RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 DDIT3P35638 169 aa24.71■■□□□ 1.55
DDX55-205ENST00000538744 LRRC24Q50LG9 513 aa24.71■■□□□ 1.55
DDX55-205ENST00000538744 TRMT112Q9UI30 125 aaKnown RBP24.71■■□□□ 1.55
DDX55-205ENST00000538744 FSD1Q9BTV5 496 aa24.7■■□□□ 1.54
DDX55-205ENST00000538744 PALD1Q9ULE6 856 aa24.7■■□□□ 1.54
DDX55-205ENST00000538744 NHSQ6T4R5 1651 aa24.7■■□□□ 1.54
DDX55-205ENST00000538744 IFIT5Q13325 482 aaKnown RBP24.69■■□□□ 1.54
DDX55-205ENST00000538744 MEX3CQ5U5Q3 659 aaKnown RBP24.69■■□□□ 1.54
DDX55-205ENST00000538744 CIZ1Q9ULV3 898 aaPredicted RBP24.69■■□□□ 1.54
DDX55-205ENST00000538744 BCORQ6W2J9 1755 aa24.69■■□□□ 1.54
DDX55-205ENST00000538744 UBN2Q6ZU65 1347 aa24.69■■□□□ 1.54
DDX55-205ENST00000538744 IRS4O14654 1257 aaPredicted RBP24.69■■□□□ 1.54
DDX55-205ENST00000538744 FRAT2O75474 233 aaPredicted RBP24.69■■□□□ 1.54
DDX55-205ENST00000538744 TAF7LQ5H9L4 462 aa24.69■■□□□ 1.54
DDX55-205ENST00000538744 CTSWP56202 376 aa24.68■■□□□ 1.54
DDX55-205ENST00000538744 SYNE4Q8N205 404 aa24.68■■□□□ 1.54
DDX55-205ENST00000538744 IL27Q8NEV9 243 aa24.68■■□□□ 1.54
DDX55-205ENST00000538744 BTAF1O14981 1849 aa24.68■■□□□ 1.54
DDX55-205ENST00000538744 RFX7Q2KHR2 1363 aa24.67■■□□□ 1.54
DDX55-205ENST00000538744 NEUROD6Q96NK8 337 aa24.67■■□□□ 1.54
DDX55-205ENST00000538744 PUS3Q9BZE2 481 aaKnown RBP24.67■■□□□ 1.54
DDX55-205ENST00000538744 CEP126Q9P2H0 1117 aa24.67■■□□□ 1.54
DDX55-205ENST00000538744 CAMTA2O94983 1202 aa24.66■■□□□ 1.54
DDX55-205ENST00000538744 NEK4P51957 841 aa24.66■■□□□ 1.54
DDX55-205ENST00000538744 NMIQ13287 307 aaPredicted RBP24.66■■□□□ 1.54
DDX55-205ENST00000538744 TTLL11Q8NHH1 800 aa24.66■■□□□ 1.54
DDX55-205ENST00000538744 HAUS7Q99871 368 aa24.66■■□□□ 1.54
DDX55-205ENST00000538744 PDE8AO60658 829 aa24.66■■□□□ 1.54
DDX55-205ENST00000538744 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
DDX55-205ENST00000538744 CCDC85AQ96PX6 553 aaPredicted RBP24.66■■□□□ 1.54
DDX55-205ENST00000538744 HSPA1LP34931 641 aa24.65■■□□□ 1.54
DDX55-205ENST00000538744 MCM2P49736 904 aa24.65■■□□□ 1.54
DDX55-205ENST00000538744 AK7Q96M32 723 aa24.65■■□□□ 1.54
DDX55-205ENST00000538744 SNRKQ9NRH2 765 aa24.65■■□□□ 1.54
DDX55-205ENST00000538744 AKAP2Q9Y2D5 859 aa24.65■■□□□ 1.54
DDX55-205ENST00000538744 SPEF2Q9C093 1822 aa24.64■■□□□ 1.53
DDX55-205ENST00000538744 A0A1B0GUL7 405 aa24.64■■□□□ 1.53
DDX55-205ENST00000538744 ANKRD18BA2A2Z9 1011 aa24.64■■□□□ 1.53
DDX55-205ENST00000538744 ITGA6P23229 1130 aa24.64■■□□□ 1.53
DDX55-205ENST00000538744 TIMM10P62072 90 aa24.64■■□□□ 1.53
DDX55-205ENST00000538744 PARP10Q53GL7 1025 aa24.64■■□□□ 1.53
DDX55-205ENST00000538744 FAM227BQ96M60 508 aa24.64■■□□□ 1.53
DDX55-205ENST00000538744 GREM2Q9H772 168 aa24.64■■□□□ 1.53
DDX55-205ENST00000538744 LAMB2P55268 1798 aa24.63■■□□□ 1.53
DDX55-205ENST00000538744 DNAJC2Q99543 621 aaKnown RBP24.63■■□□□ 1.53
DDX55-205ENST00000538744 FOXD4L1Q9NU39 408 aa24.63■■□□□ 1.53
DDX55-205ENST00000538744 AFF2P51816 1311 aa24.62■■□□□ 1.53
DDX55-205ENST00000538744 CCDC171Q6TFL3 1326 aa24.62■■□□□ 1.53
DDX55-205ENST00000538744 LINC00116Q8NCU8 138 aa24.62■■□□□ 1.53
DDX55-205ENST00000538744 EDC3Q96F86 508 aaKnown RBP24.62■■□□□ 1.53
DDX55-205ENST00000538744 GJD4Q96KN9 370 aaPredicted RBP24.62■■□□□ 1.53
DDX55-205ENST00000538744 SH3TC1Q8TE82 1336 aa24.62■■□□□ 1.53
DDX55-205ENST00000538744 A0A0D9SFI3 127 aa24.61■■□□□ 1.53
DDX55-205ENST00000538744 PTH1RQ03431 593 aa24.61■■□□□ 1.53
DDX55-205ENST00000538744 SUSD4Q5VX71 490 aa24.61■■□□□ 1.53
DDX55-205ENST00000538744 UTP14AQ9BVJ6 771 aaKnown RBP24.61■■□□□ 1.53
DDX55-205ENST00000538744 ZNF652Q9Y2D9 606 aa24.61■■□□□ 1.53
DDX55-205ENST00000538744 SNX14Q9Y5W7 946 aa24.61■■□□□ 1.53
DDX55-205ENST00000538744 DDX60Q8IY21 1712 aaKnown RBP24.61■■□□□ 1.53
DDX55-205ENST00000538744 CNTNAP4Q9C0A0 1308 aa24.61■■□□□ 1.53
DDX55-205ENST00000538744 RIC1Q4ADV7 1423 aa24.61■■□□□ 1.53
DDX55-205ENST00000538744 MED23Q9ULK4 1368 aa24.61■■□□□ 1.53
DDX55-205ENST00000538744 ATRNO75882 1429 aa24.6■■□□□ 1.53
DDX55-205ENST00000538744 LRP5O75197 1615 aa24.6■■□□□ 1.53
DDX55-205ENST00000538744 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.6■■□□□ 1.53
DDX55-205ENST00000538744 SBF2Q86WG5 1849 aa24.6■■□□□ 1.53
DDX55-205ENST00000538744 LDHAL6AQ6ZMR3 332 aa24.59■■□□□ 1.53
DDX55-205ENST00000538744 TICAM2Q86XR7 235 aa24.59■■□□□ 1.53
DDX55-205ENST00000538744 RIPOR2Q9Y4F9 1068 aa24.59■■□□□ 1.53
DDX55-205ENST00000538744 SCN7AQ01118 1682 aa24.59■■□□□ 1.53
DDX55-205ENST00000538744 HSP90B1P14625 803 aaKnown RBP24.58■■□□□ 1.53
DDX55-205ENST00000538744 KBTBD3Q8NAB2 608 aa24.58■■□□□ 1.53
DDX55-205ENST00000538744 NIP7Q9Y221 180 aaKnown RBP eCLIP24.58■■□□□ 1.53
DDX55-205ENST00000538744 PAG1Q9NWQ8 432 aa24.58■■□□□ 1.52
DDX55-205ENST00000538744 NDUFB9Q9Y6M9 179 aa24.58■■□□□ 1.52
DDX55-205ENST00000538744 IFIT1P09914 478 aaKnown RBP24.57■■□□□ 1.52
DDX55-205ENST00000538744 METTL24Q5JXM2 366 aa24.57■■□□□ 1.52
DDX55-205ENST00000538744 CLEC4GQ6UXB4 293 aa24.57■■□□□ 1.52
DDX55-205ENST00000538744 PTF1AQ7RTS3 328 aa24.57■■□□□ 1.52
DDX55-205ENST00000538744 RASEFQ8IZ41 740 aa24.57■■□□□ 1.52
DDX55-205ENST00000538744 MAP4K1Q92918 833 aa24.57■■□□□ 1.52
DDX55-205ENST00000538744 KCNB2Q92953 911 aa24.57■■□□□ 1.52
DDX55-205ENST00000538744 UPF3BQ9BZI7 483 aaKnown RBP24.57■■□□□ 1.52
DDX55-205ENST00000538744 CNNM1Q9NRU3 951 aa24.57■■□□□ 1.52
DDX55-205ENST00000538744 LY75O60449 1722 aa24.57■■□□□ 1.52
DDX55-205ENST00000538744 CCDC158Q5M9N0 1113 aa24.56■■□□□ 1.52
DDX55-205ENST00000538744 GORABQ5T7V8 394 aa24.56■■□□□ 1.52
DDX55-205ENST00000538744 DDX46Q7L014 1031 aaKnown RBP24.56■■□□□ 1.52
DDX55-205ENST00000538744 CWC22Q9HCG8 908 aaKnown RBP24.56■■□□□ 1.52
DDX55-205ENST00000538744 TRPC5Q9UL62 973 aaPredicted RBP24.56■■□□□ 1.52
DDX55-205ENST00000538744 RGL2O15211 777 aa24.55■■□□□ 1.52
DDX55-205ENST00000538744 NTSR2O95665 410 aa24.55■■□□□ 1.52
DDX55-205ENST00000538744 KCNJ4P48050 445 aa24.55■■□□□ 1.52
DDX55-205ENST00000538744 RAB3GAP1Q15042 981 aa24.55■■□□□ 1.52
DDX55-205ENST00000538744 NECTIN1Q15223 517 aa24.55■■□□□ 1.52
DDX55-205ENST00000538744 RC3H1Q5TC82 1133 aaKnown RBP24.55■■□□□ 1.52
DDX55-205ENST00000538744 XAGE2Q96GT9 111 aa24.55■■□□□ 1.52
DDX55-205ENST00000538744 RBM8AQ9Y5S9 174 aaKnown RBP24.55■■□□□ 1.52
DDX55-205ENST00000538744 FAM177BA6PVY3 158 aa24.55■■□□□ 1.52
DDX55-205ENST00000538744 GOLIM4O00461 696 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms