89■□□□□ 0.45
GABARAPL1-208ENST00000540424 PRPF40BQ6NWY9 871 aaKnown RBP17.89■□□□□ 0.45
GABARAPL1-208ENST00000540424 BRINP3Q76B58 766 aa17.89■□□□□ 0.45
GABARAPL1-208ENST00000540424 ZSWIM6Q9HCJ5 1215 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms