RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 IDH3AP50213 366 aa12.59□□□□□ -0.39
CD9-207ENST00000538418 SERINC3Q13530 473 aa12.59□□□□□ -0.39
CD9-207ENST00000538418 Q6ZVU0 165 aa12.59□□□□□ -0.39
CD9-207ENST00000538418 SUSD3Q96L08 255 aa12.59□□□□□ -0.39
CD9-207ENST00000538418 RSF1Q96T23 1441 aaPredicted RBP12.59□□□□□ -0.39
CD9-207ENST00000538418 KCNC4Q03721 635 aa12.58□□□□□ -0.4
CD9-207ENST00000538418 MKL1Q969V6 931 aa12.58□□□□□ -0.4
CD9-207ENST00000538418 NOC4LQ9BVI4 516 aaKnown RBP12.58□□□□□ -0.4
CD9-207ENST00000538418 FANCD2Q9BXW9 1451 aa12.58□□□□□ -0.4
CD9-207ENST00000538418 WIZO95785 1651 aa12.57□□□□□ -0.4
CD9-207ENST00000538418 POTECB2RU33 542 aa12.57□□□□□ -0.4
CD9-207ENST00000538418 PLA2G4AP47712 749 aa12.57□□□□□ -0.4
CD9-207ENST00000538418 LHX8Q68G74 356 aa12.57□□□□□ -0.4
CD9-207ENST00000538418 KIAA0825Q8IV33 1275 aa12.57□□□□□ -0.4
CD9-207ENST00000538418 RSRP1Q9BUV0 290 aa12.57□□□□□ -0.4
CD9-207ENST00000538418 GADD45BO75293 160 aaPredicted RBP12.56□□□□□ -0.4
CD9-207ENST00000538418 ARSDP51689 593 aa12.56□□□□□ -0.4
CD9-207ENST00000538418 IGBP1P78318 339 aa12.56□□□□□ -0.4
CD9-207ENST00000538418 TRIP4Q15650 581 aaPredicted RBP12.56□□□□□ -0.4
CD9-207ENST00000538418 GNASQ5JWF2 1037 aa12.56□□□□□ -0.4
CD9-207ENST00000538418 NBPF10Q6P3W6 841 aaKnown RBP12.56□□□□□ -0.4
CD9-207ENST00000538418 KCNB2Q92953 911 aa12.56□□□□□ -0.4
CD9-207ENST00000538418 MRGPRX2Q96LB1 330 aa12.56□□□□□ -0.4
CD9-207ENST00000538418 AGBL1Q96MI9 1066 aa12.56□□□□□ -0.4
CD9-207ENST00000538418 ZNF408Q9H9D4 720 aa12.56□□□□□ -0.4
CD9-207ENST00000538418 ELP3Q9H9T3 547 aa12.56□□□□□ -0.4
CD9-207ENST00000538418 USP20Q9Y2K6 914 aa12.56□□□□□ -0.4
CD9-207ENST00000538418 hCG_2014768A0A024R1R8 64 aa12.55□□□□□ -0.4
CD9-207ENST00000538418 UBAP1LF5GYI3 381 aa12.55□□□□□ -0.4
CD9-207ENST00000538418 WNT7AO00755 349 aa12.55□□□□□ -0.4
CD9-207ENST00000538418 RAB11FIP3O75154 756 aa12.55□□□□□ -0.4
CD9-207ENST00000538418 POLR3DP05423 398 aaPredicted RBP12.55□□□□□ -0.4
CD9-207ENST00000538418 NFX1Q12986 1120 aaKnown RBP12.55□□□□□ -0.4
CD9-207ENST00000538418 NNTQ13423 1086 aa12.55□□□□□ -0.4
CD9-207ENST00000538418 NBPF1Q3BBV0 1214 aa12.55□□□□□ -0.4
CD9-207ENST00000538418 GALNT12Q8IXK2 581 aa12.55□□□□□ -0.4
CD9-207ENST00000538418 CMTR1Q8N1G2 835 aaKnown RBP12.55□□□□□ -0.4
CD9-207ENST00000538418 ZNF280CQ8ND82 737 aa12.55□□□□□ -0.4
CD9-207ENST00000538418 KRTAP3-3Q9BYR6 98 aa12.55□□□□□ -0.4
CD9-207ENST00000538418 KRTAP3-2Q9BYR7 98 aa12.55□□□□□ -0.4
CD9-207ENST00000538418 ZDHHC3Q9NYG2 299 aa12.55□□□□□ -0.4
CD9-207ENST00000538418 TMEM63CQ9P1W3 806 aa12.55□□□□□ -0.4
CD9-207ENST00000538418 MARCH6O60337 910 aa12.54□□□□□ -0.4
CD9-207ENST00000538418 INPP5BP32019 993 aa12.54□□□□□ -0.4
CD9-207ENST00000538418 PWP1Q13610 501 aa12.54□□□□□ -0.4
CD9-207ENST00000538418 AIDAQ96BJ3 306 aa12.54□□□□□ -0.4
CD9-207ENST00000538418 SUV39H2Q9H5I1 410 aa12.54□□□□□ -0.4
CD9-207ENST00000538418 TTF2Q9UNY4 1162 aaKnown RBP12.54□□□□□ -0.4
CD9-207ENST00000538418 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
CD9-207ENST00000538418 GPC6Q9Y625 555 aaPredicted RBP12.54□□□□□ -0.4
CD9-207ENST00000538418 KCNMB2Q9Y691 235 aa12.54□□□□□ -0.4
CD9-207ENST00000538418 IBSPP21815 317 aaPredicted RBP12.53□□□□□ -0.4
CD9-207ENST00000538418 GSTT1P30711 240 aa12.53□□□□□ -0.4
CD9-207ENST00000538418 NASPP49321 788 aaPredicted RBP12.53□□□□□ -0.4
CD9-207ENST00000538418 RELBQ01201 579 aa12.53□□□□□ -0.4
CD9-207ENST00000538418 C4orf17Q53FE4 359 aa12.53□□□□□ -0.4
CD9-207ENST00000538418 LCE2DQ5TA82 110 aaPredicted RBP12.53□□□□□ -0.4
CD9-207ENST00000538418 KLRG1Q96E93 195 aa12.53□□□□□ -0.4
CD9-207ENST00000538418 GRIP2Q9C0E4 1043 aa12.53□□□□□ -0.4
CD9-207ENST00000538418 ZNF395Q9H8N7 513 aaPredicted RBP12.53□□□□□ -0.4
CD9-207ENST00000538418 ADAMTS1Q9UHI8 967 aa12.53□□□□□ -0.4
CD9-207ENST00000538418 GRM2Q14416 872 aa12.52□□□□□ -0.41
CD9-207ENST00000538418 RNF187Q5TA31 235 aaPredicted RBP12.52□□□□□ -0.41
CD9-207ENST00000538418 LIAT1Q6ZQX7 453 aa12.52□□□□□ -0.41
CD9-207ENST00000538418 RELL1Q8IUW5 271 aa12.52□□□□□ -0.41
CD9-207ENST00000538418 MICAL1Q8TDZ2 1067 aa12.52□□□□□ -0.41
CD9-207ENST00000538418 HSH2DQ96JZ2 352 aa12.52□□□□□ -0.41
CD9-207ENST00000538418 POLR3GLQ9BT43 218 aa12.52□□□□□ -0.41
CD9-207ENST00000538418 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.52□□□□□ -0.41
CD9-207ENST00000538418 SIRPGQ9P1W8 387 aa12.52□□□□□ -0.41
CD9-207ENST00000538418 ANKIB1Q9P2G1 1089 aa12.52□□□□□ -0.41
CD9-207ENST00000538418 ENPP3O14638 875 aa12.51□□□□□ -0.41
CD9-207ENST00000538418 SLC27A3Q5K4L6 730 aa12.51□□□□□ -0.41
CD9-207ENST00000538418 ITPKCQ96DU7 683 aa12.51□□□□□ -0.41
CD9-207ENST00000538418 BRINP2Q9C0B6 783 aa12.51□□□□□ -0.41
CD9-207ENST00000538418 CHRDQ9H2X0 955 aa12.51□□□□□ -0.41
CD9-207ENST00000538418 TOP2AP11388 1531 aaKnown RBP12.51□□□□□ -0.41
CD9-207ENST00000538418 ITGBL1O95965 494 aaPredicted RBP12.5□□□□□ -0.41
CD9-207ENST00000538418 GPC1P35052 558 aa12.5□□□□□ -0.41
CD9-207ENST00000538418 ANKS3Q6ZW76 656 aa12.5□□□□□ -0.41
CD9-207ENST00000538418 SRPK1Q96SB4 655 aaKnown RBP12.5□□□□□ -0.41
CD9-207ENST00000538418 STRIP2Q9ULQ0 834 aa12.5□□□□□ -0.41
CD9-207ENST00000538418 EFR3BQ9Y2G0 817 aa12.5□□□□□ -0.41
CD9-207ENST00000538418 EREGO14944 169 aa12.49□□□□□ -0.41
CD9-207ENST00000538418 ALDH1A1P00352 501 aa12.49□□□□□ -0.41
CD9-207ENST00000538418 TATP17735 454 aaPredicted RBP12.49□□□□□ -0.41
CD9-207ENST00000538418 ETFBP38117 255 aa12.49□□□□□ -0.41
CD9-207ENST00000538418 BTLAQ7Z6A9 289 aa12.49□□□□□ -0.41
CD9-207ENST00000538418 ZCRB1Q8TBF4 217 aaKnown RBP12.49□□□□□ -0.41
CD9-207ENST00000538418 PPP4R2Q9NY27 417 aa12.49□□□□□ -0.41
CD9-207ENST00000538418 WASF2Q9Y6W5 498 aa12.49□□□□□ -0.41
CD9-207ENST00000538418 MINDY4BA8MYZ0 360 aa12.48□□□□□ -0.41
CD9-207ENST00000538418 ZIC2O95409 532 aaPredicted RBP12.48□□□□□ -0.41
CD9-207ENST00000538418 EIF4A3P38919 411 aaKnown RBP12.48□□□□□ -0.41
CD9-207ENST00000538418 CCDC85BQ15834 202 aaPredicted RBP12.48□□□□□ -0.41
CD9-207ENST00000538418 NOL8Q76FK4 1167 aaKnown RBP12.48□□□□□ -0.41
CD9-207ENST00000538418 C1orf127Q8N9H9 656 aa12.48□□□□□ -0.41
CD9-207ENST00000538418 EAF1Q96JC9 268 aaPredicted RBP12.48□□□□□ -0.41
CD9-207ENST00000538418 TRIM55Q9BYV6 548 aa12.48□□□□□ -0.41
CD9-207ENST00000538418 GINM1Q9NU53 330 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms