RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 UBE3BQ7Z3V4 1068 aa19.07■□□□□ 0.64
PRPF19-203ENST00000539180 SLC51AQ86UW1 340 aa19.07■□□□□ 0.64
PRPF19-203ENST00000539180 JARID2Q92833 1246 aaPredicted RBP19.07■□□□□ 0.64
PRPF19-203ENST00000539180 PLA2G12BQ9BX93 195 aa19.07■□□□□ 0.64
PRPF19-203ENST00000539180 PPEF1O14829 653 aaPredicted RBP19.06■□□□□ 0.64
PRPF19-203ENST00000539180 ALDH1L1O75891 902 aa19.06■□□□□ 0.64
PRPF19-203ENST00000539180 HSP90B1P14625 803 aaKnown RBP19.06■□□□□ 0.64
PRPF19-203ENST00000539180 GRAPQ13588 217 aa19.06■□□□□ 0.64
PRPF19-203ENST00000539180 CCDC93Q567U6 631 aa19.06■□□□□ 0.64
PRPF19-203ENST00000539180 OLFM4Q6UX06 510 aa19.06■□□□□ 0.64
PRPF19-203ENST00000539180 GRAPLQ8TC17 118 aaPredicted RBP19.06■□□□□ 0.64
PRPF19-203ENST00000539180 ZNF219Q9P2Y4 722 aaPredicted RBP19.06■□□□□ 0.64
PRPF19-203ENST00000539180 CTSWP56202 376 aa19.05■□□□□ 0.64
PRPF19-203ENST00000539180 SRCIN1Q9C0H9 1055 aa19.05■□□□□ 0.64
PRPF19-203ENST00000539180 SLC4A10Q6U841 1118 aa19.04■□□□□ 0.64
PRPF19-203ENST00000539180 DDX46Q7L014 1031 aaKnown RBP19.04■□□□□ 0.64
PRPF19-203ENST00000539180 NOB1Q9ULX3 412 aaKnown RBP19.04■□□□□ 0.64
PRPF19-203ENST00000539180 UTYO14607 1347 aa19.03■□□□□ 0.64
PRPF19-203ENST00000539180 GRM8O00222 908 aa19.03■□□□□ 0.64
PRPF19-203ENST00000539180 CELF1Q92879 486 aaKnown RBP19.03■□□□□ 0.64
PRPF19-203ENST00000539180 TAOK3Q9H2K8 898 aa19.03■□□□□ 0.64
PRPF19-203ENST00000539180 COL4A5P29400 1685 aa19.03■□□□□ 0.64
PRPF19-203ENST00000539180 CCDC152Q4G0S7 254 aa19.02■□□□□ 0.64
PRPF19-203ENST00000539180 CC2D2BQ6DHV5 1058 aa19.02■□□□□ 0.64
PRPF19-203ENST00000539180 ARHGAP45Q92619 1136 aa19.02■□□□□ 0.64
PRPF19-203ENST00000539180 ATP6V0A2Q9Y487 856 aa19.02■□□□□ 0.64
PRPF19-203ENST00000539180 ZC3H4Q9UPT8 1303 aaKnown RBP19.01■□□□□ 0.63
PRPF19-203ENST00000539180 BCAR3O75815 825 aa19.01■□□□□ 0.63
PRPF19-203ENST00000539180 BBOX1O75936 387 aa19.01■□□□□ 0.63
PRPF19-203ENST00000539180 LMNB1P20700 586 aa19.01■□□□□ 0.63
PRPF19-203ENST00000539180 FKBP4Q02790 459 aaKnown RBP eCLIP19.01■□□□□ 0.63
PRPF19-203ENST00000539180 C9orf131Q5VYM1 1079 aa19.01■□□□□ 0.63
PRPF19-203ENST00000539180 TMC4Q7Z404 712 aa19.01■□□□□ 0.63
PRPF19-203ENST00000539180 TTLL11Q8NHH1 800 aa19.01■□□□□ 0.63
PRPF19-203ENST00000539180 API5Q9BZZ5 524 aaKnown RBP19.01■□□□□ 0.63
PRPF19-203ENST00000539180 RTKN2Q8IZC4 609 aa19■□□□□ 0.63
PRPF19-203ENST00000539180 PSMD1Q99460 953 aa19■□□□□ 0.63
PRPF19-203ENST00000539180 SEC31BQ9NQW1 1179 aa19■□□□□ 0.63
PRPF19-203ENST00000539180 RNF181Q9P0P0 153 aa19■□□□□ 0.63
PRPF19-203ENST00000539180 CSF1RP07333 972 aa18.99■□□□□ 0.63
PRPF19-203ENST00000539180 GRIPAP1Q4V328 841 aa18.99■□□□□ 0.63
PRPF19-203ENST00000539180 SP8Q8IXZ3 490 aa18.99■□□□□ 0.63
PRPF19-203ENST00000539180 GREM2Q9H772 168 aa18.99■□□□□ 0.63
PRPF19-203ENST00000539180 NBPF7P0C2Y1 421 aaPredicted RBP18.98■□□□□ 0.63
PRPF19-203ENST00000539180 TRIM27P14373 513 aa18.98■□□□□ 0.63
PRPF19-203ENST00000539180 FOXO4P98177 505 aa18.98■□□□□ 0.63
PRPF19-203ENST00000539180 ZNF784Q8NCA9 323 aaPredicted RBP18.98■□□□□ 0.63
PRPF19-203ENST00000539180 KAZALD1Q96I82 304 aa18.98■□□□□ 0.63
PRPF19-203ENST00000539180 CCDC85AQ96PX6 553 aaPredicted RBP18.98■□□□□ 0.63
PRPF19-203ENST00000539180 CCT4P50991 539 aaKnown RBP18.97■□□□□ 0.63
PRPF19-203ENST00000539180 FAM161AQ3B820 660 aa18.97■□□□□ 0.63
PRPF19-203ENST00000539180 EPHA10Q5JZY3 1008 aa18.97■□□□□ 0.63
PRPF19-203ENST00000539180 ATF7IPQ6VMQ6 1270 aa18.97■□□□□ 0.63
PRPF19-203ENST00000539180 C9orf78Q9NZ63 289 aaPredicted RBP18.97■□□□□ 0.63
PRPF19-203ENST00000539180 TNNQ9UQP3 1299 aa18.97■□□□□ 0.63
PRPF19-203ENST00000539180 SUCLG2Q96I99 432 aa18.96■□□□□ 0.63
PRPF19-203ENST00000539180 RTFDC1Q9BY42 306 aaPredicted RBP18.96■□□□□ 0.63
PRPF19-203ENST00000539180 USP44Q9H0E7 712 aa18.96■□□□□ 0.63
PRPF19-203ENST00000539180 WDR90Q96KV7 1748 aa18.96■□□□□ 0.63
PRPF19-203ENST00000539180 RPS8P62241 208 aaKnown RBP18.95■□□□□ 0.62
PRPF19-203ENST00000539180 INTS3Q68E01 1043 aaKnown RBP18.95■□□□□ 0.62
PRPF19-203ENST00000539180 CDC5LQ99459 802 aaKnown RBP18.95■□□□□ 0.62
PRPF19-203ENST00000539180 IPO8O15397 1037 aaKnown RBP18.94■□□□□ 0.62
PRPF19-203ENST00000539180 ITGA6P23229 1130 aa18.94■□□□□ 0.62
PRPF19-203ENST00000539180 IARSP41252 1262 aaKnown RBP18.94■□□□□ 0.62
PRPF19-203ENST00000539180 RABL6Q3YEC7 729 aaPredicted RBP18.94■□□□□ 0.62
PRPF19-203ENST00000539180 ZNF277Q9NRM2 450 aaPredicted RBP18.94■□□□□ 0.62
PRPF19-203ENST00000539180 ZKSCAN2Q63HK3 967 aa18.93■□□□□ 0.62
PRPF19-203ENST00000539180 ANKRD18AQ8IVF6 992 aa18.93■□□□□ 0.62
PRPF19-203ENST00000539180 FRAT1Q92837 279 aaPredicted RBP18.93■□□□□ 0.62
PRPF19-203ENST00000539180 ZNF646O15015 1829 aaPredicted RBP18.93■□□□□ 0.62
PRPF19-203ENST00000539180 PSME4Q14997 1843 aa18.93■□□□□ 0.62
PRPF19-203ENST00000539180 LMBR1LQ6UX01 489 aa18.92■□□□□ 0.62
PRPF19-203ENST00000539180 MPNDQ8N594 471 aa18.92■□□□□ 0.62
PRPF19-203ENST00000539180 ANKRD44Q8N8A2 993 aa18.92■□□□□ 0.62
PRPF19-203ENST00000539180 GPSM2P81274 684 aa18.91■□□□□ 0.62
PRPF19-203ENST00000539180 DPP8Q6V1X1 898 aaPredicted RBP18.91■□□□□ 0.62
PRPF19-203ENST00000539180 TMX4Q9H1E5 349 aaPredicted RBP18.91■□□□□ 0.62
PRPF19-203ENST00000539180 BICC1Q9H694 974 aaKnown RBP18.91■□□□□ 0.62
PRPF19-203ENST00000539180 BSDC1Q9NW68 430 aaPredicted RBP18.91■□□□□ 0.62
PRPF19-203ENST00000539180 PODXL2Q9NZ53 605 aa18.91■□□□□ 0.62
PRPF19-203ENST00000539180 SUPT20HQ8NEM7 779 aa18.9■□□□□ 0.62
PRPF19-203ENST00000539180 VPS33BQ9H267 617 aa18.9■□□□□ 0.62
PRPF19-203ENST00000539180 ANKRD18BA2A2Z9 1011 aa18.89■□□□□ 0.61
PRPF19-203ENST00000539180 KIAA2012Q0VF49 1180 aa18.89■□□□□ 0.61
PRPF19-203ENST00000539180 MEIS3Q99687 375 aa18.89■□□□□ 0.61
PRPF19-203ENST00000539180 IGHMBP2P38935 993 aaKnown RBP18.88■□□□□ 0.61
PRPF19-203ENST00000539180 IFIT5Q13325 482 aaKnown RBP18.88■□□□□ 0.61
PRPF19-203ENST00000539180 AOC3Q16853 763 aa18.88■□□□□ 0.61
PRPF19-203ENST00000539180 TMEM57Q8N5G2 664 aa18.88■□□□□ 0.61
PRPF19-203ENST00000539180 CLUAP1Q96AJ1 413 aa18.88■□□□□ 0.61
PRPF19-203ENST00000539180 RCAN3Q9UKA8 241 aa18.88■□□□□ 0.61
PRPF19-203ENST00000539180 XDHP47989 1333 aa18.88■□□□□ 0.61
PRPF19-203ENST00000539180 SCN4AP35499 1836 aa18.88■□□□□ 0.61
PRPF19-203ENST00000539180 SCN9AQ15858 1988 aa18.88■□□□□ 0.61
PRPF19-203ENST00000539180 FZD9O00144 591 aa18.87■□□□□ 0.61
PRPF19-203ENST00000539180 PPIP5K2O43314 1243 aa18.87■□□□□ 0.61
PRPF19-203ENST00000539180 UBTFL1P0CB47 393 aaPredicted RBP18.87■□□□□ 0.61
PRPF19-203ENST00000539180 RLBP1P12271 317 aa18.87■□□□□ 0.61
PRPF19-203ENST00000539180 TBC1D16Q8TBP0 767 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms