RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-208	ENST00000537983	SMCP	P49901	116 aa	Predicted RBP	7.44	□□□□□ -1.22
NPIPB3-208	ENST00000537983	PUS7	Q96PZ0	661 aa	Known RBP	7.44	□□□□□ -1.22
NPIPB3-208	ENST00000537983	RAB6B	Q9NRW1	208 aa		7.44	□□□□□ -1.22
NPIPB3-208	ENST00000537983	DIP2A	Q14689	1571 aa		7.44	□□□□□ -1.22
NPIPB3-208	ENST00000537983	ZNF142	P52746	1687 aa	Predicted RBP	7.44	□□□□□ -1.22
NPIPB3-208	ENST00000537983	ADAMTSL3	P82987	1691 aa		7.44	□□□□□ -1.22
NPIPB3-208	ENST00000537983	RIMS1	Q86UR5	1692 aa	Known RBP	7.44	□□□□□ -1.22
NPIPB3-208	ENST00000537983	TMEM2	Q9UHN6	1383 aa		7.44	□□□□□ -1.22
NPIPB3-208	ENST00000537983	NINL	Q9Y2I6	1382 aa		7.44	□□□□□ -1.22
NPIPB3-208	ENST00000537983	ARHGAP23	Q9P227	1491 aa		7.43	□□□□□ -1.22
NPIPB3-208	ENST00000537983	EPHA4	P54764	986 aa		7.43	□□□□□ -1.22
NPIPB3-208	ENST00000537983	CLN3	Q13286	438 aa		7.43	□□□□□ -1.22
NPIPB3-208	ENST00000537983	LAPTM4A	Q15012	233 aa		7.43	□□□□□ -1.22
NPIPB3-208	ENST00000537983	SWI5	Q1ZZU3	235 aa		7.43	□□□□□ -1.22
NPIPB3-208	ENST00000537983	ESCO1	Q5FWF5	840 aa		7.43	□□□□□ -1.22
NPIPB3-208	ENST00000537983	CRIPAK	Q8N1N5	446 aa		7.43	□□□□□ -1.22
NPIPB3-208	ENST00000537983	XAGE2	Q96GT9	111 aa		7.43	□□□□□ -1.22
NPIPB3-208	ENST00000537983	SLC4A9	Q96Q91	983 aa		7.43	□□□□□ -1.22
NPIPB3-208	ENST00000537983	MRS2	Q9HD23	443 aa		7.43	□□□□□ -1.22
NPIPB3-208	ENST00000537983	LRPPRC	P42704	1394 aa	Known RBP	7.43	□□□□□ -1.22
NPIPB3-208	ENST00000537983	TECPR2	O15040	1411 aa		7.43	□□□□□ -1.22
NPIPB3-208	ENST00000537983	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	7.42	□□□□□ -1.22
NPIPB3-208	ENST00000537983		A0A1W2PRU2	124 aa		7.42	□□□□□ -1.22
NPIPB3-208	ENST00000537983	RELB	Q01201	579 aa		7.42	□□□□□ -1.22
NPIPB3-208	ENST00000537983	PDE4C	Q08493	712 aa		7.42	□□□□□ -1.22
NPIPB3-208	ENST00000537983	CTC1	Q2NKJ3	1217 aa		7.42	□□□□□ -1.22
NPIPB3-208	ENST00000537983	TSEN2	Q8NCE0	465 aa	Known RBP	7.42	□□□□□ -1.22
NPIPB3-208	ENST00000537983	CLP1	Q92989	425 aa	Known RBP	7.42	□□□□□ -1.22
NPIPB3-208	ENST00000537983	PANK3	Q9H999	370 aa		7.42	□□□□□ -1.22
NPIPB3-208	ENST00000537983	TRAK1	Q9UPV9	953 aa		7.42	□□□□□ -1.22
NPIPB3-208	ENST00000537983	RBM19	Q9Y4C8	960 aa	Known RBP	7.42	□□□□□ -1.22
NPIPB3-208	ENST00000537983	EVC2	Q86UK5	1308 aa		7.42	□□□□□ -1.22
NPIPB3-208	ENST00000537983	PLEKHG1	Q9ULL1	1385 aa		7.42	□□□□□ -1.22
NPIPB3-208	ENST00000537983	SPINT1	O43278	529 aa		7.41	□□□□□ -1.22
NPIPB3-208	ENST00000537983	PKDCC	Q504Y2	493 aa		7.41	□□□□□ -1.22
NPIPB3-208	ENST00000537983	TMEM132E	Q6IEE7	984 aa		7.41	□□□□□ -1.22
NPIPB3-208	ENST00000537983	NLRP13	Q86W25	1043 aa		7.41	□□□□□ -1.22
NPIPB3-208	ENST00000537983	LINC00528	Q8N1L1	170 aa		7.41	□□□□□ -1.22
NPIPB3-208	ENST00000537983	ESYT1	Q9BSJ8	1104 aa		7.41	□□□□□ -1.22
NPIPB3-208	ENST00000537983	TSEN34	Q9BSV6	310 aa	Known RBP	7.41	□□□□□ -1.22
NPIPB3-208	ENST00000537983	INSR	P06213	1382 aa		7.41	□□□□□ -1.22
NPIPB3-208	ENST00000537983	ATAD2	Q6PL18	1390 aa		7.41	□□□□□ -1.22
NPIPB3-208	ENST00000537983	ABCC11	Q96J66	1382 aa		7.41	□□□□□ -1.22
NPIPB3-208	ENST00000537983	FAM135B	Q49AJ0	1406 aa		7.41	□□□□□ -1.22
NPIPB3-208	ENST00000537983	BACH1	O14867	736 aa		7.4	□□□□□ -1.22
NPIPB3-208	ENST00000537983	PDIA4	P13667	645 aa	Known RBP	7.4	□□□□□ -1.22
NPIPB3-208	ENST00000537983	MTFR1	Q15390	333 aa		7.4	□□□□□ -1.22
NPIPB3-208	ENST00000537983	TRIM46	Q7Z4K8	759 aa		7.4	□□□□□ -1.22
NPIPB3-208	ENST00000537983	CNKSR1	Q969H4	720 aa		7.4	□□□□□ -1.22
NPIPB3-208	ENST00000537983	FHDC1	Q9C0D6	1143 aa	Predicted RBP	7.4	□□□□□ -1.22
NPIPB3-208	ENST00000537983	ZNF395	Q9H8N7	513 aa	Predicted RBP	7.4	□□□□□ -1.22
NPIPB3-208	ENST00000537983	SERTAD1	Q9UHV2	236 aa		7.4	□□□□□ -1.22
NPIPB3-208	ENST00000537983	KNSTRN	Q9Y448	316 aa		7.4	□□□□□ -1.22
NPIPB3-208	ENST00000537983	ADGRB2	O60241	1585 aa		7.4	□□□□□ -1.22
NPIPB3-208	ENST00000537983	MED14	O60244	1454 aa		7.39	□□□□□ -1.23
NPIPB3-208	ENST00000537983	ADAMTS13	Q76LX8	1427 aa		7.39	□□□□□ -1.23
NPIPB3-208	ENST00000537983	ANKRD36B	Q8N2N9	1353 aa		7.39	□□□□□ -1.23
NPIPB3-208	ENST00000537983	FOXK2	Q01167	660 aa		7.39	□□□□□ -1.23
NPIPB3-208	ENST00000537983	OCLN	Q16625	522 aa		7.39	□□□□□ -1.23
NPIPB3-208	ENST00000537983	MRPL14	Q6P1L8	145 aa	Known RBP	7.39	□□□□□ -1.23
NPIPB3-208	ENST00000537983	IRX2	Q9BZI1	471 aa	Predicted RBP	7.39	□□□□□ -1.23
NPIPB3-208	ENST00000537983	NSD3	Q9BZ95	1437 aa		7.38	□□□□□ -1.23
NPIPB3-208	ENST00000537983	NSD2	O96028	1365 aa		7.38	□□□□□ -1.23
NPIPB3-208	ENST00000537983	ZBED9	Q6R2W3	1325 aa		7.38	□□□□□ -1.23
NPIPB3-208	ENST00000537983		A6NJY4	79 aa		7.38	□□□□□ -1.23
NPIPB3-208	ENST00000537983	BMP1	P13497	986 aa		7.38	□□□□□ -1.23
NPIPB3-208	ENST00000537983	SMTN	P53814	917 aa		7.38	□□□□□ -1.23
NPIPB3-208	ENST00000537983	TLR1	Q15399	786 aa		7.38	□□□□□ -1.23
NPIPB3-208	ENST00000537983	CCDC184	Q52MB2	194 aa		7.38	□□□□□ -1.23
NPIPB3-208	ENST00000537983	TNS4	Q8IZW8	715 aa		7.38	□□□□□ -1.23
NPIPB3-208	ENST00000537983	SCHIP1	Q9P0W5	487 aa	Predicted RBP	7.38	□□□□□ -1.23
NPIPB3-208	ENST00000537983	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	7.38	□□□□□ -1.23
NPIPB3-208	ENST00000537983	USP3	Q9Y6I4	520 aa		7.38	□□□□□ -1.23
NPIPB3-208	ENST00000537983	ATP7B	P35670	1465 aa		7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	PTCH1	Q13635	1447 aa		7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	MEN1	O00255	615 aa		7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	AXIN1	O15169	862 aa		7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	LGR5	O75473	907 aa		7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	SSFA2	P28290	1259 aa		7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	WEE1	P30291	646 aa		7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	HNRNPU	Q00839	825 aa	Known RBP eCLIP	7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	CENPC	Q03188	943 aa		7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	PHLDB3	Q6NSJ2	640 aa		7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	ZNF295-AS1	Q8N0V1	137 aa		7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	TMC1	Q8TDI8	760 aa		7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	PRAM1	Q96QH2	718 aa		7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	INSM2	Q96T92	566 aa	Predicted RBP	7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	AAAS	Q9NRG9	546 aa		7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	EID1	Q9Y6B2	187 aa		7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	XRN1	Q8IZH2	1706 aa	Known RBP	7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	ANKRD26	Q9UPS8	1709 aa		7.37	□□□□□ -1.23
NPIPB3-208	ENST00000537983	MET	P08581	1390 aa		7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	ST8SIA5	O15466	376 aa		7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	C21orf2	O43822	256 aa		7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	UPP2	O95045	317 aa		7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	BMP2	P12643	396 aa		7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	IGFBP4	P22692	258 aa		7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	ATP2B4	P23634	1241 aa		7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	GPC1	P35052	558 aa		7.36	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms