RNA–Protein interactions for RNA: ENST00000536872.5

COPS7A-205, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-205ENST00000536872 GRAPQ13588 217 aa24.34■■□□□ 1.49
COPS7A-205ENST00000536872 CCDC93Q567U6 631 aa24.34■■□□□ 1.49
COPS7A-205ENST00000536872 SOGA3Q5TF21 947 aa24.34■■□□□ 1.49
COPS7A-205ENST00000536872 GRAPLQ8TC17 118 aaPredicted RBP24.34■■□□□ 1.49
COPS7A-205ENST00000536872 TMX4Q9H1E5 349 aaPredicted RBP24.34■■□□□ 1.49
COPS7A-205ENST00000536872 KIF16BQ96L93 1317 aa24.34■■□□□ 1.49
COPS7A-205ENST00000536872 IPO8O15397 1037 aaKnown RBP24.33■■□□□ 1.49
COPS7A-205ENST00000536872 BBOX1O75936 387 aa24.33■■□□□ 1.49
COPS7A-205ENST00000536872 CASP7P55210 303 aa24.33■■□□□ 1.49
COPS7A-205ENST00000536872 CTSWP56202 376 aa24.33■■□□□ 1.49
COPS7A-205ENST00000536872 C9orf131Q5VYM1 1079 aa24.33■■□□□ 1.49
COPS7A-205ENST00000536872 CELF1Q92879 486 aaKnown RBP24.33■■□□□ 1.49
COPS7A-205ENST00000536872 TAF1P21675 1872 aa24.32■■□□□ 1.48
COPS7A-205ENST00000536872 NFKBIEO00221 500 aa24.32■■□□□ 1.48
COPS7A-205ENST00000536872 RNF181Q9P0P0 153 aa24.32■■□□□ 1.48
COPS7A-205ENST00000536872 TTLL11Q8NHH1 800 aa24.31■■□□□ 1.48
COPS7A-205ENST00000536872 TAOK3Q9H2K8 898 aa24.31■■□□□ 1.48
COPS7A-205ENST00000536872 TNNQ9UQP3 1299 aa24.31■■□□□ 1.48
COPS7A-205ENST00000536872 RPS8P62241 208 aaKnown RBP24.3■■□□□ 1.48
COPS7A-205ENST00000536872 RTKN2Q8IZC4 609 aa24.3■■□□□ 1.48
COPS7A-205ENST00000536872 ARHGAP45Q92619 1136 aa24.3■■□□□ 1.48
COPS7A-205ENST00000536872 CLUAP1Q96AJ1 413 aa24.3■■□□□ 1.48
COPS7A-205ENST00000536872 CHMP3Q9Y3E7 222 aa24.3■■□□□ 1.48
COPS7A-205ENST00000536872 ATP6V0A2Q9Y487 856 aa24.3■■□□□ 1.48
COPS7A-205ENST00000536872 NBPF7P0C2Y1 421 aaPredicted RBP24.29■■□□□ 1.48
COPS7A-205ENST00000536872 CCT4P50991 539 aaKnown RBP24.29■■□□□ 1.48
COPS7A-205ENST00000536872 PLA2G12BQ9BX93 195 aa24.29■■□□□ 1.48
COPS7A-205ENST00000536872 GREM2Q9H772 168 aa24.29■■□□□ 1.48
COPS7A-205ENST00000536872 LMNB1P20700 586 aa24.28■■□□□ 1.48
COPS7A-205ENST00000536872 PRELPP51888 382 aa24.28■■□□□ 1.48
COPS7A-205ENST00000536872 ZKSCAN2Q63HK3 967 aa24.28■■□□□ 1.48
COPS7A-205ENST00000536872 CC2D2BQ6DHV5 1058 aa24.28■■□□□ 1.48
COPS7A-205ENST00000536872 ATF7IPQ6VMQ6 1270 aa24.28■■□□□ 1.48
COPS7A-205ENST00000536872 SP8Q8IXZ3 490 aa24.28■■□□□ 1.48
COPS7A-205ENST00000536872 TRIM27P14373 513 aa24.27■■□□□ 1.48
COPS7A-205ENST00000536872 EPHA10Q5JZY3 1008 aa24.27■■□□□ 1.48
COPS7A-205ENST00000536872 SUCLG2Q96I99 432 aa24.27■■□□□ 1.48
COPS7A-205ENST00000536872 ZNF277Q9NRM2 450 aaPredicted RBP24.27■■□□□ 1.48
COPS7A-205ENST00000536872 FOXO4P98177 505 aa24.26■■□□□ 1.47
COPS7A-205ENST00000536872 FKBP4Q02790 459 aaKnown RBP eCLIP24.26■■□□□ 1.47
COPS7A-205ENST00000536872 ANKRD18AQ8IVF6 992 aa24.26■■□□□ 1.47
COPS7A-205ENST00000536872 USP44Q9H0E7 712 aa24.26■■□□□ 1.47
COPS7A-205ENST00000536872 FAM161AQ3B820 660 aa24.25■■□□□ 1.47
COPS7A-205ENST00000536872 LMBR1LQ6UX01 489 aa24.25■■□□□ 1.47
COPS7A-205ENST00000536872 CDC5LQ99459 802 aaKnown RBP24.25■■□□□ 1.47
COPS7A-205ENST00000536872 RCAN3Q9UKA8 241 aa24.25■■□□□ 1.47
COPS7A-205ENST00000536872 CSF1RP07333 972 aa24.24■■□□□ 1.47
COPS7A-205ENST00000536872 MPNDQ8N594 471 aa24.24■■□□□ 1.47
COPS7A-205ENST00000536872 ZNF526Q8TF50 670 aaPredicted RBP24.24■■□□□ 1.47
COPS7A-205ENST00000536872 FER1L6Q2WGJ9 1857 aa24.24■■□□□ 1.47
COPS7A-205ENST00000536872 ITGA6P23229 1130 aa24.23■■□□□ 1.47
COPS7A-205ENST00000536872 DPP8Q6V1X1 898 aaPredicted RBP24.23■■□□□ 1.47
COPS7A-205ENST00000536872 TMC4Q7Z404 712 aa24.23■■□□□ 1.47
COPS7A-205ENST00000536872 SBF1O95248 1867 aa24.23■■□□□ 1.47
COPS7A-205ENST00000536872 CCDC88AQ3V6T2 1871 aa24.23■■□□□ 1.47
COPS7A-205ENST00000536872 MYH3P11055 1940 aa24.22■■□□□ 1.47
COPS7A-205ENST00000536872 COL4A1P02462 1669 aa24.22■■□□□ 1.47
COPS7A-205ENST00000536872 UTYO14607 1347 aa24.22■■□□□ 1.47
COPS7A-205ENST00000536872 LTBP3Q9NS15 1303 aa24.22■■□□□ 1.47
COPS7A-205ENST00000536872 NSFL1CQ9UNZ2 370 aaKnown RBP24.22■■□□□ 1.47
COPS7A-205ENST00000536872 ANKRD18BA2A2Z9 1011 aa24.21■■□□□ 1.47
COPS7A-205ENST00000536872 GRIPAP1Q4V328 841 aa24.21■■□□□ 1.47
COPS7A-205ENST00000536872 INTS3Q68E01 1043 aaKnown RBP24.21■■□□□ 1.47
COPS7A-205ENST00000536872 KAZALD1Q96I82 304 aa24.21■■□□□ 1.47
COPS7A-205ENST00000536872 BICC1Q9H694 974 aaKnown RBP24.21■■□□□ 1.47
COPS7A-205ENST00000536872 UBTFL1P0CB47 393 aaPredicted RBP24.2■■□□□ 1.46
COPS7A-205ENST00000536872 IGHMBP2P38935 993 aaKnown RBP24.2■■□□□ 1.46
COPS7A-205ENST00000536872 GPSM2P81274 684 aa24.2■■□□□ 1.46
COPS7A-205ENST00000536872 IFIT5Q13325 482 aaKnown RBP24.2■■□□□ 1.46
COPS7A-205ENST00000536872 FTSJ3Q8IY81 847 aaKnown RBP24.2■■□□□ 1.46
COPS7A-205ENST00000536872 ZNF784Q8NCA9 323 aaPredicted RBP24.2■■□□□ 1.46
COPS7A-205ENST00000536872 PSMD1Q99460 953 aa24.2■■□□□ 1.46
COPS7A-205ENST00000536872 IARSP41252 1262 aaKnown RBP24.19■■□□□ 1.46
COPS7A-205ENST00000536872 CCDC57Q2TAC2 916 aa24.19■■□□□ 1.46
COPS7A-205ENST00000536872 TMEM57Q8N5G2 664 aa24.19■■□□□ 1.46
COPS7A-205ENST00000536872 ANKIB1Q9P2G1 1089 aa24.19■■□□□ 1.46
COPS7A-205ENST00000536872 TAF7LQ5H9L4 462 aa24.18■■□□□ 1.46
COPS7A-205ENST00000536872 DZIP1LQ8IYY4 767 aaKnown RBP24.18■■□□□ 1.46
COPS7A-205ENST00000536872 ZNF594Q96JF6 807 aaPredicted RBP24.18■■□□□ 1.46
COPS7A-205ENST00000536872 MPHOSPH8Q99549 860 aa24.18■■□□□ 1.46
COPS7A-205ENST00000536872 MEIS3Q99687 375 aa24.18■■□□□ 1.46
COPS7A-205ENST00000536872 RTL9Q8NET4 1388 aa24.17■■□□□ 1.46
COPS7A-205ENST00000536872 C6orf229H3BNL8 230 aa24.17■■□□□ 1.46
COPS7A-205ENST00000536872 PLIN1O60240 522 aa24.17■■□□□ 1.46
COPS7A-205ENST00000536872 LARGE2Q8N3Y3 721 aa24.17■■□□□ 1.46
COPS7A-205ENST00000536872 SUPT20HQ8NEM7 779 aa24.17■■□□□ 1.46
COPS7A-205ENST00000536872 BSDC1Q9NW68 430 aaPredicted RBP24.17■■□□□ 1.46
COPS7A-205ENST00000536872 PPIP5K2O43314 1243 aa24.16■■□□□ 1.46
COPS7A-205ENST00000536872 AOC3Q16853 763 aa24.16■■□□□ 1.46
COPS7A-205ENST00000536872 ANKRD44Q8N8A2 993 aa24.16■■□□□ 1.46
COPS7A-205ENST00000536872 RLBP1P12271 317 aa24.15■■□□□ 1.46
COPS7A-205ENST00000536872 PANK1Q8TE04 598 aa24.15■■□□□ 1.46
COPS7A-205ENST00000536872 JDP2Q8WYK2 163 aa24.15■■□□□ 1.46
COPS7A-205ENST00000536872 GPR101Q96P66 508 aaPredicted RBP24.15■■□□□ 1.46
COPS7A-205ENST00000536872 MINPP1Q9UNW1 487 aa24.15■■□□□ 1.46
COPS7A-205ENST00000536872 LRRFIP2Q9Y608 721 aaKnown RBP24.15■■□□□ 1.46
COPS7A-205ENST00000536872 SNED1Q8TER0 1413 aa24.15■■□□□ 1.46
COPS7A-205ENST00000536872 RIMBP2O15034 1052 aa24.14■■□□□ 1.45
COPS7A-205ENST00000536872 ITPRIPQ8IWB1 547 aa24.14■■□□□ 1.45
COPS7A-205ENST00000536872 RTFDC1Q9BY42 306 aaPredicted RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms