RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 DPEP1P16444 411 aa11.48□□□□□ -0.57
RTN4IP1-204ENST00000539449 GPTP24298 496 aa11.48□□□□□ -0.57
RTN4IP1-204ENST00000539449 RPAP2Q8IXW5 612 aaPredicted RBP11.48□□□□□ -0.57
RTN4IP1-204ENST00000539449 SMC5Q8IY18 1101 aa11.48□□□□□ -0.57
RTN4IP1-204ENST00000539449 AIDAQ96BJ3 306 aa11.48□□□□□ -0.57
RTN4IP1-204ENST00000539449 C9orf78Q9NZ63 289 aaPredicted RBP11.48□□□□□ -0.57
RTN4IP1-204ENST00000539449 PDZRN3Q9UPQ7 1066 aa11.48□□□□□ -0.57
RTN4IP1-204ENST00000539449 COL15A1P39059 1388 aa11.48□□□□□ -0.57
RTN4IP1-204ENST00000539449 PDE4DIPQ5VU43 2346 aa11.48□□□□□ -0.57
RTN4IP1-204ENST00000539449 SCN7AQ01118 1682 aa11.47□□□□□ -0.57
RTN4IP1-204ENST00000539449 IBTKQ9P2D0 1353 aaPredicted RBP11.47□□□□□ -0.57
RTN4IP1-204ENST00000539449 A0A087WZG4 1122 aa11.47□□□□□ -0.57
RTN4IP1-204ENST00000539449 ERVV-1B6SEH8 477 aa11.47□□□□□ -0.57
RTN4IP1-204ENST00000539449 H7C1W4 665 aa11.47□□□□□ -0.57
RTN4IP1-204ENST00000539449 GNPATO15228 680 aa11.47□□□□□ -0.57
RTN4IP1-204ENST00000539449 VEGFAP15692 232 aaPredicted RBP11.47□□□□□ -0.57
RTN4IP1-204ENST00000539449 SSFA2P28290 1259 aa11.47□□□□□ -0.57
RTN4IP1-204ENST00000539449 LBX1P52954 281 aa11.47□□□□□ -0.57
RTN4IP1-204ENST00000539449 RTL5Q5HYW3 569 aaPredicted RBP11.47□□□□□ -0.57
RTN4IP1-204ENST00000539449 SYNE4Q8N205 404 aa11.47□□□□□ -0.57
RTN4IP1-204ENST00000539449 BCL2L12Q9HB09 334 aa11.47□□□□□ -0.57
RTN4IP1-204ENST00000539449 SRP68Q9UHB9 627 aaKnown RBP11.47□□□□□ -0.57
RTN4IP1-204ENST00000539449 CCDC85CA6NKD9 419 aa11.46□□□□□ -0.57
RTN4IP1-204ENST00000539449 TRIM28Q13263 835 aaKnown RBP11.46□□□□□ -0.57
RTN4IP1-204ENST00000539449 UBE3BQ7Z3V4 1068 aa11.46□□□□□ -0.57
RTN4IP1-204ENST00000539449 PPP1R42Q7Z4L9 355 aa11.46□□□□□ -0.57
RTN4IP1-204ENST00000539449 NLRP10Q86W26 655 aa11.46□□□□□ -0.57
RTN4IP1-204ENST00000539449 ZNF34Q8IZ26 560 aa11.46□□□□□ -0.57
RTN4IP1-204ENST00000539449 BICC1Q9H694 974 aaKnown RBP11.46□□□□□ -0.57
RTN4IP1-204ENST00000539449 CREBZFQ9NS37 354 aa11.46□□□□□ -0.57
RTN4IP1-204ENST00000539449 CWC25Q9NXE8 425 aaPredicted RBP11.46□□□□□ -0.57
RTN4IP1-204ENST00000539449 UBN2Q6ZU65 1347 aa11.45□□□□□ -0.58
RTN4IP1-204ENST00000539449 CCDC191Q8NCU4 936 aa11.45□□□□□ -0.58
RTN4IP1-204ENST00000539449 ARHGEF1Q92888 912 aaKnown RBP11.45□□□□□ -0.58
RTN4IP1-204ENST00000539449 DCTPP1Q9H773 170 aa11.45□□□□□ -0.58
RTN4IP1-204ENST00000539449 TNRC18O15417 2968 aaPredicted RBP11.45□□□□□ -0.58
RTN4IP1-204ENST00000539449 CNTNAP1P78357 1384 aa11.44□□□□□ -0.58
RTN4IP1-204ENST00000539449 KCNA3P22001 575 aa11.44□□□□□ -0.58
RTN4IP1-204ENST00000539449 PDE4AP27815 886 aa11.44□□□□□ -0.58
RTN4IP1-204ENST00000539449 FOXO4P98177 505 aa11.44□□□□□ -0.58
RTN4IP1-204ENST00000539449 POLA2Q14181 598 aa11.44□□□□□ -0.58
RTN4IP1-204ENST00000539449 SUSD4Q5VX71 490 aa11.44□□□□□ -0.58
RTN4IP1-204ENST00000539449 USPL1Q5W0Q7 1092 aa11.44□□□□□ -0.58
RTN4IP1-204ENST00000539449 NPM2Q86SE8 214 aaKnown RBP11.44□□□□□ -0.58
RTN4IP1-204ENST00000539449 SSH3Q8TE77 659 aa11.44□□□□□ -0.58
RTN4IP1-204ENST00000539449 RTCBQ9Y3I0 505 aaKnown RBP11.44□□□□□ -0.58
RTN4IP1-204ENST00000539449 ZC3H4Q9UPT8 1303 aaKnown RBP11.43□□□□□ -0.58
RTN4IP1-204ENST00000539449 FAM177BA6PVY3 158 aa11.43□□□□□ -0.58
RTN4IP1-204ENST00000539449 MTX1Q13505 466 aa11.43□□□□□ -0.58
RTN4IP1-204ENST00000539449 HSP90AB3PQ58FF7 597 aa11.43□□□□□ -0.58
RTN4IP1-204ENST00000539449 FAM89AQ96GI7 184 aa11.43□□□□□ -0.58
RTN4IP1-204ENST00000539449 WBP1LQ9NX94 342 aa11.43□□□□□ -0.58
RTN4IP1-204ENST00000539449 PIM2Q9P1W9 311 aa11.43□□□□□ -0.58
RTN4IP1-204ENST00000539449 NARFQ9UHQ1 456 aa11.43□□□□□ -0.58
RTN4IP1-204ENST00000539449 DDX60Q8IY21 1712 aaKnown RBP11.43□□□□□ -0.58
RTN4IP1-204ENST00000539449 MYH3P11055 1940 aa11.43□□□□□ -0.58
RTN4IP1-204ENST00000539449 GLTPD2A6NH11 291 aa11.42□□□□□ -0.58
RTN4IP1-204ENST00000539449 SRGAP3O43295 1099 aa11.42□□□□□ -0.58
RTN4IP1-204ENST00000539449 SMARCA5O60264 1052 aaPredicted RBP11.42□□□□□ -0.58
RTN4IP1-204ENST00000539449 PCCAP05165 728 aaPredicted RBP11.42□□□□□ -0.58
RTN4IP1-204ENST00000539449 HSPA8P11142 646 aaKnown RBP11.42□□□□□ -0.58
RTN4IP1-204ENST00000539449 RGS3P49796 1198 aa11.42□□□□□ -0.58
RTN4IP1-204ENST00000539449 NUCB1Q02818 461 aa11.42□□□□□ -0.58
RTN4IP1-204ENST00000539449 TRAPPC3LQ5T215 181 aa11.42□□□□□ -0.58
RTN4IP1-204ENST00000539449 ANKRD45Q5TZF3 282 aa11.42□□□□□ -0.58
RTN4IP1-204ENST00000539449 TBC1D9BQ66K14 1250 aa11.42□□□□□ -0.58
RTN4IP1-204ENST00000539449 PA2G4Q9UQ80 394 aaKnown RBP11.42□□□□□ -0.58
RTN4IP1-204ENST00000539449 EXOC6BQ9Y2D4 811 aa11.42□□□□□ -0.58
RTN4IP1-204ENST00000539449 APBB1O00213 710 aa11.41□□□□□ -0.58
RTN4IP1-204ENST00000539449 RFX5P48382 616 aaPredicted RBP11.41□□□□□ -0.58
RTN4IP1-204ENST00000539449 RABL6Q3YEC7 729 aaPredicted RBP11.41□□□□□ -0.58
RTN4IP1-204ENST00000539449 DALRD3Q5D0E6 543 aaKnown RBP11.41□□□□□ -0.58
RTN4IP1-204ENST00000539449 POTEHQ6S545 545 aa11.41□□□□□ -0.58
RTN4IP1-204ENST00000539449 BICDL1Q6ZP65 573 aa11.41□□□□□ -0.58
RTN4IP1-204ENST00000539449 GCC1Q96CN9 775 aa11.41□□□□□ -0.58
RTN4IP1-204ENST00000539449 LNPKQ9C0E8 428 aa11.41□□□□□ -0.58
RTN4IP1-204ENST00000539449 NIP7Q9Y221 180 aaKnown RBP eCLIP11.41□□□□□ -0.58
RTN4IP1-204ENST00000539449 TIAM2Q8IVF5 1701 aa11.4□□□□□ -0.58
RTN4IP1-204ENST00000539449 CCDC88AQ3V6T2 1871 aa11.4□□□□□ -0.58
RTN4IP1-204ENST00000539449 USP42Q9H9J4 1324 aaKnown RBP11.4□□□□□ -0.58
RTN4IP1-204ENST00000539449 POTECB2RU33 542 aa11.4□□□□□ -0.58
RTN4IP1-204ENST00000539449 HMMRO75330 724 aa11.4□□□□□ -0.58
RTN4IP1-204ENST00000539449 VEGFBP49765 207 aa11.4□□□□□ -0.58
RTN4IP1-204ENST00000539449 LMBR1LQ6UX01 489 aa11.4□□□□□ -0.58
RTN4IP1-204ENST00000539449 CHD1LQ86WJ1 897 aa11.4□□□□□ -0.58
RTN4IP1-204ENST00000539449 ZBTB38Q8NAP3 1195 aaPredicted RBP11.4□□□□□ -0.58
RTN4IP1-204ENST00000539449 KLHDC4Q8TBB5 520 aa11.4□□□□□ -0.58
RTN4IP1-204ENST00000539449 TRMT112Q9UI30 125 aaKnown RBP11.4□□□□□ -0.58
RTN4IP1-204ENST00000539449 LAMB2P55268 1798 aa11.4□□□□□ -0.58
RTN4IP1-204ENST00000539449 CDHR2Q9BYE9 1310 aa11.39□□□□□ -0.59
RTN4IP1-204ENST00000539449 ZPR1O75312 459 aa11.39□□□□□ -0.59
RTN4IP1-204ENST00000539449 SURF6O75683 361 aaKnown RBP11.39□□□□□ -0.59
RTN4IP1-204ENST00000539449 NTSR2O95665 410 aa11.39□□□□□ -0.59
RTN4IP1-204ENST00000539449 MYCNP04198 464 aaPredicted RBP11.39□□□□□ -0.59
RTN4IP1-204ENST00000539449 TAF1P21675 1872 aa11.39□□□□□ -0.59
RTN4IP1-204ENST00000539449 RFC4P35249 363 aa11.39□□□□□ -0.59
RTN4IP1-204ENST00000539449 CLEC4GQ6UXB4 293 aa11.39□□□□□ -0.59
RTN4IP1-204ENST00000539449 NUTM1Q86Y26 1132 aa11.39□□□□□ -0.59
RTN4IP1-204ENST00000539449 NLGN1Q8N2Q7 840 aa11.39□□□□□ -0.59
RTN4IP1-204ENST00000539449 OTUD7AQ8TE49 926 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms