RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 AKTIPQ9H8T0 292 aa6.15□□□□□ -1.42
SKA3-207ENST00000536239 ZFATQ9P243 1243 aa6.15□□□□□ -1.42
SKA3-207ENST00000536239 TARSP26639 723 aaKnown RBP6.14□□□□□ -1.43
SKA3-207ENST00000536239 FMNL2Q96PY5 1086 aa6.14□□□□□ -1.43
SKA3-207ENST00000536239 UCN2Q96RP3 112 aa6.14□□□□□ -1.43
SKA3-207ENST00000536239 ALX3O95076 343 aa6.13□□□□□ -1.43
SKA3-207ENST00000536239 INPP5BP32019 993 aa6.13□□□□□ -1.43
SKA3-207ENST00000536239 CD97P48960 835 aa6.13□□□□□ -1.43
SKA3-207ENST00000536239 GPLD1P80108 840 aa6.13□□□□□ -1.43
SKA3-207ENST00000536239 MLLT1Q03111 559 aaPredicted RBP6.13□□□□□ -1.43
SKA3-207ENST00000536239 KRT25Q7Z3Z0 450 aa6.13□□□□□ -1.43
SKA3-207ENST00000536239 TMEM130Q8N3G9 435 aa6.13□□□□□ -1.43
SKA3-207ENST00000536239 IFT43Q96FT9 208 aa6.13□□□□□ -1.43
SKA3-207ENST00000536239 POM121Q96HA1 1249 aa6.13□□□□□ -1.43
SKA3-207ENST00000536239 SMG9Q9H0W8 520 aaKnown RBP6.13□□□□□ -1.43
SKA3-207ENST00000536239 C11orf16Q9NQ32 467 aa6.13□□□□□ -1.43
SKA3-207ENST00000536239 POM121CA8CG34 1229 aa6.12□□□□□ -1.43
SKA3-207ENST00000536239 IDH3AP50213 366 aa6.12□□□□□ -1.43
SKA3-207ENST00000536239 HDGFL1Q5TGJ6 251 aa6.12□□□□□ -1.43
SKA3-207ENST00000536239 MRPL18Q9H0U6 180 aaKnown RBP6.12□□□□□ -1.43
SKA3-207ENST00000536239 F8W735 103 aaPredicted RBP6.11□□□□□ -1.43
SKA3-207ENST00000536239 SASH3O75995 380 aa6.11□□□□□ -1.43
SKA3-207ENST00000536239 RARAP10276 462 aa6.11□□□□□ -1.43
SKA3-207ENST00000536239 YBX3P16989 372 aaKnown RBP eCLIP6.11□□□□□ -1.43
SKA3-207ENST00000536239 IRAK1P51617 712 aa6.11□□□□□ -1.43
SKA3-207ENST00000536239 SEC13P55735 322 aa6.11□□□□□ -1.43
SKA3-207ENST00000536239 HFE2Q6ZVN8 426 aa6.11□□□□□ -1.43
SKA3-207ENST00000536239 ARSDP51689 593 aa6.1□□□□□ -1.43
SKA3-207ENST00000536239 NRLP54845 237 aa6.1□□□□□ -1.43
SKA3-207ENST00000536239 HINFPQ9BQA5 517 aa6.1□□□□□ -1.43
SKA3-207ENST00000536239 COBLO75128 1261 aa6.09□□□□□ -1.43
SKA3-207ENST00000536239 MED26O95402 600 aa6.09□□□□□ -1.43
SKA3-207ENST00000536239 TAL1P17542 331 aaPredicted RBP6.09□□□□□ -1.43
SKA3-207ENST00000536239 EIF2AK2P19525 551 aaKnown RBP6.09□□□□□ -1.43
SKA3-207ENST00000536239 RASA1P20936 1047 aa6.09□□□□□ -1.43
SKA3-207ENST00000536239 ARID4AP29374 1257 aaPredicted RBP6.09□□□□□ -1.43
SKA3-207ENST00000536239 KLK14Q9P0G3 267 aa6.09□□□□□ -1.43
SKA3-207ENST00000536239 KIAA1324LA8MWY0 1029 aaPredicted RBP6.08□□□□□ -1.44
SKA3-207ENST00000536239 GSC2O15499 205 aa6.08□□□□□ -1.44
SKA3-207ENST00000536239 RAD21O60216 631 aa6.08□□□□□ -1.44
SKA3-207ENST00000536239 PTCD1O75127 700 aaKnown RBP6.08□□□□□ -1.44
SKA3-207ENST00000536239 IGFBP4P22692 258 aa6.08□□□□□ -1.44
SKA3-207ENST00000536239 Q6ZS46 218 aa6.08□□□□□ -1.44
SKA3-207ENST00000536239 PLD4Q96BZ4 506 aa6.08□□□□□ -1.44
SKA3-207ENST00000536239 SRA1Q9HD15 236 aaKnown RBP6.08□□□□□ -1.44
SKA3-207ENST00000536239 TLR7Q9NYK1 1049 aaKnown RBP6.08□□□□□ -1.44
SKA3-207ENST00000536239 RAXQ9Y2V3 346 aa6.08□□□□□ -1.44
SKA3-207ENST00000536239 OAS3Q9Y6K5 1087 aaKnown RBP6.08□□□□□ -1.44
SKA3-207ENST00000536239 LOC102724428A0A0B4J2F2 783 aa6.07□□□□□ -1.44
SKA3-207ENST00000536239 MICAL2O94851 1124 aa6.07□□□□□ -1.44
SKA3-207ENST00000536239 IGLV1-40P01703 118 aa6.07□□□□□ -1.44
SKA3-207ENST00000536239 GP2P55259 537 aaKnown RBP6.07□□□□□ -1.44
SKA3-207ENST00000536239 SIK1P57059 783 aa6.07□□□□□ -1.44
SKA3-207ENST00000536239 DGKZQ13574 1117 aa6.07□□□□□ -1.44
SKA3-207ENST00000536239 SETDB1Q15047 1291 aa6.07□□□□□ -1.44
SKA3-207ENST00000536239 IL22RA1Q8N6P7 574 aa6.07□□□□□ -1.44
SKA3-207ENST00000536239 J3QW42 95 aa6.06□□□□□ -1.44
SKA3-207ENST00000536239 LGR5O75473 907 aa6.06□□□□□ -1.44
SKA3-207ENST00000536239 EGFRP00533 1210 aa6.06□□□□□ -1.44
SKA3-207ENST00000536239 TGFB1P01137 390 aa6.06□□□□□ -1.44
SKA3-207ENST00000536239 GLB1P16278 677 aa6.06□□□□□ -1.44
SKA3-207ENST00000536239 GDF6Q6KF10 455 aaPredicted RBP6.06□□□□□ -1.44
SKA3-207ENST00000536239 MAP4K3Q8IVH8 894 aa6.06□□□□□ -1.44
SKA3-207ENST00000536239 AGGF1Q8N302 714 aaeCLIP6.06□□□□□ -1.44
SKA3-207ENST00000536239 DCAF11Q8TEB1 546 aa6.06□□□□□ -1.44
SKA3-207ENST00000536239 OPLAHO14841 1288 aa6.05□□□□□ -1.44
SKA3-207ENST00000536239 C11orf91Q3C1V1 193 aa6.05□□□□□ -1.44
SKA3-207ENST00000536239 UBL7Q96S82 380 aaPredicted RBP6.05□□□□□ -1.44
SKA3-207ENST00000536239 QTRT2Q9H974 415 aaKnown RBP6.05□□□□□ -1.44
SKA3-207ENST00000536239 STOML1Q9UBI4 398 aa6.05□□□□□ -1.44
SKA3-207ENST00000536239 RTCBQ9Y3I0 505 aaKnown RBP6.05□□□□□ -1.44
SKA3-207ENST00000536239 RNF114Q9Y508 228 aa6.05□□□□□ -1.44
SKA3-207ENST00000536239 GHRHP01286 108 aa6.04□□□□□ -1.44
SKA3-207ENST00000536239 PSAPP07602 524 aa6.04□□□□□ -1.44
SKA3-207ENST00000536239 DPYDQ12882 1025 aa6.04□□□□□ -1.44
SKA3-207ENST00000536239 LARP1Q6PKG0 1096 aaKnown RBP6.04□□□□□ -1.44
SKA3-207ENST00000536239 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.04□□□□□ -1.44
SKA3-207ENST00000536239 TFIP11Q9UBB9 837 aaKnown RBP6.04□□□□□ -1.44
SKA3-207ENST00000536239 USP20Q9Y2K6 914 aa6.04□□□□□ -1.44
SKA3-207ENST00000536239 DHX15O43143 795 aaKnown RBP6.03□□□□□ -1.44
SKA3-207ENST00000536239 XYLBO75191 536 aa6.03□□□□□ -1.44
SKA3-207ENST00000536239 PTK7Q13308 1070 aa6.03□□□□□ -1.44
SKA3-207ENST00000536239 ZDHHC13Q8IUH4 622 aa6.03□□□□□ -1.44
SKA3-207ENST00000536239 MYO19Q96H55 970 aa6.03□□□□□ -1.44
SKA3-207ENST00000536239 RBSNQ9H1K0 784 aa6.03□□□□□ -1.44
SKA3-207ENST00000536239 MMP20O60882 483 aa6.02□□□□□ -1.45
SKA3-207ENST00000536239 ADAMTS4O75173 837 aa6.02□□□□□ -1.45
SKA3-207ENST00000536239 HOXD8P13378 290 aaPredicted RBP6.02□□□□□ -1.45
SKA3-207ENST00000536239 CRTC2Q53ET0 693 aaPredicted RBP6.02□□□□□ -1.45
SKA3-207ENST00000536239 INTS5Q6P9B9 1019 aaKnown RBP6.02□□□□□ -1.45
SKA3-207ENST00000536239 CMTR1Q8N1G2 835 aaKnown RBP6.02□□□□□ -1.45
SKA3-207ENST00000536239 CACTIN-AS1Q8N1I8 211 aa6.02□□□□□ -1.45
SKA3-207ENST00000536239 ARMC10Q8N2F6 343 aa6.02□□□□□ -1.45
SKA3-207ENST00000536239 NSUN5Q96P11 429 aaKnown RBP6.02□□□□□ -1.45
SKA3-207ENST00000536239 MUC3BQ9H195 1237 aa6.02□□□□□ -1.45
SKA3-207ENST00000536239 MAFBQ9Y5Q3 323 aaPredicted RBP6.02□□□□□ -1.45
SKA3-207ENST00000536239 ARID1BQ8NFD5 2236 aaPredicted RBP6.01□□□□□ -1.45
SKA3-207ENST00000536239 FOXO3O43524 673 aa6.01□□□□□ -1.45
SKA3-207ENST00000536239 UBTFP17480 764 aaKnown RBP6.01□□□□□ -1.45
SKA3-207ENST00000536239 SPINK2P20155 84 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms