RNA–Protein interactions for RNA: ENST00000536722.5

RFX4-205, Transcript of regulatory factor X4, humanhuman

TSL 2

Gene RFX4, Length 1,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-205ENST00000536722 SSH1Q8WYL5 1049 aa14.57□□□□□ -0.08
RFX4-205ENST00000536722 CWC25Q9NXE8 425 aaPredicted RBP14.57□□□□□ -0.08
RFX4-205ENST00000536722 RNF181Q9P0P0 153 aa14.57□□□□□ -0.08
RFX4-205ENST00000536722 LMNB1P20700 586 aa14.56□□□□□ -0.08
RFX4-205ENST00000536722 RBM17Q96I25 401 aaKnown RBP14.56□□□□□ -0.08
RFX4-205ENST00000536722 SPEF2Q9C093 1822 aa14.56□□□□□ -0.08
RFX4-205ENST00000536722 DUOX1Q9NRD9 1551 aa14.56□□□□□ -0.08
RFX4-205ENST00000536722 CASP7P55210 303 aa14.55□□□□□ -0.08
RFX4-205ENST00000536722 CCDC93Q567U6 631 aa14.55□□□□□ -0.08
RFX4-205ENST00000536722 TAOK3Q9H2K8 898 aa14.55□□□□□ -0.08
RFX4-205ENST00000536722 H7C1W4 665 aa14.54□□□□□ -0.08
RFX4-205ENST00000536722 PPEF1O14829 653 aaPredicted RBP14.54□□□□□ -0.08
RFX4-205ENST00000536722 GCKRQ14397 625 aa14.54□□□□□ -0.08
RFX4-205ENST00000536722 BEND3Q5T5X7 828 aa14.54□□□□□ -0.08
RFX4-205ENST00000536722 SOGA3Q5TF21 947 aa14.54□□□□□ -0.08
RFX4-205ENST00000536722 ZNF526Q8TF50 670 aaPredicted RBP14.54□□□□□ -0.08
RFX4-205ENST00000536722 BCL2L13Q9BXK5 485 aa14.54□□□□□ -0.08
RFX4-205ENST00000536722 CDHR2Q9BYE9 1310 aa14.54□□□□□ -0.08
RFX4-205ENST00000536722 HNRNPUQ00839 825 aaKnown RBP eCLIP14.53□□□□□ -0.08
RFX4-205ENST00000536722 FKBP4Q02790 459 aaKnown RBP eCLIP14.53□□□□□ -0.08
RFX4-205ENST00000536722 GRAPQ13588 217 aa14.53□□□□□ -0.08
RFX4-205ENST00000536722 POLA2Q14181 598 aa14.53□□□□□ -0.08
RFX4-205ENST00000536722 LINS1Q8NG48 757 aa14.53□□□□□ -0.08
RFX4-205ENST00000536722 GRAPLQ8TC17 118 aaPredicted RBP14.53□□□□□ -0.08
RFX4-205ENST00000536722 CELF1Q92879 486 aaKnown RBP14.53□□□□□ -0.08
RFX4-205ENST00000536722 NEXNQ0ZGT2 675 aa14.52□□□□□ -0.09
RFX4-205ENST00000536722 PSMD1Q99460 953 aa14.52□□□□□ -0.09
RFX4-205ENST00000536722 SEC31BQ9NQW1 1179 aa14.52□□□□□ -0.09
RFX4-205ENST00000536722 ZNF277Q9NRM2 450 aaPredicted RBP14.52□□□□□ -0.09
RFX4-205ENST00000536722 ATP6V0A2Q9Y487 856 aa14.52□□□□□ -0.09
RFX4-205ENST00000536722 ZC3H4Q9UPT8 1303 aaKnown RBP14.51□□□□□ -0.09
RFX4-205ENST00000536722 PDE8AO60658 829 aa14.51□□□□□ -0.09
RFX4-205ENST00000536722 DDX46Q7L014 1031 aaKnown RBP14.51□□□□□ -0.09
RFX4-205ENST00000536722 UBE3BQ7Z3V4 1068 aa14.51□□□□□ -0.09
RFX4-205ENST00000536722 RTKN2Q8IZC4 609 aa14.51□□□□□ -0.09
RFX4-205ENST00000536722 WDR90Q96KV7 1748 aa14.5□□□□□ -0.09
RFX4-205ENST00000536722 KIF3CO14782 793 aa14.5□□□□□ -0.09
RFX4-205ENST00000536722 ABCB7O75027 752 aa14.5□□□□□ -0.09
RFX4-205ENST00000536722 BBOX1O75936 387 aa14.5□□□□□ -0.09
RFX4-205ENST00000536722 ALDH1L2Q3SY69 923 aa14.5□□□□□ -0.09
RFX4-205ENST00000536722 CC2D2BQ6DHV5 1058 aa14.5□□□□□ -0.09
RFX4-205ENST00000536722 SP8Q8IXZ3 490 aa14.5□□□□□ -0.09
RFX4-205ENST00000536722 GPBP1L1Q9HC44 474 aaPredicted RBP14.5□□□□□ -0.09
RFX4-205ENST00000536722 NMRK2Q9NPI5 230 aa14.5□□□□□ -0.09
RFX4-205ENST00000536722 A0A1B0GUL6 1792 aa14.5□□□□□ -0.09
RFX4-205ENST00000536722 CT47B1P0C2W7 299 aaPredicted RBP14.49□□□□□ -0.09
RFX4-205ENST00000536722 CTSWP56202 376 aa14.49□□□□□ -0.09
RFX4-205ENST00000536722 TTLL11Q8NHH1 800 aa14.49□□□□□ -0.09
RFX4-205ENST00000536722 CCDC85AQ96PX6 553 aaPredicted RBP14.49□□□□□ -0.09
RFX4-205ENST00000536722 PLA2G12BQ9BX93 195 aa14.49□□□□□ -0.09
RFX4-205ENST00000536722 PTPRCP08575 1304 aa14.48□□□□□ -0.09
RFX4-205ENST00000536722 ZBED9Q6R2W3 1325 aa14.48□□□□□ -0.09
RFX4-205ENST00000536722 IARSP41252 1262 aaKnown RBP14.48□□□□□ -0.09
RFX4-205ENST00000536722 RARSP54136 660 aaKnown RBP14.48□□□□□ -0.09
RFX4-205ENST00000536722 BRPF1P55201 1214 aaPredicted RBP14.48□□□□□ -0.09
RFX4-205ENST00000536722 RTFDC1Q9BY42 306 aaPredicted RBP14.48□□□□□ -0.09
RFX4-205ENST00000536722 GREM2Q9H772 168 aa14.48□□□□□ -0.09
RFX4-205ENST00000536722 RTL9Q8NET4 1388 aa14.47□□□□□ -0.09
RFX4-205ENST00000536722 ZNF541Q9H0D2 1346 aa14.47□□□□□ -0.09
RFX4-205ENST00000536722 GLTPD2A6NH11 291 aa14.47□□□□□ -0.09
RFX4-205ENST00000536722 POTECB2RU33 542 aa14.47□□□□□ -0.09
RFX4-205ENST00000536722 DSG3P32926 999 aa14.47□□□□□ -0.09
RFX4-205ENST00000536722 FOXO4P98177 505 aa14.47□□□□□ -0.09
RFX4-205ENST00000536722 CCDC152Q4G0S7 254 aa14.47□□□□□ -0.09
RFX4-205ENST00000536722 EPHA10Q5JZY3 1008 aa14.47□□□□□ -0.09
RFX4-205ENST00000536722 SLC4A10Q6U841 1118 aa14.47□□□□□ -0.09
RFX4-205ENST00000536722 SMC4Q9NTJ3 1288 aa14.47□□□□□ -0.09
RFX4-205ENST00000536722 SCN9AQ15858 1988 aa14.46□□□□□ -0.09
RFX4-205ENST00000536722 GRM8O00222 908 aa14.46□□□□□ -0.09
RFX4-205ENST00000536722 ALDH1L1O75891 902 aa14.46□□□□□ -0.09
RFX4-205ENST00000536722 CSF1RP07333 972 aa14.46□□□□□ -0.09
RFX4-205ENST00000536722 RPS8P62241 208 aaKnown RBP14.46□□□□□ -0.09
RFX4-205ENST00000536722 GRIPAP1Q4V328 841 aa14.46□□□□□ -0.09
RFX4-205ENST00000536722 KAZALD1Q96I82 304 aa14.46□□□□□ -0.09
RFX4-205ENST00000536722 UTYO14607 1347 aa14.45□□□□□ -0.1
RFX4-205ENST00000536722 FZD9O00144 591 aa14.45□□□□□ -0.1
RFX4-205ENST00000536722 HSP90B1P14625 803 aaKnown RBP14.45□□□□□ -0.1
RFX4-205ENST00000536722 GPSM2P81274 684 aa14.45□□□□□ -0.1
RFX4-205ENST00000536722 FAM161AQ3B820 660 aa14.45□□□□□ -0.1
RFX4-205ENST00000536722 TMC4Q7Z404 712 aa14.45□□□□□ -0.1
RFX4-205ENST00000536722 SRCIN1Q9C0H9 1055 aa14.45□□□□□ -0.1
RFX4-205ENST00000536722 SCN4AP35499 1836 aa14.44□□□□□ -0.1
RFX4-205ENST00000536722 DDNO94850 711 aaPredicted RBP14.44□□□□□ -0.1
RFX4-205ENST00000536722 NBPF7P0C2Y1 421 aaPredicted RBP14.44□□□□□ -0.1
RFX4-205ENST00000536722 AOC3Q16853 763 aa14.44□□□□□ -0.1
RFX4-205ENST00000536722 DPP8Q6V1X1 898 aaPredicted RBP14.44□□□□□ -0.1
RFX4-205ENST00000536722 MPNDQ8N594 471 aa14.44□□□□□ -0.1
RFX4-205ENST00000536722 RRAGCQ9HB90 399 aa14.44□□□□□ -0.1
RFX4-205ENST00000536722 POLLQ9UGP5 575 aa14.44□□□□□ -0.1
RFX4-205ENST00000536722 NOB1Q9ULX3 412 aaKnown RBP14.44□□□□□ -0.1
RFX4-205ENST00000536722 KDM2BQ8NHM5 1336 aa14.43□□□□□ -0.1
RFX4-205ENST00000536722 ZNF646O15015 1829 aaPredicted RBP14.43□□□□□ -0.1
RFX4-205ENST00000536722 WTIPA6NIX2 430 aaPredicted RBP14.43□□□□□ -0.1
RFX4-205ENST00000536722 BCAR3O75815 825 aa14.43□□□□□ -0.1
RFX4-205ENST00000536722 SUCLG2Q96I99 432 aa14.43□□□□□ -0.1
RFX4-205ENST00000536722 GPR101Q96P66 508 aaPredicted RBP14.43□□□□□ -0.1
RFX4-205ENST00000536722 TNNQ9UQP3 1299 aa14.43□□□□□ -0.1
RFX4-205ENST00000536722 PSME4Q14997 1843 aa14.43□□□□□ -0.1
RFX4-205ENST00000536722 PPIP5K2O43314 1243 aa14.42□□□□□ -0.1
RFX4-205ENST00000536722 ITGA6P23229 1130 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms