RNA–Protein interactions for RNA: ENST00000537888.1

PEX11B-203, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2 BASIC

Gene PEX11B, Length 1,632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-203ENST00000537888 CACNA1FO60840 1977 aa16.04■□□□□ 0.16
PEX11B-203ENST00000537888 SNED1Q8TER0 1413 aa16.03■□□□□ 0.16
PEX11B-203ENST00000537888 SLC10A5Q5PT55 438 aa16.03■□□□□ 0.16
PEX11B-203ENST00000537888 UTP14AQ9BVJ6 771 aaKnown RBP16.03■□□□□ 0.16
PEX11B-203ENST00000537888 RNF181Q9P0P0 153 aa16.03■□□□□ 0.16
PEX11B-203ENST00000537888 HOXA10P31260 410 aaPredicted RBP16.02■□□□□ 0.16
PEX11B-203ENST00000537888 STK31Q9BXU1 1019 aa16.02■□□□□ 0.16
PEX11B-203ENST00000537888 LTBP3Q9NS15 1303 aa16.02■□□□□ 0.16
PEX11B-203ENST00000537888 LMNB1P20700 586 aa16.01■□□□□ 0.15
PEX11B-203ENST00000537888 GPBP1L1Q9HC44 474 aaPredicted RBP16.01■□□□□ 0.15
PEX11B-203ENST00000537888 ZNF219Q9P2Y4 722 aaPredicted RBP16.01■□□□□ 0.15
PEX11B-203ENST00000537888 NOP58Q9Y2X3 529 aaKnown RBP16.01■□□□□ 0.15
PEX11B-203ENST00000537888 CCT4P50991 539 aaKnown RBP16.01■□□□□ 0.15
PEX11B-203ENST00000537888 TRIM28Q13263 835 aaKnown RBP16.01■□□□□ 0.15
PEX11B-203ENST00000537888 SIRT2Q8IXJ6 389 aa16.01■□□□□ 0.15
PEX11B-203ENST00000537888 SYNE4Q8N205 404 aa16.01■□□□□ 0.15
PEX11B-203ENST00000537888 ZNF526Q8TF50 670 aaPredicted RBP16.01■□□□□ 0.15
PEX11B-203ENST00000537888 DDRGK1Q96HY6 314 aa16.01■□□□□ 0.15
PEX11B-203ENST00000537888 ANP32EQ9BTT0 268 aa16.01■□□□□ 0.15
PEX11B-203ENST00000537888 ZC3H4Q9UPT8 1303 aaKnown RBP16.01■□□□□ 0.15
PEX11B-203ENST00000537888 SH3TC1Q8TE82 1336 aa15.99■□□□□ 0.15
PEX11B-203ENST00000537888 ATP5J2-PTCD1G3V325 749 aa15.99■□□□□ 0.15
PEX11B-203ENST00000537888 ALDH1B1P30837 517 aa15.99■□□□□ 0.15
PEX11B-203ENST00000537888 SOGA3Q5TF21 947 aa15.99■□□□□ 0.15
PEX11B-203ENST00000537888 OLFM4Q6UX06 510 aa15.99■□□□□ 0.15
PEX11B-203ENST00000537888 RPAP2Q8IXW5 612 aaPredicted RBP15.99■□□□□ 0.15
PEX11B-203ENST00000537888 TRMT112Q9UI30 125 aaKnown RBP15.99■□□□□ 0.15
PEX11B-203ENST00000537888 LAMB2P55268 1798 aa15.99■□□□□ 0.15
PEX11B-203ENST00000537888 TIAM2Q8IVF5 1701 aa15.99■□□□□ 0.15
PEX11B-203ENST00000537888 DDX60Q8IY21 1712 aaKnown RBP15.98■□□□□ 0.15
PEX11B-203ENST00000537888 CCDC93Q567U6 631 aa15.98■□□□□ 0.15
PEX11B-203ENST00000537888 G2E3Q7L622 706 aa15.98■□□□□ 0.15
PEX11B-203ENST00000537888 CHD1LQ86WJ1 897 aa15.98■□□□□ 0.15
PEX11B-203ENST00000537888 ANKRD44Q8N8A2 993 aa15.98■□□□□ 0.15
PEX11B-203ENST00000537888 CRAMP1Q96RY5 1269 aa15.98■□□□□ 0.15
PEX11B-203ENST00000537888 TAOK3Q9H2K8 898 aa15.98■□□□□ 0.15
PEX11B-203ENST00000537888 ZBTB47Q9UFB7 747 aaPredicted RBP15.98■□□□□ 0.15
PEX11B-203ENST00000537888 KIF3CO14782 793 aa15.97■□□□□ 0.15
PEX11B-203ENST00000537888 HCLS1P14317 486 aaPredicted RBP15.97■□□□□ 0.15
PEX11B-203ENST00000537888 FLIIQ13045 1269 aa15.97■□□□□ 0.15
PEX11B-203ENST00000537888 RIC3Q7Z5B4 369 aa15.97■□□□□ 0.15
PEX11B-203ENST00000537888 SLC51AQ86UW1 340 aa15.97■□□□□ 0.15
PEX11B-203ENST00000537888 RPGRQ92834 1020 aaKnown RBP15.97■□□□□ 0.15
PEX11B-203ENST00000537888 NLRP3Q96P20 1036 aa15.97■□□□□ 0.15
PEX11B-203ENST00000537888 CEP350Q5VT06 3117 aa15.97■□□□□ 0.15
PEX11B-203ENST00000537888 C1QTNF8P60827 252 aa15.97■□□□□ 0.15
PEX11B-203ENST00000537888 C1orf115Q9H7X2 142 aa15.97■□□□□ 0.15
PEX11B-203ENST00000537888 CCDC88AQ3V6T2 1871 aa15.96■□□□□ 0.15
PEX11B-203ENST00000537888 DICER1Q9UPY3 1922 aaKnown RBP15.96■□□□□ 0.15
PEX11B-203ENST00000537888 ERICH6Q7L0X2 663 aa15.96■□□□□ 0.15
PEX11B-203ENST00000537888 DCTPP1Q9H773 170 aa15.96■□□□□ 0.15
PEX11B-203ENST00000537888 FAM89AQ96GI7 184 aa15.95■□□□□ 0.14
PEX11B-203ENST00000537888 RBM17Q96I25 401 aaKnown RBP15.95■□□□□ 0.14
PEX11B-203ENST00000537888 MYD88Q99836 296 aa15.95■□□□□ 0.14
PEX11B-203ENST00000537888 METTL22Q9BUU2 404 aaPredicted RBP15.95■□□□□ 0.14
PEX11B-203ENST00000537888 NMRK2Q9NPI5 230 aa15.95■□□□□ 0.14
PEX11B-203ENST00000537888 PI4KAP2A4QPH2 592 aa15.94■□□□□ 0.14
PEX11B-203ENST00000537888 DDX58O95786 925 aaKnown RBP15.94■□□□□ 0.14
PEX11B-203ENST00000537888 FKBP4Q02790 459 aaKnown RBP eCLIP15.94■□□□□ 0.14
PEX11B-203ENST00000537888 CEP85Q6P2H3 762 aa15.94■□□□□ 0.14
PEX11B-203ENST00000537888 KSR2Q6VAB6 950 aa15.94■□□□□ 0.14
PEX11B-203ENST00000537888 PI4KAP1Q8N8J0 262 aa15.94■□□□□ 0.14
PEX11B-203ENST00000537888 MAP3K2Q9Y2U5 619 aa15.94■□□□□ 0.14
PEX11B-203ENST00000537888 IGKV5-2P06315 115 aa15.94■□□□□ 0.14
PEX11B-203ENST00000537888 RTKN2Q8IZC4 609 aa15.94■□□□□ 0.14
PEX11B-203ENST00000537888 CCDC191Q8NCU4 936 aa15.94■□□□□ 0.14
PEX11B-203ENST00000537888 MEIS3Q99687 375 aa15.94■□□□□ 0.14
PEX11B-203ENST00000537888 COL4A1P02462 1669 aa15.93■□□□□ 0.14
PEX11B-203ENST00000537888 PPEF1O14829 653 aaPredicted RBP15.93■□□□□ 0.14
PEX11B-203ENST00000537888 CC2D2BQ6DHV5 1058 aa15.93■□□□□ 0.14
PEX11B-203ENST00000537888 ZBTB38Q8NAP3 1195 aaPredicted RBP15.93■□□□□ 0.14
PEX11B-203ENST00000537888 GLTPD2A6NH11 291 aa15.92■□□□□ 0.14
PEX11B-203ENST00000537888 FKBP5Q13451 457 aaPredicted RBP15.92■□□□□ 0.14
PEX11B-203ENST00000537888 SF3B3Q15393 1217 aaKnown RBP15.92■□□□□ 0.14
PEX11B-203ENST00000537888 ANKRD45Q5TZF3 282 aa15.92■□□□□ 0.14
PEX11B-203ENST00000537888 PSMD1Q99460 953 aa15.92■□□□□ 0.14
PEX11B-203ENST00000537888 LNPKQ9C0E8 428 aa15.92■□□□□ 0.14
PEX11B-203ENST00000537888 F6X3S4 739 aa15.91■□□□□ 0.14
PEX11B-203ENST00000537888 IRS4O14654 1257 aaPredicted RBP15.91■□□□□ 0.14
PEX11B-203ENST00000537888 PCCAP05165 728 aaPredicted RBP15.91■□□□□ 0.14
PEX11B-203ENST00000537888 GNAI3P08754 354 aa15.91■□□□□ 0.14
PEX11B-203ENST00000537888 RTL5Q5HYW3 569 aaPredicted RBP15.91■□□□□ 0.14
PEX11B-203ENST00000537888 ZNF277Q9NRM2 450 aaPredicted RBP15.91■□□□□ 0.14
PEX11B-203ENST00000537888 CWC25Q9NXE8 425 aaPredicted RBP15.91■□□□□ 0.14
PEX11B-203ENST00000537888 ATP6V0A2Q9Y487 856 aa15.91■□□□□ 0.14
PEX11B-203ENST00000537888 COL4A5P29400 1685 aa15.91■□□□□ 0.14
PEX11B-203ENST00000537888 SEC24BO95487 1268 aa15.9■□□□□ 0.14
PEX11B-203ENST00000537888 GRAPQ13588 217 aa15.9■□□□□ 0.14
PEX11B-203ENST00000537888 BMP2KLQ5H9B9 411 aa15.9■□□□□ 0.14
PEX11B-203ENST00000537888 GRAPLQ8TC17 118 aaPredicted RBP15.9■□□□□ 0.14
PEX11B-203ENST00000537888 LRRC37AA6NMS7 1700 aa15.9■□□□□ 0.14
PEX11B-203ENST00000537888 HMMRO75330 724 aa15.9■□□□□ 0.14
PEX11B-203ENST00000537888 GNAI2P04899 355 aa15.9■□□□□ 0.14
PEX11B-203ENST00000537888 SLC4A10Q6U841 1118 aa15.9■□□□□ 0.14
PEX11B-203ENST00000537888 WDR90Q96KV7 1748 aa15.89■□□□□ 0.13
PEX11B-203ENST00000537888 TAF1P21675 1872 aa15.89■□□□□ 0.13
PEX11B-203ENST00000537888 NEURL1BA8MQ27 555 aa15.89■□□□□ 0.13
PEX11B-203ENST00000537888 BBOX1O75936 387 aa15.89■□□□□ 0.13
PEX11B-203ENST00000537888 GRIPAP1Q4V328 841 aa15.89■□□□□ 0.13
PEX11B-203ENST00000537888 DDX46Q7L014 1031 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms