RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 GRAPQ13588 217 aa19.22■□□□□ 0.67
SRRM4-202ENST00000537597 INTS3Q68E01 1043 aaKnown RBP19.22■□□□□ 0.67
SRRM4-202ENST00000537597 OLFM4Q6UX06 510 aa19.22■□□□□ 0.67
SRRM4-202ENST00000537597 UBE3BQ7Z3V4 1068 aa19.22■□□□□ 0.67
SRRM4-202ENST00000537597 GRAPLQ8TC17 118 aaPredicted RBP19.22■□□□□ 0.67
SRRM4-202ENST00000537597 RPGRQ92834 1020 aaKnown RBP19.22■□□□□ 0.67
SRRM4-202ENST00000537597 API5Q9BZZ5 524 aaKnown RBP19.22■□□□□ 0.67
SRRM4-202ENST00000537597 TAF1P21675 1872 aa19.22■□□□□ 0.67
SRRM4-202ENST00000537597 KIF16BQ96L93 1317 aa19.22■□□□□ 0.67
SRRM4-202ENST00000537597 NBPF7P0C2Y1 421 aaPredicted RBP19.21■□□□□ 0.67
SRRM4-202ENST00000537597 TRIM27P14373 513 aa19.21■□□□□ 0.67
SRRM4-202ENST00000537597 CTSWP56202 376 aa19.21■□□□□ 0.67
SRRM4-202ENST00000537597 EPHA10Q5JZY3 1008 aa19.21■□□□□ 0.67
SRRM4-202ENST00000537597 CC2D2BQ6DHV5 1058 aa19.21■□□□□ 0.67
SRRM4-202ENST00000537597 ARHGAP27Q6ZUM4 889 aa19.21■□□□□ 0.67
SRRM4-202ENST00000537597 SP8Q8IXZ3 490 aa19.21■□□□□ 0.67
SRRM4-202ENST00000537597 CELF1Q92879 486 aaKnown RBP19.21■□□□□ 0.67
SRRM4-202ENST00000537597 TNNQ9UQP3 1299 aa19.21■□□□□ 0.67
SRRM4-202ENST00000537597 ATP6V0A2Q9Y487 856 aa19.21■□□□□ 0.67
SRRM4-202ENST00000537597 SOGA3Q5TF21 947 aa19.2■□□□□ 0.66
SRRM4-202ENST00000537597 SLC4A10Q6U841 1118 aa19.2■□□□□ 0.66
SRRM4-202ENST00000537597 ATF7IPQ6VMQ6 1270 aa19.2■□□□□ 0.66
SRRM4-202ENST00000537597 SEC31BQ9NQW1 1179 aa19.2■□□□□ 0.66
SRRM4-202ENST00000537597 DDX46Q7L014 1031 aaKnown RBP19.19■□□□□ 0.66
SRRM4-202ENST00000537597 LRRC37AA6NMS7 1700 aa19.18■□□□□ 0.66
SRRM4-202ENST00000537597 CCT4P50991 539 aaKnown RBP19.18■□□□□ 0.66
SRRM4-202ENST00000537597 RPS8P62241 208 aaKnown RBP19.18■□□□□ 0.66
SRRM4-202ENST00000537597 RABL6Q3YEC7 729 aaPredicted RBP19.18■□□□□ 0.66
SRRM4-202ENST00000537597 CCDC152Q4G0S7 254 aa19.18■□□□□ 0.66
SRRM4-202ENST00000537597 GRIPAP1Q4V328 841 aa19.18■□□□□ 0.66
SRRM4-202ENST00000537597 TMC4Q7Z404 712 aa19.18■□□□□ 0.66
SRRM4-202ENST00000537597 PSMD1Q99460 953 aa19.18■□□□□ 0.66
SRRM4-202ENST00000537597 RTFDC1Q9BY42 306 aaPredicted RBP19.18■□□□□ 0.66
SRRM4-202ENST00000537597 CACNA1SQ13698 1873 aa19.18■□□□□ 0.66
SRRM4-202ENST00000537597 PPEF1O14829 653 aaPredicted RBP19.17■□□□□ 0.66
SRRM4-202ENST00000537597 IPO8O15397 1037 aaKnown RBP19.17■□□□□ 0.66
SRRM4-202ENST00000537597 CCDC93Q567U6 631 aa19.17■□□□□ 0.66
SRRM4-202ENST00000537597 RTKN2Q8IZC4 609 aa19.17■□□□□ 0.66
SRRM4-202ENST00000537597 GREM2Q9H772 168 aa19.17■□□□□ 0.66
SRRM4-202ENST00000537597 MYH3P11055 1940 aa19.17■□□□□ 0.66
SRRM4-202ENST00000537597 FKBP4Q02790 459 aaKnown RBP eCLIP19.16■□□□□ 0.66
SRRM4-202ENST00000537597 RASSF7Q02833 373 aa19.16■□□□□ 0.66
SRRM4-202ENST00000537597 SUCLG2Q96I99 432 aa19.16■□□□□ 0.66
SRRM4-202ENST00000537597 LTBP1Q14766 1721 aa19.15■□□□□ 0.66
SRRM4-202ENST00000537597 ANKRD44Q8N8A2 993 aa19.15■□□□□ 0.66
SRRM4-202ENST00000537597 ZNF219Q9P2Y4 722 aaPredicted RBP19.15■□□□□ 0.66
SRRM4-202ENST00000537597 LMNB1P20700 586 aa19.14■□□□□ 0.65
SRRM4-202ENST00000537597 C9orf131Q5VYM1 1079 aa19.14■□□□□ 0.65
SRRM4-202ENST00000537597 ZKSCAN2Q63HK3 967 aa19.14■□□□□ 0.65
SRRM4-202ENST00000537597 C9orf78Q9NZ63 289 aaPredicted RBP19.14■□□□□ 0.65
SRRM4-202ENST00000537597 DUOX1Q9NRD9 1551 aa19.14■□□□□ 0.65
SRRM4-202ENST00000537597 RLBP1P12271 317 aa19.13■□□□□ 0.65
SRRM4-202ENST00000537597 TAOK3Q9H2K8 898 aa19.13■□□□□ 0.65
SRRM4-202ENST00000537597 BSDC1Q9NW68 430 aaPredicted RBP19.13■□□□□ 0.65
SRRM4-202ENST00000537597 PODXL2Q9NZ53 605 aa19.13■□□□□ 0.65
SRRM4-202ENST00000537597 DICER1Q9UPY3 1922 aaKnown RBP19.12■□□□□ 0.65
SRRM4-202ENST00000537597 YY1P25490 414 aa19.12■□□□□ 0.65
SRRM4-202ENST00000537597 LMBR1LQ6UX01 489 aa19.12■□□□□ 0.65
SRRM4-202ENST00000537597 VPS33BQ9H267 617 aa19.12■□□□□ 0.65
SRRM4-202ENST00000537597 RCAN3Q9UKA8 241 aa19.12■□□□□ 0.65
SRRM4-202ENST00000537597 COL4A5P29400 1685 aa19.11■□□□□ 0.65
SRRM4-202ENST00000537597 ZC3H4Q9UPT8 1303 aaKnown RBP19.11■□□□□ 0.65
SRRM4-202ENST00000537597 ITGA6P23229 1130 aa19.11■□□□□ 0.65
SRRM4-202ENST00000537597 FAM161AQ3B820 660 aa19.11■□□□□ 0.65
SRRM4-202ENST00000537597 CCDC85AQ96PX6 553 aaPredicted RBP19.11■□□□□ 0.65
SRRM4-202ENST00000537597 CCDC88AQ3V6T2 1871 aa19.11■□□□□ 0.65
SRRM4-202ENST00000537597 TMEM57Q8N5G2 664 aa19.1■□□□□ 0.65
SRRM4-202ENST00000537597 FRAT1Q92837 279 aaPredicted RBP19.1■□□□□ 0.65
SRRM4-202ENST00000537597 MEIS3Q99687 375 aa19.1■□□□□ 0.65
SRRM4-202ENST00000537597 BICC1Q9H694 974 aaKnown RBP19.1■□□□□ 0.65
SRRM4-202ENST00000537597 MINPP1Q9UNW1 487 aa19.1■□□□□ 0.65
SRRM4-202ENST00000537597 RFX5P48382 616 aaPredicted RBP19.09■□□□□ 0.65
SRRM4-202ENST00000537597 GPSM2P81274 684 aa19.09■□□□□ 0.65
SRRM4-202ENST00000537597 CDC5LQ99459 802 aaKnown RBP19.09■□□□□ 0.65
SRRM4-202ENST00000537597 POLLQ9UGP5 575 aa19.09■□□□□ 0.65
SRRM4-202ENST00000537597 ZBTB7BO15156 539 aaPredicted RBP19.08■□□□□ 0.64
SRRM4-202ENST00000537597 ANKRD18AQ8IVF6 992 aa19.08■□□□□ 0.64
SRRM4-202ENST00000537597 MPNDQ8N594 471 aa19.08■□□□□ 0.64
SRRM4-202ENST00000537597 ZNF784Q8NCA9 323 aaPredicted RBP19.08■□□□□ 0.64
SRRM4-202ENST00000537597 ZNF277Q9NRM2 450 aaPredicted RBP19.08■□□□□ 0.64
SRRM4-202ENST00000537597 RNF181Q9P0P0 153 aa19.08■□□□□ 0.64
SRRM4-202ENST00000537597 FZD9O00144 591 aa19.07■□□□□ 0.64
SRRM4-202ENST00000537597 IARSP41252 1262 aaKnown RBP19.07■□□□□ 0.64
SRRM4-202ENST00000537597 DZIP1LQ8IYY4 767 aaKnown RBP19.07■□□□□ 0.64
SRRM4-202ENST00000537597 CLUAP1Q96AJ1 413 aa19.07■□□□□ 0.64
SRRM4-202ENST00000537597 IRS2Q9Y4H2 1338 aa19.06■□□□□ 0.64
SRRM4-202ENST00000537597 WTIPA6NIX2 430 aaPredicted RBP19.06■□□□□ 0.64
SRRM4-202ENST00000537597 MTX1Q13505 466 aa19.06■□□□□ 0.64
SRRM4-202ENST00000537597 TBC1D16Q8TBP0 767 aa19.06■□□□□ 0.64
SRRM4-202ENST00000537597 ANKRD18BA2A2Z9 1011 aa19.05■□□□□ 0.64
SRRM4-202ENST00000537597 KIAA2012Q0VF49 1180 aa19.05■□□□□ 0.64
SRRM4-202ENST00000537597 IFIT5Q13325 482 aaKnown RBP19.05■□□□□ 0.64
SRRM4-202ENST00000537597 DPP8Q6V1X1 898 aaPredicted RBP19.05■□□□□ 0.64
SRRM4-202ENST00000537597 RIPOR2Q9Y4F9 1068 aa19.05■□□□□ 0.64
SRRM4-202ENST00000537597 GNAI3P08754 354 aa19.04■□□□□ 0.64
SRRM4-202ENST00000537597 UBTFL1P0CB47 393 aaPredicted RBP19.03■□□□□ 0.64
SRRM4-202ENST00000537597 PTPN12Q05209 780 aaKnown RBP19.03■□□□□ 0.64
SRRM4-202ENST00000537597 SUPT20HQ8NEM7 779 aa19.03■□□□□ 0.64
SRRM4-202ENST00000537597 ZNF594Q96JF6 807 aaPredicted RBP19.03■□□□□ 0.64
SRRM4-202ENST00000537597 YTHDC1Q96MU7 727 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms