RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 NUCKS1Q9H1E3 243 aaKnown RBP9.47□□□□□ -0.89
SNHG1-205ENST00000537869 CHRDQ9H2X0 955 aa9.47□□□□□ -0.89
SNHG1-205ENST00000537869 C11orf16Q9NQ32 467 aa9.47□□□□□ -0.89
SNHG1-205ENST00000537869 CUEDC1Q9NWM3 386 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-205ENST00000537869 AK5Q9Y6K8 562 aa9.47□□□□□ -0.89
SNHG1-205ENST00000537869 DCDC2BA2VCK2 349 aa9.46□□□□□ -0.9
SNHG1-205ENST00000537869 KHNYNO15037 678 aaKnown RBP9.46□□□□□ -0.9
SNHG1-205ENST00000537869 EFSO43281 561 aa9.46□□□□□ -0.9
SNHG1-205ENST00000537869 FAM157BP0CG42 384 aa9.46□□□□□ -0.9
SNHG1-205ENST00000537869 CCDC155Q8N6L0 562 aa9.46□□□□□ -0.9
SNHG1-205ENST00000537869 ABI2Q9NYB9 513 aaPredicted RBP9.46□□□□□ -0.9
SNHG1-205ENST00000537869 HCN2Q9UL51 889 aa9.46□□□□□ -0.9
SNHG1-205ENST00000537869 EREGO14944 169 aa9.45□□□□□ -0.9
SNHG1-205ENST00000537869 TARSP26639 723 aaKnown RBP9.45□□□□□ -0.9
SNHG1-205ENST00000537869 TNP2Q05952 138 aa9.45□□□□□ -0.9
SNHG1-205ENST00000537869 GRIN2CQ14957 1233 aa9.45□□□□□ -0.9
SNHG1-205ENST00000537869 KRT25Q7Z3Z0 450 aa9.45□□□□□ -0.9
SNHG1-205ENST00000537869 GSX2Q9BZM3 304 aa9.45□□□□□ -0.9
SNHG1-205ENST00000537869 STRN4Q9NRL3 753 aa9.45□□□□□ -0.9
SNHG1-205ENST00000537869 H7C1W4 665 aa9.44□□□□□ -0.9
SNHG1-205ENST00000537869 SCAMP3O14828 347 aaKnown RBP9.44□□□□□ -0.9
SNHG1-205ENST00000537869 BNIP3LO60238 219 aa9.44□□□□□ -0.9
SNHG1-205ENST00000537869 MAPTP10636 758 aaKnown RBP9.44□□□□□ -0.9
SNHG1-205ENST00000537869 ITGAEP38570 1179 aa9.44□□□□□ -0.9
SNHG1-205ENST00000537869 CCINQ13939 588 aa9.44□□□□□ -0.9
SNHG1-205ENST00000537869 TTC39BQ5VTQ0 682 aaPredicted RBP9.44□□□□□ -0.9
SNHG1-205ENST00000537869 C9orf131Q5VYM1 1079 aa9.44□□□□□ -0.9
SNHG1-205ENST00000537869 FRMD6Q96NE9 622 aa9.44□□□□□ -0.9
SNHG1-205ENST00000537869 SPG7Q9UQ90 795 aa9.44□□□□□ -0.9
SNHG1-205ENST00000537869 CYP2E1P05181 493 aaPredicted RBP9.43□□□□□ -0.9
SNHG1-205ENST00000537869 CTSHP09668 335 aa9.43□□□□□ -0.9
SNHG1-205ENST00000537869 HDLBPQ00341 1268 aaKnown RBP9.43□□□□□ -0.9
SNHG1-205ENST00000537869 TRIM22Q8IYM9 498 aa9.43□□□□□ -0.9
SNHG1-205ENST00000537869 OSBPL7Q9BZF2 842 aa9.43□□□□□ -0.9
SNHG1-205ENST00000537869 SENP2Q9HC62 589 aa9.43□□□□□ -0.9
SNHG1-205ENST00000537869 NDFIP2Q9NV92 336 aa9.43□□□□□ -0.9
SNHG1-205ENST00000537869 NLRP2Q9NX02 1062 aa9.43□□□□□ -0.9
SNHG1-205ENST00000537869 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.43□□□□□ -0.9
SNHG1-205ENST00000537869 GALNT12Q8IXK2 581 aa9.42□□□□□ -0.9
SNHG1-205ENST00000537869 KIFC2Q96AC6 838 aa9.42□□□□□ -0.9
SNHG1-205ENST00000537869 NPHS2Q9NP85 383 aa9.42□□□□□ -0.9
SNHG1-205ENST00000537869 GMPR2Q9P2T1 348 aaKnown RBP9.42□□□□□ -0.9
SNHG1-205ENST00000537869 MMP20O60882 483 aa9.41□□□□□ -0.9
SNHG1-205ENST00000537869 CES1P23141 567 aa9.41□□□□□ -0.9
SNHG1-205ENST00000537869 EIF4BP23588 611 aaKnown RBP9.41□□□□□ -0.9
SNHG1-205ENST00000537869 PMEPA1Q969W9 287 aa9.41□□□□□ -0.9
SNHG1-205ENST00000537869 ABHD17AQ96GS6 310 aa9.41□□□□□ -0.9
SNHG1-205ENST00000537869 TRIM47Q96LD4 638 aa9.41□□□□□ -0.9
SNHG1-205ENST00000537869 MARK1Q9P0L2 795 aa9.41□□□□□ -0.9
SNHG1-205ENST00000537869 ZFATQ9P243 1243 aa9.41□□□□□ -0.9
SNHG1-205ENST00000537869 IGSF3O75054 1194 aa9.4□□□□□ -0.9
SNHG1-205ENST00000537869 LAMC2Q13753 1193 aa9.4□□□□□ -0.9
SNHG1-205ENST00000537869 ZNF837Q96EG3 531 aaPredicted RBP9.4□□□□□ -0.9
SNHG1-205ENST00000537869 C12orf49Q9H741 205 aa9.4□□□□□ -0.9
SNHG1-205ENST00000537869 KANSL3Q9P2N6 904 aa9.4□□□□□ -0.9
SNHG1-205ENST00000537869 GIPC1O14908 333 aa9.39□□□□□ -0.91
SNHG1-205ENST00000537869 RARAP10276 462 aa9.39□□□□□ -0.91
SNHG1-205ENST00000537869 SNRPBP14678 240 aaKnown RBP9.39□□□□□ -0.91
SNHG1-205ENST00000537869 CD33P20138 364 aa9.39□□□□□ -0.91
SNHG1-205ENST00000537869 ITGA6P23229 1130 aa9.39□□□□□ -0.91
SNHG1-205ENST00000537869 GTPBP3Q969Y2 492 aaKnown RBP9.39□□□□□ -0.91
SNHG1-205ENST00000537869 SLC30A3Q99726 388 aa9.39□□□□□ -0.91
SNHG1-205ENST00000537869 GADD45BO75293 160 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-205ENST00000537869 ERCC5P28715 1186 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-205ENST00000537869 FANCCQ00597 558 aa9.38□□□□□ -0.91
SNHG1-205ENST00000537869 SPEM2Q0P670 501 aa9.38□□□□□ -0.91
SNHG1-205ENST00000537869 NXPE4Q6UWF7 544 aa9.38□□□□□ -0.91
SNHG1-205ENST00000537869 METTL16Q86W50 562 aaKnown RBP9.38□□□□□ -0.91
SNHG1-205ENST00000537869 OR13H1Q8NG92 308 aa9.38□□□□□ -0.91
SNHG1-205ENST00000537869 CRELD1Q96HD1 420 aa9.38□□□□□ -0.91
SNHG1-205ENST00000537869 BCO2Q9BYV7 579 aa9.38□□□□□ -0.91
SNHG1-205ENST00000537869 IRX2Q9BZI1 471 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-205ENST00000537869 LATS2Q9NRM7 1088 aa9.38□□□□□ -0.91
SNHG1-205ENST00000537869 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-205ENST00000537869 NFKB1P19838 968 aa9.37□□□□□ -0.91
SNHG1-205ENST00000537869 VEGFBP49765 207 aa9.37□□□□□ -0.91
SNHG1-205ENST00000537869 RAB44Q7Z6P3 723 aaPredicted RBP9.37□□□□□ -0.91
SNHG1-205ENST00000537869 GMCL1Q96IK5 515 aa9.37□□□□□ -0.91
SNHG1-205ENST00000537869 PNMA5Q96PV4 448 aa9.37□□□□□ -0.91
SNHG1-205ENST00000537869 ZNF76P36508 570 aa9.36□□□□□ -0.91
SNHG1-205ENST00000537869 GRM2Q14416 872 aa9.36□□□□□ -0.91
SNHG1-205ENST00000537869 PEAR1Q5VY43 1037 aaPredicted RBP9.36□□□□□ -0.91
SNHG1-205ENST00000537869 NT5DC4Q86YG4 428 aa9.36□□□□□ -0.91
SNHG1-205ENST00000537869 BHMTQ93088 406 aa9.36□□□□□ -0.91
SNHG1-205ENST00000537869 RNF34Q969K3 372 aa9.36□□□□□ -0.91
SNHG1-205ENST00000537869 SUV39H2Q9H5I1 410 aa9.36□□□□□ -0.91
SNHG1-205ENST00000537869 METTL5Q9NRN9 209 aaKnown RBP9.36□□□□□ -0.91
SNHG1-205ENST00000537869 TLR7Q9NYK1 1049 aaKnown RBP9.36□□□□□ -0.91
SNHG1-205ENST00000537869 SALL4Q9UJQ4 1053 aa9.36□□□□□ -0.91
SNHG1-205ENST00000537869 ATXN7L1Q9ULK2 861 aaPredicted RBP9.36□□□□□ -0.91
SNHG1-205ENST00000537869 A0A1W2PP55 124 aa9.35□□□□□ -0.91
SNHG1-205ENST00000537869 PHF20L1A8MW92 1017 aa9.35□□□□□ -0.91
SNHG1-205ENST00000537869 RAD51AP2Q09MP3 1159 aa9.35□□□□□ -0.91
SNHG1-205ENST00000537869 COL13A1Q5TAT6 717 aaPredicted RBP9.35□□□□□ -0.91
SNHG1-205ENST00000537869 KIAA0319Q5VV43 1072 aa9.35□□□□□ -0.91
SNHG1-205ENST00000537869 FAM8A1Q9UBU6 413 aa9.35□□□□□ -0.91
SNHG1-205ENST00000537869 GPR25O00155 361 aa9.34□□□□□ -0.91
SNHG1-205ENST00000537869 PPFIA3O75145 1194 aa9.34□□□□□ -0.91
SNHG1-205ENST00000537869 PSAPP07602 524 aa9.34□□□□□ -0.91
SNHG1-205ENST00000537869 USP17L7P0C7H9 530 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms