RNA–Protein interactions for RNA: ENST00000539856.5

CWC15-202, Transcript of CWC15 spliceosome associated protein homolog, humanhuman

TSL 2

Gene CWC15, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC15-202ENST00000539856 FLIIQ13045 1269 aa13.04□□□□□ -0.32
CWC15-202ENST00000539856 TRMT2AQ8IZ69 625 aaKnown RBP13.04□□□□□ -0.32
CWC15-202ENST00000539856 PI4KAP1Q8N8J0 262 aa13.04□□□□□ -0.32
CWC15-202ENST00000539856 METTL22Q9BUU2 404 aaPredicted RBP13.04□□□□□ -0.32
CWC15-202ENST00000539856 BMP2KQ9NSY1 1161 aaPredicted RBP13.04□□□□□ -0.32
CWC15-202ENST00000539856 MAP3K2Q9Y2U5 619 aa13.04□□□□□ -0.32
CWC15-202ENST00000539856 TTLL13PA6NNM8 815 aa13.03□□□□□ -0.32
CWC15-202ENST00000539856 ALDH1B1P30837 517 aa13.03□□□□□ -0.32
CWC15-202ENST00000539856 NEXNQ0ZGT2 675 aa13.03□□□□□ -0.32
CWC15-202ENST00000539856 FKBP5Q13451 457 aaPredicted RBP13.03□□□□□ -0.32
CWC15-202ENST00000539856 ZNF428Q96B54 188 aa13.03□□□□□ -0.32
CWC15-202ENST00000539856 SH3TC1Q8TE82 1336 aa13.03□□□□□ -0.32
CWC15-202ENST00000539856 DLEC1Q9Y238 1755 aa13.02□□□□□ -0.32
CWC15-202ENST00000539856 ARFGEF2Q9Y6D5 1785 aa13.02□□□□□ -0.32
CWC15-202ENST00000539856 ARFGEF1Q9Y6D6 1849 aa13.02□□□□□ -0.32
CWC15-202ENST00000539856 ATMINO43313 823 aaPredicted RBP13.02□□□□□ -0.33
CWC15-202ENST00000539856 ASTLQ6HA08 431 aaPredicted RBP13.02□□□□□ -0.33
CWC15-202ENST00000539856 CCDC191Q8NCU4 936 aa13.02□□□□□ -0.33
CWC15-202ENST00000539856 RPGRQ92834 1020 aaKnown RBP13.01□□□□□ -0.33
CWC15-202ENST00000539856 FAM89AQ96GI7 184 aa13.01□□□□□ -0.33
CWC15-202ENST00000539856 RBM17Q96I25 401 aaKnown RBP13.01□□□□□ -0.33
CWC15-202ENST00000539856 CWC25Q9NXE8 425 aaPredicted RBP13.01□□□□□ -0.33
CWC15-202ENST00000539856 ABCC12Q96J65 1359 aa13.01□□□□□ -0.33
CWC15-202ENST00000539856 RIC1Q4ADV7 1423 aa13□□□□□ -0.33
CWC15-202ENST00000539856 ADCY9O60503 1353 aa13□□□□□ -0.33
CWC15-202ENST00000539856 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13□□□□□ -0.33
CWC15-202ENST00000539856 C21orf2O43822 256 aa13□□□□□ -0.33
CWC15-202ENST00000539856 CT47B1P0C2W7 299 aaPredicted RBP13□□□□□ -0.33
CWC15-202ENST00000539856 HCLS1P14317 486 aaPredicted RBP13□□□□□ -0.33
CWC15-202ENST00000539856 HSP90B1P14625 803 aaKnown RBP13□□□□□ -0.33
CWC15-202ENST00000539856 CRY2Q49AN0 593 aa13□□□□□ -0.33
CWC15-202ENST00000539856 SYNE4Q8N205 404 aa13□□□□□ -0.33
CWC15-202ENST00000539856 DNAAF4Q8WXU2 420 aa13□□□□□ -0.33
CWC15-202ENST00000539856 ZFP91Q96JP5 570 aaPredicted RBP13□□□□□ -0.33
CWC15-202ENST00000539856 COL11A2P13942 1736 aaPredicted RBP12.99□□□□□ -0.33
CWC15-202ENST00000539856 IRS4O14654 1257 aaPredicted RBP12.99□□□□□ -0.33
CWC15-202ENST00000539856 POTEIP0CG38 1075 aa12.99□□□□□ -0.33
CWC15-202ENST00000539856 HOXA10P31260 410 aaPredicted RBP12.99□□□□□ -0.33
CWC15-202ENST00000539856 ALDH1L2Q3SY69 923 aa12.99□□□□□ -0.33
CWC15-202ENST00000539856 RTL5Q5HYW3 569 aaPredicted RBP12.99□□□□□ -0.33
CWC15-202ENST00000539856 SOGA3Q5TF21 947 aa12.99□□□□□ -0.33
CWC15-202ENST00000539856 PRPF40BQ6NWY9 871 aaKnown RBP12.99□□□□□ -0.33
CWC15-202ENST00000539856 MRPL50Q8N5N7 158 aaKnown RBP12.99□□□□□ -0.33
CWC15-202ENST00000539856 ZBTB38Q8NAP3 1195 aaPredicted RBP12.99□□□□□ -0.33
CWC15-202ENST00000539856 CRAMP1Q96RY5 1269 aa12.99□□□□□ -0.33
CWC15-202ENST00000539856 CACNA1SQ13698 1873 aa12.98□□□□□ -0.33
CWC15-202ENST00000539856 SLX4Q8IY92 1834 aa12.98□□□□□ -0.33
CWC15-202ENST00000539856 PCCAP05165 728 aaPredicted RBP12.98□□□□□ -0.33
CWC15-202ENST00000539856 IGKV5-2P06315 115 aa12.98□□□□□ -0.33
CWC15-202ENST00000539856 ATN1P54259 1190 aaPredicted RBP12.98□□□□□ -0.33
CWC15-202ENST00000539856 SSH1Q8WYL5 1049 aa12.98□□□□□ -0.33
CWC15-202ENST00000539856 TNRC6CQ9HCJ0 1690 aaKnown RBP12.97□□□□□ -0.33
CWC15-202ENST00000539856 NEURL1BA8MQ27 555 aa12.97□□□□□ -0.33
CWC15-202ENST00000539856 CWF19L2Q2TBE0 894 aaKnown RBP12.97□□□□□ -0.33
CWC15-202ENST00000539856 C3orf67Q6ZVT6 689 aa12.97□□□□□ -0.33
CWC15-202ENST00000539856 DDX46Q7L014 1031 aaKnown RBP12.97□□□□□ -0.33
CWC15-202ENST00000539856 LINS1Q8NG48 757 aa12.97□□□□□ -0.33
CWC15-202ENST00000539856 ZBED9Q6R2W3 1325 aa12.96□□□□□ -0.33
CWC15-202ENST00000539856 F6X3S4 739 aa12.96□□□□□ -0.33
CWC15-202ENST00000539856 STK25O00506 426 aa12.96□□□□□ -0.33
CWC15-202ENST00000539856 PDE8AO60658 829 aa12.96□□□□□ -0.33
CWC15-202ENST00000539856 SF3B3Q15393 1217 aaKnown RBP12.96□□□□□ -0.33
CWC15-202ENST00000539856 CC2D2BQ6DHV5 1058 aa12.96□□□□□ -0.33
CWC15-202ENST00000539856 JARID2Q92833 1246 aaPredicted RBP12.96□□□□□ -0.33
CWC15-202ENST00000539856 TMX4Q9H1E5 349 aaPredicted RBP12.96□□□□□ -0.33
CWC15-202ENST00000539856 PTPRCP08575 1304 aa12.95□□□□□ -0.34
CWC15-202ENST00000539856 CDHR2Q9BYE9 1310 aa12.95□□□□□ -0.34
CWC15-202ENST00000539856 H7C1W4 665 aa12.95□□□□□ -0.34
CWC15-202ENST00000539856 BBOX1O75936 387 aa12.95□□□□□ -0.34
CWC15-202ENST00000539856 GCKRQ14397 625 aa12.95□□□□□ -0.34
CWC15-202ENST00000539856 CCDC93Q567U6 631 aa12.95□□□□□ -0.34
CWC15-202ENST00000539856 RTKN2Q8IZC4 609 aa12.95□□□□□ -0.34
CWC15-202ENST00000539856 C7orf43Q8WVR3 580 aa12.95□□□□□ -0.34
CWC15-202ENST00000539856 BCL2L13Q9BXK5 485 aa12.95□□□□□ -0.34
CWC15-202ENST00000539856 SMC4Q9NTJ3 1288 aa12.95□□□□□ -0.34
CWC15-202ENST00000539856 LMNB1P20700 586 aa12.94□□□□□ -0.34
CWC15-202ENST00000539856 GRIPAP1Q4V328 841 aa12.94□□□□□ -0.34
CWC15-202ENST00000539856 BEND3Q5T5X7 828 aa12.94□□□□□ -0.34
CWC15-202ENST00000539856 C9orf131Q5VYM1 1079 aa12.94□□□□□ -0.34
CWC15-202ENST00000539856 SLC4A10Q6U841 1118 aa12.94□□□□□ -0.34
CWC15-202ENST00000539856 LAMB2P55268 1798 aa12.94□□□□□ -0.34
CWC15-202ENST00000539856 DDX60Q8IY21 1712 aaKnown RBP12.93□□□□□ -0.34
CWC15-202ENST00000539856 SBF1O95248 1867 aa12.93□□□□□ -0.34
CWC15-202ENST00000539856 CCDC88AQ3V6T2 1871 aa12.93□□□□□ -0.34
CWC15-202ENST00000539856 ABCC4O15439 1325 aa12.93□□□□□ -0.34
CWC15-202ENST00000539856 NFKBIEO00221 500 aa12.93□□□□□ -0.34
CWC15-202ENST00000539856 PPEF1O14829 653 aaPredicted RBP12.93□□□□□ -0.34
CWC15-202ENST00000539856 ALDH1L1O75891 902 aa12.93□□□□□ -0.34
CWC15-202ENST00000539856 RASSF7Q02833 373 aa12.93□□□□□ -0.34
CWC15-202ENST00000539856 GRAPQ13588 217 aa12.93□□□□□ -0.34
CWC15-202ENST00000539856 GRAPLQ8TC17 118 aaPredicted RBP12.93□□□□□ -0.34
CWC15-202ENST00000539856 SRCIN1Q9C0H9 1055 aa12.93□□□□□ -0.34
CWC15-202ENST00000539856 TAOK3Q9H2K8 898 aa12.93□□□□□ -0.34
CWC15-202ENST00000539856 RNF181Q9P0P0 153 aa12.93□□□□□ -0.34
CWC15-202ENST00000539856 FER1L6Q2WGJ9 1857 aa12.93□□□□□ -0.34
CWC15-202ENST00000539856 RARSP54136 660 aaKnown RBP12.92□□□□□ -0.34
CWC15-202ENST00000539856 BRPF1P55201 1214 aaPredicted RBP12.92□□□□□ -0.34
CWC15-202ENST00000539856 CCDC152Q4G0S7 254 aa12.92□□□□□ -0.34
CWC15-202ENST00000539856 UBE3BQ7Z3V4 1068 aa12.92□□□□□ -0.34
CWC15-202ENST00000539856 TMC4Q7Z404 712 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms