RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 CEP85LQ5SZL2 805 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 ARFGAP2Q8N6H7 521 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 PPFIBP2Q8ND30 876 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 POTEJP0CG39 1038 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 SYKP43405 635 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 EFCC1Q9HA90 598 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 PRKAR2BP31323 418 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 KCNK9Q9NPC2 374 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 RABGAP1Q9Y3P9 1069 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 ALDH3A1P30838 453 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 SMC6Q96SB8 1091 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 CWC25Q9NXE8 425 aaPredicted RBP6.45□□□□□ -1.38
CSMD1-215ENST00000537824 U3KPZ7 1027 aaPredicted RBP6.45□□□□□ -1.38
CSMD1-215ENST00000537824 MROH2BQ7Z745 1585 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 ATP2B2Q01814 1243 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 TMCO4Q5TGY1 634 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 EXOC6BQ9Y2D4 811 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 PRRC2BQ5JSZ5 2229 aaKnown RBP6.45□□□□□ -1.38
CSMD1-215ENST00000537824 TUBBP07437 444 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 BIRC2Q13490 618 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 SNCBQ16143 134 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 SELENOOQ9BVL4 669 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 MYO7AQ13402 2215 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 SMARCA2P51531 1590 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 LRRC9Q6ZRR7 1453 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 GOLGA6BA6NDN3 693 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 SETDB1Q15047 1291 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 CCDC25Q86WR0 208 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 ZNF75DP51815 510 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 ICE2Q659A1 982 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 GBP7Q8N8V2 638 aaPredicted RBP6.45□□□□□ -1.38
CSMD1-215ENST00000537824 CTNNA3Q9UI47 895 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 TDRD12Q587J7 1177 aaKnown RBP6.45□□□□□ -1.38
CSMD1-215ENST00000537824 LRRC43Q8N309 656 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 UBLCP1Q8WVY7 318 aaPredicted RBP6.45□□□□□ -1.38
CSMD1-215ENST00000537824 GUCA1BQ9UMX6 200 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 MRFAP1Q9Y605 127 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 CABIN1Q9Y6J0 2220 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 TLDC2A0PJX2 215 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 VAV2P52735 878 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 MAP7Q14244 749 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 GAS2L2Q8NHY3 880 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 JRKLQ9Y4A0 524 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 LOC102724159A0A0B4J2E5 919 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 PWP2Q15269 919 aaKnown RBP6.45□□□□□ -1.38
CSMD1-215ENST00000537824 IL1RAPL2Q9NP60 686 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 GPRASP1Q5JY77 1395 aa6.45□□□□□ -1.38
CSMD1-215ENST00000537824 CFAP58Q5T655 872 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 CCDC170Q8IYT3 715 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 GOLGA5Q8TBA6 731 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 PHAXQ9H814 394 aaKnown RBP6.44□□□□□ -1.38
CSMD1-215ENST00000537824 CCDC174Q6PII3 467 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.44□□□□□ -1.382e-6■■■■■ 29.1
CSMD1-215ENST00000537824 MYH7BA7E2Y1 1941 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 HGSO14964 777 aaPredicted RBP6.44□□□□□ -1.38
CSMD1-215ENST00000537824 SF3A3Q12874 501 aaKnown RBP eCLIP6.44□□□□□ -1.38
CSMD1-215ENST00000537824 NKIRAS1Q9NYS0 192 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 SRGAP3O43295 1099 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 SNX21Q969T3 373 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 SLC4A2P04920 1241 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 UBA5Q9GZZ9 404 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 TXNDC9O14530 226 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.44□□□□□ -1.38
CSMD1-215ENST00000537824 MIER3Q7Z3K6 550 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 NECAB1Q8N987 351 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 TRIM7Q9C029 511 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 C8orf34Q49A92 452 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 GGNBP2Q9H3C7 697 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 CABP2Q9NPB3 220 aa6.44□□□□□ -1.38
CSMD1-215ENST00000537824 VCXQ9H320 206 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 CYLC1P35663 651 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-215ENST00000537824 TMX3Q96JJ7 454 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 SLC24A3Q9HC58 644 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 ODF2LQ9ULJ1 636 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 FAM186AA6NE01 2351 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 PPFIA3O75145 1194 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 IGHDP01880 384 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 TSHZ3Q63HK5 1081 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 CARD6Q9BX69 1037 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 NACAP1Q9BZK3 213 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 RARSP54136 660 aaKnown RBP6.43□□□□□ -1.38
CSMD1-215ENST00000537824 CCDC57Q2TAC2 916 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 N4BP2L2Q92802 583 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-215ENST00000537824 ZMAT2Q96NC0 199 aaKnown RBP6.43□□□□□ -1.38
CSMD1-215ENST00000537824 NAPGQ99747 312 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-215ENST00000537824 BAIAP2L1Q9UHR4 511 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 LUC7L3O95232 432 aaKnown RBP6.43□□□□□ -1.38
CSMD1-215ENST00000537824 PHLDB2Q86SQ0 1253 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 WDHD1O75717 1129 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-215ENST00000537824 TSPYL2Q9H2G4 693 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-215ENST00000537824 SPG7Q9UQ90 795 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 DHX29Q7Z478 1369 aaKnown RBP6.43□□□□□ -1.38
CSMD1-215ENST00000537824 ERCC3P19447 782 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 CTNNA2P26232 953 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 ZNF131P52739 623 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 DNM1Q05193 864 aaKnown RBP6.43□□□□□ -1.38
CSMD1-215ENST00000537824 FKBP4Q02790 459 aaKnown RBP eCLIP6.43□□□□□ -1.38
CSMD1-215ENST00000537824 RASEFQ8IZ41 740 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 STK38LQ9Y2H1 464 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 KIAA0753Q2KHM9 967 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms