RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 XYLBO75191 536 aa10.04□□□□□ -0.8
CLIP1-207ENST00000536634 SASH3O75995 380 aa10.04□□□□□ -0.8
CLIP1-207ENST00000536634 ABL1P00519 1130 aa10.04□□□□□ -0.8
CLIP1-207ENST00000536634 AMPD1P23109 780 aa10.04□□□□□ -0.8
CLIP1-207ENST00000536634 TARSP26639 723 aaKnown RBP10.04□□□□□ -0.8
CLIP1-207ENST00000536634 GSK3AP49840 483 aa10.04□□□□□ -0.8
CLIP1-207ENST00000536634 MARSP56192 900 aaKnown RBP10.04□□□□□ -0.8
CLIP1-207ENST00000536634 CHSY3Q70JA7 882 aa10.04□□□□□ -0.8
CLIP1-207ENST00000536634 GPR152Q8TDT2 470 aa10.04□□□□□ -0.8
CLIP1-207ENST00000536634 LAMC3Q9Y6N6 1575 aa10.04□□□□□ -0.8
CLIP1-207ENST00000536634 BAZ1BQ9UIG0 1483 aaKnown RBP10.04□□□□□ -0.8
CLIP1-207ENST00000536634 SERPINB4P48594 390 aa10.03□□□□□ -0.8
CLIP1-207ENST00000536634 TBC1D8BQ0IIM8 1120 aa10.03□□□□□ -0.8
CLIP1-207ENST00000536634 IGFLR1Q9H665 355 aa10.03□□□□□ -0.8
CLIP1-207ENST00000536634 CNTNAP5Q8WYK1 1306 aa10.03□□□□□ -0.8
CLIP1-207ENST00000536634 EGFRP00533 1210 aa10.02□□□□□ -0.81
CLIP1-207ENST00000536634 ADH7P40394 386 aa10.02□□□□□ -0.81
CLIP1-207ENST00000536634 EIF1AXP47813 144 aaKnown RBP10.02□□□□□ -0.81
CLIP1-207ENST00000536634 PDE4CQ08493 712 aa10.02□□□□□ -0.81
CLIP1-207ENST00000536634 RRAGCQ9HB90 399 aa10.02□□□□□ -0.81
CLIP1-207ENST00000536634 C11orf16Q9NQ32 467 aa10.02□□□□□ -0.81
CLIP1-207ENST00000536634 MTMR7Q9Y216 660 aa10.02□□□□□ -0.81
CLIP1-207ENST00000536634 PIK3R5Q8WYR1 880 aa10.01□□□□□ -0.81
CLIP1-207ENST00000536634 UBE2OQ9C0C9 1292 aaKnown RBP10.01□□□□□ -0.81
CLIP1-207ENST00000536634 EFCC1Q9HA90 598 aa10.01□□□□□ -0.81
CLIP1-207ENST00000536634 RARAP10276 462 aa10□□□□□ -0.81
CLIP1-207ENST00000536634 NPR3P17342 541 aa10□□□□□ -0.81
CLIP1-207ENST00000536634 ARID4AP29374 1257 aaPredicted RBP10□□□□□ -0.81
CLIP1-207ENST00000536634 NOM1Q5C9Z4 860 aaKnown RBP10□□□□□ -0.81
CLIP1-207ENST00000536634 TXNDC2Q86VQ3 553 aa10□□□□□ -0.81
CLIP1-207ENST00000536634 DNAJB12Q9NXW2 375 aaKnown RBP10□□□□□ -0.81
CLIP1-207ENST00000536634 STARD13Q9Y3M8 1113 aa10□□□□□ -0.81
CLIP1-207ENST00000536634 UBAP1LF5GYI3 381 aa9.99□□□□□ -0.81
CLIP1-207ENST00000536634 MAP3K6O95382 1288 aa9.99□□□□□ -0.81
CLIP1-207ENST00000536634 DGKGP49619 791 aa9.99□□□□□ -0.81
CLIP1-207ENST00000536634 EDEM1Q92611 657 aa9.99□□□□□ -0.81
CLIP1-207ENST00000536634 NUDT16Q96DE0 195 aaKnown RBP9.99□□□□□ -0.81
CLIP1-207ENST00000536634 FAM13BQ9NYF5 915 aa9.99□□□□□ -0.81
CLIP1-207ENST00000536634 SLC6A14Q9UN76 642 aa9.99□□□□□ -0.81
CLIP1-207ENST00000536634 PEG3Q9GZU2 1588 aa9.99□□□□□ -0.81
CLIP1-207ENST00000536634 ALAS2P22557 587 aa9.98□□□□□ -0.81
CLIP1-207ENST00000536634 FKBP4Q02790 459 aaKnown RBP eCLIP9.98□□□□□ -0.81
CLIP1-207ENST00000536634 LINC00114Q6XXX2 140 aa9.98□□□□□ -0.81
CLIP1-207ENST00000536634 DHX32Q7L7V1 743 aaKnown RBP9.98□□□□□ -0.81
CLIP1-207ENST00000536634 SCARF2Q96GP6 870 aaPredicted RBP9.98□□□□□ -0.81
CLIP1-207ENST00000536634 PDS5BQ9NTI5 1447 aa9.98□□□□□ -0.81
CLIP1-207ENST00000536634 ZBTB42B2RXF5 422 aa9.97□□□□□ -0.81
CLIP1-207ENST00000536634 IRS1P35568 1242 aa9.97□□□□□ -0.81
CLIP1-207ENST00000536634 DNM1Q05193 864 aaKnown RBP9.97□□□□□ -0.81
CLIP1-207ENST00000536634 SF3B2Q13435 895 aaKnown RBP9.97□□□□□ -0.81
CLIP1-207ENST00000536634 TMEM151AQ8N4L1 468 aa9.97□□□□□ -0.81
CLIP1-207ENST00000536634 EGFL7Q9UHF1 273 aa9.97□□□□□ -0.81
CLIP1-207ENST00000536634 NAGPAQ9UK23 515 aa9.97□□□□□ -0.81
CLIP1-207ENST00000536634 BAZ1AQ9NRL2 1556 aaPredicted RBP9.97□□□□□ -0.81
CLIP1-207ENST00000536634 H3BRB1 525 aa9.96□□□□□ -0.82
CLIP1-207ENST00000536634 ICMTO60725 284 aa9.96□□□□□ -0.82
CLIP1-207ENST00000536634 MMP20O60882 483 aa9.96□□□□□ -0.82
CLIP1-207ENST00000536634 ALBP02768 609 aa9.96□□□□□ -0.82
CLIP1-207ENST00000536634 PDGFAP04085 211 aa9.96□□□□□ -0.82
CLIP1-207ENST00000536634 MLLT1Q03111 559 aaPredicted RBP9.96□□□□□ -0.82
CLIP1-207ENST00000536634 PODNQ7Z5L7 613 aa9.96□□□□□ -0.82
CLIP1-207ENST00000536634 NLRP13Q86W25 1043 aa9.96□□□□□ -0.82
CLIP1-207ENST00000536634 BEND7Q8N7W2 519 aaPredicted RBP9.96□□□□□ -0.82
CLIP1-207ENST00000536634 TUT1Q9H6E5 874 aaKnown RBP9.96□□□□□ -0.82
CLIP1-207ENST00000536634 FAM13AO94988 1023 aa9.95□□□□□ -0.82
CLIP1-207ENST00000536634 BRD1O95696 1058 aa9.95□□□□□ -0.82
CLIP1-207ENST00000536634 ECM1Q16610 540 aa9.95□□□□□ -0.82
CLIP1-207ENST00000536634 C8orf86Q6ZUL3 223 aa9.95□□□□□ -0.82
CLIP1-207ENST00000536634 WDR62O43379 1518 aa9.95□□□□□ -0.82
CLIP1-207ENST00000536634 MRC2Q9UBG0 1479 aa9.94□□□□□ -0.82
CLIP1-207ENST00000536634 A6NHS1 94 aa9.94□□□□□ -0.82
CLIP1-207ENST00000536634 M0R082 166 aa9.94□□□□□ -0.82
CLIP1-207ENST00000536634 FZD6O60353 706 aa9.94□□□□□ -0.82
CLIP1-207ENST00000536634 ZNF417Q8TAU3 575 aa9.94□□□□□ -0.82
CLIP1-207ENST00000536634 TRPM4Q8TD43 1214 aa9.94□□□□□ -0.82
CLIP1-207ENST00000536634 ZNF587Q96SQ5 575 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-207ENST00000536634 GGNBP2Q9H3C7 697 aa9.94□□□□□ -0.82
CLIP1-207ENST00000536634 TLR7Q9NYK1 1049 aaKnown RBP9.94□□□□□ -0.82
CLIP1-207ENST00000536634 MKL2Q9ULH7 1088 aa9.94□□□□□ -0.82
CLIP1-207ENST00000536634 POLIQ9UNA4 740 aa9.94□□□□□ -0.82
CLIP1-207ENST00000536634 RNF225M0QZC1 329 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-207ENST00000536634 GDF11O95390 407 aa9.93□□□□□ -0.82
CLIP1-207ENST00000536634 MZF1P28698 734 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-207ENST00000536634 ALKBH2Q6NS38 261 aa9.93□□□□□ -0.82
CLIP1-207ENST00000536634 KANK3Q6NY19 840 aa9.93□□□□□ -0.82
CLIP1-207ENST00000536634 C20orf204Q6ZNR8 217 aa9.93□□□□□ -0.82
CLIP1-207ENST00000536634 MICALL1Q8N3F8 863 aa9.93□□□□□ -0.82
CLIP1-207ENST00000536634 SUV39H2Q9H5I1 410 aa9.93□□□□□ -0.82
CLIP1-207ENST00000536634 CCDC87Q9NVE4 849 aa9.93□□□□□ -0.82
CLIP1-207ENST00000536634 FNDC3AQ9Y2H6 1198 aaKnown RBP9.93□□□□□ -0.82
CLIP1-207ENST00000536634 PHF20L1A8MW92 1017 aa9.92□□□□□ -0.82
CLIP1-207ENST00000536634 CPB1P15086 417 aa9.92□□□□□ -0.82
CLIP1-207ENST00000536634 GPLD1P80108 840 aa9.92□□□□□ -0.82
CLIP1-207ENST00000536634 AAMPQ13685 434 aa9.92□□□□□ -0.82
CLIP1-207ENST00000536634 HFE2Q6ZVN8 426 aa9.92□□□□□ -0.82
CLIP1-207ENST00000536634 FAM35AQ86V20 835 aa9.92□□□□□ -0.82
CLIP1-207ENST00000536634 GLYCTKQ8IVS8 523 aa9.92□□□□□ -0.82
CLIP1-207ENST00000536634 TMEM63CQ9P1W3 806 aa9.92□□□□□ -0.82
CLIP1-207ENST00000536634 NRLP54845 237 aa9.91□□□□□ -0.82
CLIP1-207ENST00000536634 RASSF7Q02833 373 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms