RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 GPR101Q96P66 508 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1A-207ENST00000535958 LAS1LQ9Y4W2 734 aaKnown RBP16.94■□□□□ 0.3
TNFRSF1A-207ENST00000535958 THSD7BQ9C0I4 1608 aa16.93■□□□□ 0.3
TNFRSF1A-207ENST00000535958 LAMB2P55268 1798 aa16.93■□□□□ 0.3
TNFRSF1A-207ENST00000535958 TMPOP42166 694 aaKnown RBP16.93■□□□□ 0.3
TNFRSF1A-207ENST00000535958 CXCL9Q07325 125 aa16.93■□□□□ 0.3
TNFRSF1A-207ENST00000535958 GRAPQ13588 217 aa16.93■□□□□ 0.3
TNFRSF1A-207ENST00000535958 NEUROD2Q15784 382 aa16.93■□□□□ 0.3
TNFRSF1A-207ENST00000535958 TMC4Q7Z404 712 aa16.93■□□□□ 0.3
TNFRSF1A-207ENST00000535958 LRP10Q7Z4F1 713 aa16.93■□□□□ 0.3
TNFRSF1A-207ENST00000535958 GRAPLQ8TC17 118 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1A-207ENST00000535958 RTFDC1Q9BY42 306 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1A-207ENST00000535958 TLL2Q9Y6L7 1015 aa16.93■□□□□ 0.3
TNFRSF1A-207ENST00000535958 CELF2O95319 508 aaKnown RBP16.92■□□□□ 0.3
TNFRSF1A-207ENST00000535958 FMR1Q06787 632 aaKnown RBP eCLIP16.92■□□□□ 0.3
TNFRSF1A-207ENST00000535958 KIAA2012Q0VF49 1180 aa16.92■□□□□ 0.3
TNFRSF1A-207ENST00000535958 TCIRG1Q13488 830 aa16.92■□□□□ 0.3
TNFRSF1A-207ENST00000535958 ZNF408Q9H9D4 720 aa16.92■□□□□ 0.3
TNFRSF1A-207ENST00000535958 RAD17O75943 681 aa16.91■□□□□ 0.3
TNFRSF1A-207ENST00000535958 WDR43Q15061 677 aaKnown RBP eCLIP16.91■□□□□ 0.3
TNFRSF1A-207ENST00000535958 H7C1D1 291 aa16.9■□□□□ 0.3
TNFRSF1A-207ENST00000535958 HDGFL1Q5TGJ6 251 aa16.9■□□□□ 0.3
TNFRSF1A-207ENST00000535958 CCDC146Q8IYE0 955 aa16.9■□□□□ 0.3
TNFRSF1A-207ENST00000535958 ABHD8Q96I13 439 aa16.9■□□□□ 0.3
TNFRSF1A-207ENST00000535958 MAP2K2P36507 400 aa16.89■□□□□ 0.29
TNFRSF1A-207ENST00000535958 CST9Q5W186 159 aa16.89■□□□□ 0.29
TNFRSF1A-207ENST00000535958 ZC3H15Q8WU90 426 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1A-207ENST00000535958 GLIS2Q9BZE0 524 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1A-207ENST00000535958 CHPF2Q9P2E5 772 aa16.89■□□□□ 0.29
TNFRSF1A-207ENST00000535958 CDC37L1Q7L3B6 337 aa16.88■□□□□ 0.29
TNFRSF1A-207ENST00000535958 MYBBP1AQ9BQG0 1328 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1A-207ENST00000535958 CA12O43570 354 aa16.87■□□□□ 0.29
TNFRSF1A-207ENST00000535958 AOC2O75106 756 aa16.87■□□□□ 0.29
TNFRSF1A-207ENST00000535958 WASHC4Q2M389 1173 aa16.87■□□□□ 0.29
TNFRSF1A-207ENST00000535958 SAPCD2Q86UD0 394 aa16.87■□□□□ 0.29
TNFRSF1A-207ENST00000535958 PLBD2Q8NHP8 589 aa16.87■□□□□ 0.29
TNFRSF1A-207ENST00000535958 ZNF428Q96B54 188 aa16.87■□□□□ 0.29
TNFRSF1A-207ENST00000535958 DBF4Q9UBU7 674 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1A-207ENST00000535958 CNOT7Q9UIV1 285 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1A-207ENST00000535958 NSFL1CQ9UNZ2 370 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1A-207ENST00000535958 C6orf229H3BNL8 230 aa16.86■□□□□ 0.29
TNFRSF1A-207ENST00000535958 HOXB7P09629 217 aa16.86■□□□□ 0.29
TNFRSF1A-207ENST00000535958 KRT24Q2M2I5 525 aa16.86■□□□□ 0.29
TNFRSF1A-207ENST00000535958 ANKRD13DQ6ZTN6 518 aa16.86■□□□□ 0.29
TNFRSF1A-207ENST00000535958 MICALL2Q8IY33 904 aa16.86■□□□□ 0.29
TNFRSF1A-207ENST00000535958 TRPM4Q8TD43 1214 aa16.86■□□□□ 0.29
TNFRSF1A-207ENST00000535958 RUNDC1Q96C34 613 aa16.86■□□□□ 0.29
TNFRSF1A-207ENST00000535958 HHIPL1Q96JK4 782 aa16.86■□□□□ 0.29
TNFRSF1A-207ENST00000535958 EYA3Q99504 573 aa16.86■□□□□ 0.29
TNFRSF1A-207ENST00000535958 LRRC37AA6NMS7 1700 aa16.86■□□□□ 0.29
TNFRSF1A-207ENST00000535958 DDX60Q8IY21 1712 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1A-207ENST00000535958 CHL1O00533 1208 aa16.85■□□□□ 0.29
TNFRSF1A-207ENST00000535958 FAM89AQ96GI7 184 aa16.85■□□□□ 0.29
TNFRSF1A-207ENST00000535958 HYPKQ9NX55 129 aa16.85■□□□□ 0.29
TNFRSF1A-207ENST00000535958 TSKSQ9UJT2 592 aa16.85■□□□□ 0.29
TNFRSF1A-207ENST00000535958 DUOX1Q9NRD9 1551 aa16.85■□□□□ 0.29
TNFRSF1A-207ENST00000535958 CCDC85CA6NKD9 419 aa16.84■□□□□ 0.29
TNFRSF1A-207ENST00000535958 ATP5J2-PTCD1G3V325 749 aa16.84■□□□□ 0.29
TNFRSF1A-207ENST00000535958 G3V3G9 751 aa16.84■□□□□ 0.29
TNFRSF1A-207ENST00000535958 RIMBP2O15034 1052 aa16.84■□□□□ 0.29
TNFRSF1A-207ENST00000535958 HSP90B1P14625 803 aaKnown RBP16.84■□□□□ 0.29
TNFRSF1A-207ENST00000535958 GOLGA2Q08379 1002 aa16.84■□□□□ 0.29
TNFRSF1A-207ENST00000535958 RTL5Q5HYW3 569 aaPredicted RBP16.84■□□□□ 0.29
TNFRSF1A-207ENST00000535958 DCAF8Q5TAQ9 597 aa16.84■□□□□ 0.29
TNFRSF1A-207ENST00000535958 DBNDD1Q9H9R9 158 aa16.84■□□□□ 0.29
TNFRSF1A-207ENST00000535958 TAF1P21675 1872 aa16.84■□□□□ 0.29
TNFRSF1A-207ENST00000535958 YDJCA8MPS7 323 aa16.83■□□□□ 0.28
TNFRSF1A-207ENST00000535958 PSMD14O00487 310 aa16.83■□□□□ 0.28
TNFRSF1A-207ENST00000535958 BRPF1P55201 1214 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1A-207ENST00000535958 DPF2Q92785 391 aa16.83■□□□□ 0.28
TNFRSF1A-207ENST00000535958 CELF1Q92879 486 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1A-207ENST00000535958 CFAP44Q96MT7 982 aa16.83■□□□□ 0.28
TNFRSF1A-207ENST00000535958 PGAP2Q9UHJ9 254 aa16.83■□□□□ 0.28
TNFRSF1A-207ENST00000535958 ZBTB12Q9Y330 459 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1A-207ENST00000535958 ECE2O60344 883 aa16.82■□□□□ 0.28
TNFRSF1A-207ENST00000535958 RPS12P25398 132 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1A-207ENST00000535958 HIRAP54198 1017 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1A-207ENST00000535958 HUNKP57058 714 aa16.82■□□□□ 0.28
TNFRSF1A-207ENST00000535958 NOGQ13253 232 aa16.82■□□□□ 0.28
TNFRSF1A-207ENST00000535958 SF3B3Q15393 1217 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1A-207ENST00000535958 RIC3Q7Z5B4 369 aa16.82■□□□□ 0.28
TNFRSF1A-207ENST00000535958 USP48Q86UV5 1035 aa16.82■□□□□ 0.28
TNFRSF1A-207ENST00000535958 DCPSQ96C86 337 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1A-207ENST00000535958 ISCA1Q9BUE6 129 aa16.82■□□□□ 0.28
TNFRSF1A-207ENST00000535958 IRS4O14654 1257 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF1A-207ENST00000535958 FAM161AQ3B820 660 aa16.81■□□□□ 0.28
TNFRSF1A-207ENST00000535958 TBC1D10BQ4KMP7 808 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF1A-207ENST00000535958 KRT26Q7Z3Y9 468 aa16.81■□□□□ 0.28
TNFRSF1A-207ENST00000535958 TRIM35Q9UPQ4 493 aa16.81■□□□□ 0.28
TNFRSF1A-207ENST00000535958 SHTN1A0MZ66 631 aa16.8■□□□□ 0.28
TNFRSF1A-207ENST00000535958 GPSM2P81274 684 aa16.8■□□□□ 0.28
TNFRSF1A-207ENST00000535958 DOK7Q18PE1 504 aa16.8■□□□□ 0.28
TNFRSF1A-207ENST00000535958 RBM26Q5T8P6 1007 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1A-207ENST00000535958 DUSP27Q5VZP5 1158 aa16.8■□□□□ 0.28
TNFRSF1A-207ENST00000535958 SAMD7Q7Z3H4 446 aa16.8■□□□□ 0.28
TNFRSF1A-207ENST00000535958 C2orf69Q8N8R5 385 aa16.8■□□□□ 0.28
TNFRSF1A-207ENST00000535958 ZC3H12CQ9C0D7 883 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1A-207ENST00000535958 ANKIB1Q9P2G1 1089 aa16.8■□□□□ 0.28
TNFRSF1A-207ENST00000535958 CALD1Q05682 793 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1A-207ENST00000535958 DDX10Q13206 875 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms