RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 PLA2G12BQ9BX93 195 aa21.92■■□□□ 1.1
SLC3A2-213ENST00000539458 CTSWP56202 376 aa21.91■■□□□ 1.1
SLC3A2-213ENST00000539458 INTS3Q68E01 1043 aaKnown RBP21.91■■□□□ 1.1
SLC3A2-213ENST00000539458 DDX46Q7L014 1031 aaKnown RBP21.91■■□□□ 1.1
SLC3A2-213ENST00000539458 SLX4Q8IY92 1834 aa21.91■■□□□ 1.1
SLC3A2-213ENST00000539458 MYH3P11055 1940 aa21.9■■□□□ 1.1
SLC3A2-213ENST00000539458 CCDC152Q4G0S7 254 aa21.9■■□□□ 1.1
SLC3A2-213ENST00000539458 CLUAP1Q96AJ1 413 aa21.9■■□□□ 1.1
SLC3A2-213ENST00000539458 TNNQ9UQP3 1299 aa21.9■■□□□ 1.1
SLC3A2-213ENST00000539458 NBPF7P0C2Y1 421 aaPredicted RBP21.89■■□□□ 1.09
SLC3A2-213ENST00000539458 HSPA6P17066 643 aa21.88■■□□□ 1.09
SLC3A2-213ENST00000539458 GRAPQ13588 217 aa21.88■■□□□ 1.09
SLC3A2-213ENST00000539458 TTLL11Q8NHH1 800 aa21.88■■□□□ 1.09
SLC3A2-213ENST00000539458 GRAPLQ8TC17 118 aaPredicted RBP21.88■■□□□ 1.09
SLC3A2-213ENST00000539458 USP44Q9H0E7 712 aa21.88■■□□□ 1.09
SLC3A2-213ENST00000539458 RTL9Q8NET4 1388 aa21.87■■□□□ 1.09
SLC3A2-213ENST00000539458 C21orf2O43822 256 aa21.87■■□□□ 1.09
SLC3A2-213ENST00000539458 SOGA3Q5TF21 947 aa21.87■■□□□ 1.09
SLC3A2-213ENST00000539458 FTSJ3Q8IY81 847 aaKnown RBP21.87■■□□□ 1.09
SLC3A2-213ENST00000539458 DZIP1LQ8IYY4 767 aaKnown RBP21.87■■□□□ 1.09
SLC3A2-213ENST00000539458 C7orf43Q8WVR3 580 aa21.87■■□□□ 1.09
SLC3A2-213ENST00000539458 PPEF1O14829 653 aaPredicted RBP21.86■■□□□ 1.09
SLC3A2-213ENST00000539458 FOXO4P98177 505 aa21.86■■□□□ 1.09
SLC3A2-213ENST00000539458 ZNF219Q9P2Y4 722 aaPredicted RBP21.86■■□□□ 1.09
SLC3A2-213ENST00000539458 BBOX1O75936 387 aa21.85■■□□□ 1.09
SLC3A2-213ENST00000539458 CSF1RP07333 972 aa21.85■■□□□ 1.09
SLC3A2-213ENST00000539458 IFFO2Q5TF58 517 aa21.85■■□□□ 1.09
SLC3A2-213ENST00000539458 SUCLG2Q96I99 432 aa21.85■■□□□ 1.09
SLC3A2-213ENST00000539458 CCDC85AQ96PX6 553 aaPredicted RBP21.85■■□□□ 1.09
SLC3A2-213ENST00000539458 COL4A1P02462 1669 aa21.85■■□□□ 1.09
SLC3A2-213ENST00000539458 MS4A1P11836 297 aa21.84■■□□□ 1.09
SLC3A2-213ENST00000539458 ARHGAP27Q6ZUM4 889 aa21.84■■□□□ 1.09
SLC3A2-213ENST00000539458 TMC4Q7Z404 712 aa21.84■■□□□ 1.09
SLC3A2-213ENST00000539458 TMEM57Q8N5G2 664 aa21.84■■□□□ 1.09
SLC3A2-213ENST00000539458 GREM2Q9H772 168 aa21.84■■□□□ 1.09
SLC3A2-213ENST00000539458 SEC31BQ9NQW1 1179 aa21.84■■□□□ 1.09
SLC3A2-213ENST00000539458 TAF1P21675 1872 aa21.83■■□□□ 1.09
SLC3A2-213ENST00000539458 LRRC37AA6NMS7 1700 aa21.83■■□□□ 1.09
SLC3A2-213ENST00000539458 CCDC93Q567U6 631 aa21.83■■□□□ 1.09
SLC3A2-213ENST00000539458 EPHA10Q5JZY3 1008 aa21.83■■□□□ 1.09
SLC3A2-213ENST00000539458 CC2D2BQ6DHV5 1058 aa21.83■■□□□ 1.09
SLC3A2-213ENST00000539458 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.83■■□□□ 1.09
SLC3A2-213ENST00000539458 CELF1Q92879 486 aaKnown RBP21.83■■□□□ 1.09
SLC3A2-213ENST00000539458 KAZALD1Q96I82 304 aa21.83■■□□□ 1.09
SLC3A2-213ENST00000539458 FER1L6Q2WGJ9 1857 aa21.82■■□□□ 1.08
SLC3A2-213ENST00000539458 UBTFL1P0CB47 393 aaPredicted RBP21.82■■□□□ 1.08
SLC3A2-213ENST00000539458 RLBP1P12271 317 aa21.82■■□□□ 1.08
SLC3A2-213ENST00000539458 ATP6V0A2Q9Y487 856 aa21.82■■□□□ 1.08
SLC3A2-213ENST00000539458 SNED1Q8TER0 1413 aa21.81■■□□□ 1.08
SLC3A2-213ENST00000539458 PLIN1O60240 522 aa21.81■■□□□ 1.08
SLC3A2-213ENST00000539458 GNAI3P08754 354 aa21.81■■□□□ 1.08
SLC3A2-213ENST00000539458 RPS8P62241 208 aaKnown RBP21.81■■□□□ 1.08
SLC3A2-213ENST00000539458 FAM161AQ3B820 660 aa21.81■■□□□ 1.08
SLC3A2-213ENST00000539458 LMBR1LQ6UX01 489 aa21.81■■□□□ 1.08
SLC3A2-213ENST00000539458 OLFM4Q6UX06 510 aa21.81■■□□□ 1.08
SLC3A2-213ENST00000539458 CDC5LQ99459 802 aaKnown RBP21.81■■□□□ 1.08
SLC3A2-213ENST00000539458 MEIS3Q99687 375 aa21.81■■□□□ 1.08
SLC3A2-213ENST00000539458 HDAC5Q9UQL6 1122 aa21.81■■□□□ 1.08
SLC3A2-213ENST00000539458 GOLGB1Q14789 3259 aaKnown RBP21.81■■□□□ 1.08
SLC3A2-213ENST00000539458 ITGA6P23229 1130 aa21.8■■□□□ 1.08
SLC3A2-213ENST00000539458 RABL6Q3YEC7 729 aaPredicted RBP21.8■■□□□ 1.08
SLC3A2-213ENST00000539458 GRIPAP1Q4V328 841 aa21.8■■□□□ 1.08
SLC3A2-213ENST00000539458 SP8Q8IXZ3 490 aa21.8■■□□□ 1.08
SLC3A2-213ENST00000539458 RTKN2Q8IZC4 609 aa21.8■■□□□ 1.08
SLC3A2-213ENST00000539458 TMX4Q9H1E5 349 aaPredicted RBP21.8■■□□□ 1.08
SLC3A2-213ENST00000539458 BICC1Q9H694 974 aaKnown RBP21.8■■□□□ 1.08
SLC3A2-213ENST00000539458 LTBP3Q9NS15 1303 aa21.8■■□□□ 1.08
SLC3A2-213ENST00000539458 NFKBIEO00221 500 aa21.79■■□□□ 1.08
SLC3A2-213ENST00000539458 ANKRD18AQ8IVF6 992 aa21.79■■□□□ 1.08
SLC3A2-213ENST00000539458 ITPRIPQ8IWB1 547 aa21.79■■□□□ 1.08
SLC3A2-213ENST00000539458 ANKRD44Q8N8A2 993 aa21.79■■□□□ 1.08
SLC3A2-213ENST00000539458 PANK1Q8TE04 598 aa21.79■■□□□ 1.08
SLC3A2-213ENST00000539458 CHMP3Q9Y3E7 222 aa21.79■■□□□ 1.08
SLC3A2-213ENST00000539458 ANKRD18BA2A2Z9 1011 aa21.78■■□□□ 1.08
SLC3A2-213ENST00000539458 IFIT5Q13325 482 aaKnown RBP21.78■■□□□ 1.08
SLC3A2-213ENST00000539458 SLC51AQ86UW1 340 aa21.78■■□□□ 1.08
SLC3A2-213ENST00000539458 RASSF7Q02833 373 aa21.77■■□□□ 1.08
SLC3A2-213ENST00000539458 TAOK3Q9H2K8 898 aa21.77■■□□□ 1.08
SLC3A2-213ENST00000539458 SPEF2Q9C093 1822 aa21.77■■□□□ 1.08
SLC3A2-213ENST00000539458 KIF3CO14782 793 aa21.76■■□□□ 1.07
SLC3A2-213ENST00000539458 IGHMBP2P38935 993 aaKnown RBP21.76■■□□□ 1.07
SLC3A2-213ENST00000539458 FKBP4Q02790 459 aaKnown RBP eCLIP21.76■■□□□ 1.07
SLC3A2-213ENST00000539458 PDE3AQ14432 1141 aa21.76■■□□□ 1.07
SLC3A2-213ENST00000539458 CCDC57Q2TAC2 916 aa21.76■■□□□ 1.07
SLC3A2-213ENST00000539458 PSMD1Q99460 953 aa21.76■■□□□ 1.07
SLC3A2-213ENST00000539458 LRRFIP2Q9Y608 721 aaKnown RBP21.76■■□□□ 1.07
SLC3A2-213ENST00000539458 CENPBP07199 599 aaPredicted RBP21.75■■□□□ 1.07
SLC3A2-213ENST00000539458 BSDC1Q9NW68 430 aaPredicted RBP21.75■■□□□ 1.07
SLC3A2-213ENST00000539458 LTBP1Q14766 1721 aa21.75■■□□□ 1.07
SLC3A2-213ENST00000539458 APLP1P51693 650 aa21.74■■□□□ 1.07
SLC3A2-213ENST00000539458 RRP1P56182 461 aaKnown RBP21.74■■□□□ 1.07
SLC3A2-213ENST00000539458 MVPQ14764 893 aaKnown RBP21.74■■□□□ 1.07
SLC3A2-213ENST00000539458 ZBTB7BO15156 539 aaPredicted RBP21.73■■□□□ 1.07
SLC3A2-213ENST00000539458 TOMM70O94826 608 aa21.73■■□□□ 1.07
SLC3A2-213ENST00000539458 GNAI2P04899 355 aa21.73■■□□□ 1.07
SLC3A2-213ENST00000539458 LMNB1P20700 586 aa21.73■■□□□ 1.07
SLC3A2-213ENST00000539458 DPP8Q6V1X1 898 aaPredicted RBP21.73■■□□□ 1.07
SLC3A2-213ENST00000539458 C16orf71Q8IYS4 520 aaPredicted RBP21.73■■□□□ 1.07
SLC3A2-213ENST00000539458 MPNDQ8N594 471 aa21.73■■□□□ 1.07
SLC3A2-213ENST00000539458 MPHOSPH8Q99549 860 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms