RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 TFIP11Q9UBB9 837 aaKnown RBP10.89□□□□□ -0.67
TNC-210ENST00000535648 SAMM50Q9Y512 469 aa10.89□□□□□ -0.67
TNC-210ENST00000535648 UQCRFS1P1P0C7P4 283 aa10.89□□□□□ -0.67
TNC-210ENST00000535648 LDHAL6AQ6ZMR3 332 aa10.89□□□□□ -0.67
TNC-210ENST00000535648 MICU3Q86XE3 530 aa10.89□□□□□ -0.67
TNC-210ENST00000535648 KRT222Q8N1A0 295 aa10.89□□□□□ -0.67
TNC-210ENST00000535648 ERMNQ8TAM6 284 aa10.89□□□□□ -0.67
TNC-210ENST00000535648 WWC3Q9ULE0 1092 aa10.89□□□□□ -0.67
TNC-210ENST00000535648 IKBKGQ9Y6K9 419 aa10.89□□□□□ -0.67
TNC-210ENST00000535648 TBCAO75347 108 aaKnown RBP10.89□□□□□ -0.67
TNC-210ENST00000535648 C6orf163Q5TEZ5 329 aa10.89□□□□□ -0.67
TNC-210ENST00000535648 SREK1Q8WXA9 508 aaKnown RBP10.89□□□□□ -0.67
TNC-210ENST00000535648 PHF8Q9UPP1 1060 aa10.89□□□□□ -0.67
TNC-210ENST00000535648 IL16Q14005 1332 aa10.89□□□□□ -0.67
TNC-210ENST00000535648 C6orf229H3BNL8 230 aa10.89□□□□□ -0.67
TNC-210ENST00000535648 VAT1LQ9HCJ6 419 aa10.89□□□□□ -0.67
TNC-210ENST00000535648 EXOC5O00471 708 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 GPTP24298 496 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 ACTN2P35609 894 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 PUF60Q9UHX1 559 aaKnown RBP10.88□□□□□ -0.67
TNC-210ENST00000535648 LMAN1P49257 510 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 TRIM47Q96LD4 638 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 CD109Q6YHK3 1445 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 PABPN1LA6NDY0 278 aaKnown RBP10.88□□□□□ -0.67
TNC-210ENST00000535648 NBPF7P0C2Y1 421 aaPredicted RBP10.88□□□□□ -0.67
TNC-210ENST00000535648 CCDC155Q8N6L0 562 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 LRRC45Q96CN5 670 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 SYKP43405 635 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 USP37Q86T82 979 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 BICD1Q96G01 975 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 LARP6Q9BRS8 491 aaKnown RBP10.88□□□□□ -0.67
TNC-210ENST00000535648 EMILIN1Q9Y6C2 1016 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 ITSN2Q9NZM3 1697 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 KIAA0753Q2KHM9 967 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 CA8P35219 290 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 BMS1Q14692 1282 aaKnown RBP10.88□□□□□ -0.67
TNC-210ENST00000535648 TICAM2Q86XR7 235 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 IFNL2Q8IZJ0 200 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 TMTC2Q8N394 836 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 SNX21Q969T3 373 aa10.88□□□□□ -0.67
TNC-210ENST00000535648 RALGAPBQ86X10 1494 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 STAT6P42226 847 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 WTAPQ15007 396 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 CNNM2Q9H8M5 875 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 ABCC5O15440 1437 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 ST5P78524 1137 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 ZGPATQ8N5A5 531 aaKnown RBP10.87□□□□□ -0.67
TNC-210ENST00000535648 SELENOOQ9BVL4 669 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 ZBTB3Q9H5J0 574 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 TRAF1Q13077 416 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 KCNG4Q8TDN1 519 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 GDPD2Q9HCC8 539 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 MYO1BO43795 1136 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 ZFYP08048 801 aaPredicted RBP10.87□□□□□ -0.67
TNC-210ENST00000535648 UBASH3AP57075 661 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 CCDC152Q4G0S7 254 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 N4BP3O15049 544 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 ZSCAN22P10073 491 aaPredicted RBP10.87□□□□□ -0.67
TNC-210ENST00000535648 CYLC1P35663 651 aaPredicted RBP10.87□□□□□ -0.67
TNC-210ENST00000535648 IRX3P78415 501 aaPredicted RBP10.87□□□□□ -0.67
TNC-210ENST00000535648 RRAGDQ9NQL2 400 aaPredicted RBP10.87□□□□□ -0.67
TNC-210ENST00000535648 HAND2P61296 217 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 ZSCAN23Q3MJ62 389 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 IFIT1BQ5T764 474 aaKnown RBP10.87□□□□□ -0.67
TNC-210ENST00000535648 ISM2Q6H9L7 571 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 RASAL2Q9UJF2 1139 aa10.87□□□□□ -0.67
TNC-210ENST00000535648 PPP1R14CQ8TAE6 165 aa10.86□□□□□ -0.67
TNC-210ENST00000535648 ANKRD36BQ8N2N9 1353 aa10.86□□□□□ -0.67
TNC-210ENST00000535648 GNG11P61952 73 aa10.86□□□□□ -0.67
TNC-210ENST00000535648 LRSAM1Q6UWE0 723 aa10.86□□□□□ -0.67
TNC-210ENST00000535648 SPATA24Q86W54 205 aa10.86□□□□□ -0.67
TNC-210ENST00000535648 A0A1W2PRG0 241 aa10.86□□□□□ -0.67
TNC-210ENST00000535648 TSPY3P0CV98 308 aa10.86□□□□□ -0.67
TNC-210ENST00000535648 TSPY8P0CW00 308 aa10.86□□□□□ -0.67
TNC-210ENST00000535648 PRPHP41219 470 aa10.86□□□□□ -0.67
TNC-210ENST00000535648 AMOTL2Q9Y2J4 779 aa10.86□□□□□ -0.67
TNC-210ENST00000535648 UBE3BQ7Z3V4 1068 aa10.86□□□□□ -0.67
TNC-210ENST00000535648 SNRPA1P09661 255 aaKnown RBP10.86□□□□□ -0.67
TNC-210ENST00000535648 SSX2IPQ9Y2D8 614 aa10.86□□□□□ -0.67
TNC-210ENST00000535648 SYNCQ9H7C4 482 aa10.86□□□□□ -0.67
TNC-210ENST00000535648 NUCB1Q02818 461 aa10.85□□□□□ -0.67
TNC-210ENST00000535648 C8orf34Q49A92 452 aa10.85□□□□□ -0.67
TNC-210ENST00000535648 ZBTB43O43298 467 aa10.85□□□□□ -0.67
TNC-210ENST00000535648 PANK2Q9BZ23 570 aa10.85□□□□□ -0.67
TNC-210ENST00000535648 NSRP1Q9H0G5 558 aaKnown RBP10.85□□□□□ -0.67
TNC-210ENST00000535648 MBIPQ9NS73 344 aa10.85□□□□□ -0.67
TNC-210ENST00000535648 RNF123Q5XPI4 1314 aa10.85□□□□□ -0.67
TNC-210ENST00000535648 ADAMTS2O95450 1211 aa10.85□□□□□ -0.67
TNC-210ENST00000535648 RBM27Q9P2N5 1060 aaKnown RBP10.85□□□□□ -0.67
TNC-210ENST00000535648 TUBB4AP04350 444 aa10.85□□□□□ -0.67
TNC-210ENST00000535648 RRAGBQ5VZM2 374 aa10.85□□□□□ -0.67
TNC-210ENST00000535648 GTF2F1P35269 517 aaKnown RBP eCLIP10.85□□□□□ -0.67
TNC-210ENST00000535648 AKR1B10O60218 316 aa10.84□□□□□ -0.67
TNC-210ENST00000535648 RFC4P35249 363 aa10.84□□□□□ -0.67
TNC-210ENST00000535648 RTN1Q16799 776 aa10.84□□□□□ -0.67
TNC-210ENST00000535648 ESR2Q92731 530 aa10.84□□□□□ -0.67
TNC-210ENST00000535648 PI4KAP2A4QPH2 592 aa10.84□□□□□ -0.67
TNC-210ENST00000535648 ATP5J2-PTCD1G3V325 749 aa10.84□□□□□ -0.67
TNC-210ENST00000535648 KRT13P13646 458 aa10.84□□□□□ -0.67
TNC-210ENST00000535648 GNAQP50148 359 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms