RNA–Protein interactions for RNA: ENST00000536996.5

SPPL3-204, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-204ENST00000536996 USP44Q9H0E7 712 aa18.21■□□□□ 0.51
SPPL3-204ENST00000536996 RTL9Q8NET4 1388 aa18.2■□□□□ 0.5
SPPL3-204ENST00000536996 CTSWP56202 376 aa18.2■□□□□ 0.5
SPPL3-204ENST00000536996 FTSJ3Q8IY81 847 aaKnown RBP18.2■□□□□ 0.5
SPPL3-204ENST00000536996 CLUAP1Q96AJ1 413 aa18.2■□□□□ 0.5
SPPL3-204ENST00000536996 RBM17Q96I25 401 aaKnown RBP18.2■□□□□ 0.5
SPPL3-204ENST00000536996 TNNQ9UQP3 1299 aa18.2■□□□□ 0.5
SPPL3-204ENST00000536996 COL4A1P02462 1669 aa18.19■□□□□ 0.5
SPPL3-204ENST00000536996 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
SPPL3-204ENST00000536996 NBPF7P0C2Y1 421 aaPredicted RBP18.19■□□□□ 0.5
SPPL3-204ENST00000536996 CCDC152Q4G0S7 254 aa18.19■□□□□ 0.5
SPPL3-204ENST00000536996 BCS1LQ9Y276 419 aa18.19■□□□□ 0.5
SPPL3-204ENST00000536996 YBX3P16989 372 aaKnown RBP eCLIP18.18■□□□□ 0.5
SPPL3-204ENST00000536996 PRPF40BQ6NWY9 871 aaKnown RBP18.18■□□□□ 0.5
SPPL3-204ENST00000536996 DDX46Q7L014 1031 aaKnown RBP18.18■□□□□ 0.5
SPPL3-204ENST00000536996 HDAC5Q9UQL6 1122 aa18.18■□□□□ 0.5
SPPL3-204ENST00000536996 LTBP1Q14766 1721 aa18.18■□□□□ 0.5
SPPL3-204ENST00000536996 CSF1RP07333 972 aa18.17■□□□□ 0.5
SPPL3-204ENST00000536996 GPR162Q16538 588 aa18.17■□□□□ 0.5
SPPL3-204ENST00000536996 TMEM57Q8N5G2 664 aa18.17■□□□□ 0.5
SPPL3-204ENST00000536996 TTLL11Q8NHH1 800 aa18.17■□□□□ 0.5
SPPL3-204ENST00000536996 GOLGB1Q14789 3259 aaKnown RBP18.17■□□□□ 0.5
SPPL3-204ENST00000536996 GRIN3BO60391 1043 aa18.16■□□□□ 0.5
SPPL3-204ENST00000536996 FOXO4P98177 505 aa18.16■□□□□ 0.5
SPPL3-204ENST00000536996 GRAPQ13588 217 aa18.16■□□□□ 0.5
SPPL3-204ENST00000536996 PELP1Q8IZL8 1130 aaKnown RBP18.16■□□□□ 0.5
SPPL3-204ENST00000536996 GRAPLQ8TC17 118 aaPredicted RBP18.16■□□□□ 0.5
SPPL3-204ENST00000536996 BBOX1O75936 387 aa18.15■□□□□ 0.5
SPPL3-204ENST00000536996 GNAI3P08754 354 aa18.15■□□□□ 0.5
SPPL3-204ENST00000536996 UBTFL1P0CB47 393 aaPredicted RBP18.15■□□□□ 0.5
SPPL3-204ENST00000536996 RLBP1P12271 317 aa18.15■□□□□ 0.5
SPPL3-204ENST00000536996 PDE3AQ14432 1141 aa18.15■□□□□ 0.5
SPPL3-204ENST00000536996 SOGA3Q5TF21 947 aa18.15■□□□□ 0.5
SPPL3-204ENST00000536996 TMC4Q7Z404 712 aa18.15■□□□□ 0.5
SPPL3-204ENST00000536996 C7orf43Q8WVR3 580 aa18.15■□□□□ 0.5
SPPL3-204ENST00000536996 KAZALD1Q96I82 304 aa18.15■□□□□ 0.5
SPPL3-204ENST00000536996 SUCLG2Q96I99 432 aa18.15■□□□□ 0.5
SPPL3-204ENST00000536996 WWC3Q9ULE0 1092 aa18.15■□□□□ 0.5
SPPL3-204ENST00000536996 MEIS3Q99687 375 aa18.14■□□□□ 0.49
SPPL3-204ENST00000536996 TIAM2Q8IVF5 1701 aa18.13■□□□□ 0.49
SPPL3-204ENST00000536996 PLIN1O60240 522 aa18.13■□□□□ 0.49
SPPL3-204ENST00000536996 RABL6Q3YEC7 729 aaPredicted RBP18.13■□□□□ 0.49
SPPL3-204ENST00000536996 EPHA10Q5JZY3 1008 aa18.13■□□□□ 0.49
SPPL3-204ENST00000536996 CC2D2BQ6DHV5 1058 aa18.13■□□□□ 0.49
SPPL3-204ENST00000536996 PANK1Q8TE04 598 aa18.13■□□□□ 0.49
SPPL3-204ENST00000536996 GREM2Q9H772 168 aa18.13■□□□□ 0.49
SPPL3-204ENST00000536996 SNED1Q8TER0 1413 aa18.13■□□□□ 0.49
SPPL3-204ENST00000536996 PPEF1O14829 653 aaPredicted RBP18.12■□□□□ 0.49
SPPL3-204ENST00000536996 RRP1P56182 461 aaKnown RBP18.12■□□□□ 0.49
SPPL3-204ENST00000536996 GRIPAP1Q4V328 841 aa18.12■□□□□ 0.49
SPPL3-204ENST00000536996 LMBR1LQ6UX01 489 aa18.12■□□□□ 0.49
SPPL3-204ENST00000536996 ITPRIPQ8IWB1 547 aa18.12■□□□□ 0.49
SPPL3-204ENST00000536996 CDC5LQ99459 802 aaKnown RBP18.12■□□□□ 0.49
SPPL3-204ENST00000536996 BICC1Q9H694 974 aaKnown RBP18.12■□□□□ 0.49
SPPL3-204ENST00000536996 C21orf2O43822 256 aa18.11■□□□□ 0.49
SPPL3-204ENST00000536996 RPS8P62241 208 aaKnown RBP18.11■□□□□ 0.49
SPPL3-204ENST00000536996 MVPQ14764 893 aaKnown RBP18.11■□□□□ 0.49
SPPL3-204ENST00000536996 SP8Q8IXZ3 490 aa18.11■□□□□ 0.49
SPPL3-204ENST00000536996 CELF1Q92879 486 aaKnown RBP18.11■□□□□ 0.49
SPPL3-204ENST00000536996 SEC31BQ9NQW1 1179 aa18.11■□□□□ 0.49
SPPL3-204ENST00000536996 ATP6V0A2Q9Y487 856 aa18.11■□□□□ 0.49
SPPL3-204ENST00000536996 ZBTB7BO15156 539 aaPredicted RBP18.1■□□□□ 0.49
SPPL3-204ENST00000536996 ITGA6P23229 1130 aa18.1■□□□□ 0.49
SPPL3-204ENST00000536996 FAM161AQ3B820 660 aa18.1■□□□□ 0.49
SPPL3-204ENST00000536996 CCDC93Q567U6 631 aa18.1■□□□□ 0.49
SPPL3-204ENST00000536996 ANKRD18AQ8IVF6 992 aa18.1■□□□□ 0.49
SPPL3-204ENST00000536996 ANKRD44Q8N8A2 993 aa18.1■□□□□ 0.49
SPPL3-204ENST00000536996 CCDC85AQ96PX6 553 aaPredicted RBP18.1■□□□□ 0.49
SPPL3-204ENST00000536996 DDX19BQ9UMR2 479 aa18.1■□□□□ 0.49
SPPL3-204ENST00000536996 DUOX1Q9NRD9 1551 aa18.09■□□□□ 0.49
SPPL3-204ENST00000536996 LTBP3Q9NS15 1303 aa18.09■□□□□ 0.49
SPPL3-204ENST00000536996 ANKRD18BA2A2Z9 1011 aa18.09■□□□□ 0.49
SPPL3-204ENST00000536996 IFIT5Q13325 482 aaKnown RBP18.09■□□□□ 0.49
SPPL3-204ENST00000536996 TMX4Q9H1E5 349 aaPredicted RBP18.09■□□□□ 0.49
SPPL3-204ENST00000536996 CHMP4BQ9H444 224 aaKnown RBP18.09■□□□□ 0.49
SPPL3-204ENST00000536996 LRRFIP2Q9Y608 721 aaKnown RBP18.09■□□□□ 0.49
SPPL3-204ENST00000536996 GNAI2P04899 355 aa18.08■□□□□ 0.48
SPPL3-204ENST00000536996 CCDC57Q2TAC2 916 aa18.08■□□□□ 0.48
SPPL3-204ENST00000536996 RTKN2Q8IZC4 609 aa18.08■□□□□ 0.48
SPPL3-204ENST00000536996 COG6Q9Y2V7 657 aa18.08■□□□□ 0.48
SPPL3-204ENST00000536996 CHMP3Q9Y3E7 222 aa18.08■□□□□ 0.48
SPPL3-204ENST00000536996 PSME4Q14997 1843 aa18.07■□□□□ 0.48
SPPL3-204ENST00000536996 IGHMBP2P38935 993 aaKnown RBP18.07■□□□□ 0.48
SPPL3-204ENST00000536996 MTX1Q13505 466 aa18.07■□□□□ 0.48
SPPL3-204ENST00000536996 C20orf194Q5TEA3 1177 aa18.07■□□□□ 0.48
SPPL3-204ENST00000536996 ARHGAP27Q6ZUM4 889 aa18.07■□□□□ 0.48
SPPL3-204ENST00000536996 BSDC1Q9NW68 430 aaPredicted RBP18.07■□□□□ 0.48
SPPL3-204ENST00000536996 ZNF219Q9P2Y4 722 aaPredicted RBP18.07■□□□□ 0.48
SPPL3-204ENST00000536996 UTRNP46939 3433 aa18.06■□□□□ 0.48
SPPL3-204ENST00000536996 NFKBIEO00221 500 aa18.05■□□□□ 0.48
SPPL3-204ENST00000536996 OLFM4Q6UX06 510 aa18.05■□□□□ 0.48
SPPL3-204ENST00000536996 PSMD1Q99460 953 aa18.05■□□□□ 0.48
SPPL3-204ENST00000536996 MYH13Q9UKX3 1938 aa18.05■□□□□ 0.48
SPPL3-204ENST00000536996 FKBP4Q02790 459 aaKnown RBP eCLIP18.04■□□□□ 0.48
SPPL3-204ENST00000536996 MPHOSPH8Q99549 860 aa18.04■□□□□ 0.48
SPPL3-204ENST00000536996 TAOK3Q9H2K8 898 aa18.04■□□□□ 0.48
SPPL3-204ENST00000536996 TAF7LQ5H9L4 462 aa18.03■□□□□ 0.48
SPPL3-204ENST00000536996 MPNDQ8N594 471 aa18.03■□□□□ 0.48
SPPL3-204ENST00000536996 RTFDC1Q9BY42 306 aaPredicted RBP18.03■□□□□ 0.48
SPPL3-204ENST00000536996 ZBTB40Q9NUA8 1239 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms