RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 IFIT2P09913 472 aaKnown RBP25.69■■□□□ 1.7
PDXDC1-205ENST00000535621 EN1Q05925 392 aaPredicted RBP25.69■■□□□ 1.7
PDXDC1-205ENST00000535621 RGPD4Q7Z3J3 1758 aa25.69■■□□□ 1.7
PDXDC1-205ENST00000535621 AACSQ86V21 672 aa25.69■■□□□ 1.7
PDXDC1-205ENST00000535621 ZPR1O75312 459 aa25.68■■□□□ 1.7
PDXDC1-205ENST00000535621 ZNF652Q9Y2D9 606 aa25.68■■□□□ 1.7
PDXDC1-205ENST00000535621 DDX60Q8IY21 1712 aaKnown RBP25.67■■□□□ 1.7
PDXDC1-205ENST00000535621 RFC4P35249 363 aa25.67■■□□□ 1.7
PDXDC1-205ENST00000535621 EZH2Q15910 746 aaKnown RBP25.67■■□□□ 1.7
PDXDC1-205ENST00000535621 CASC1Q6TDU7 716 aa25.67■■□□□ 1.7
PDXDC1-205ENST00000535621 CSF1RP07333 972 aa25.66■■□□□ 1.7
PDXDC1-205ENST00000535621 CLEC4GQ6UXB4 293 aa25.66■■□□□ 1.7
PDXDC1-205ENST00000535621 TRIM6-TRIM34B2RNG4 842 aa25.66■■□□□ 1.7
PDXDC1-205ENST00000535621 ECHDC1Q9NTX5 307 aa25.66■■□□□ 1.7
PDXDC1-205ENST00000535621 CASZ1Q86V15 1759 aa25.65■■□□□ 1.7
PDXDC1-205ENST00000535621 IRS4O14654 1257 aaPredicted RBP25.65■■□□□ 1.7
PDXDC1-205ENST00000535621 EIF5BO60841 1220 aaKnown RBP25.65■■□□□ 1.7
PDXDC1-205ENST00000535621 NTSR2O95665 410 aa25.65■■□□□ 1.7
PDXDC1-205ENST00000535621 GLRX3O76003 335 aaKnown RBP25.64■■□□□ 1.7
PDXDC1-205ENST00000535621 HCLS1P14317 486 aaPredicted RBP25.64■■□□□ 1.7
PDXDC1-205ENST00000535621 RBM25P49756 843 aaKnown RBP25.64■■□□□ 1.7
PDXDC1-205ENST00000535621 TFCP2Q12800 502 aa25.64■■□□□ 1.7
PDXDC1-205ENST00000535621 ATG9AQ7Z3C6 839 aa25.64■■□□□ 1.7
PDXDC1-205ENST00000535621 RILPL2Q969X0 211 aa25.64■■□□□ 1.7
PDXDC1-205ENST00000535621 GPATCH3Q96I76 525 aa25.64■■□□□ 1.7
PDXDC1-205ENST00000535621 UTP14AQ9BVJ6 771 aaKnown RBP25.64■■□□□ 1.7
PDXDC1-205ENST00000535621 COL24A1Q17RW2 1714 aa25.64■■□□□ 1.7
PDXDC1-205ENST00000535621 ERC2O15083 957 aa25.64■■□□□ 1.69
PDXDC1-205ENST00000535621 AKT1S1Q96B36 256 aa25.64■■□□□ 1.69
PDXDC1-205ENST00000535621 CCDC8Q9H0W5 538 aaPredicted RBP25.64■■□□□ 1.69
PDXDC1-205ENST00000535621 CCDC57Q2TAC2 916 aa25.63■■□□□ 1.69
PDXDC1-205ENST00000535621 DEFB132Q7Z7B7 95 aa25.63■■□□□ 1.69
PDXDC1-205ENST00000535621 PARP10Q53GL7 1025 aa25.63■■□□□ 1.69
PDXDC1-205ENST00000535621 ZNF594Q96JF6 807 aaPredicted RBP25.63■■□□□ 1.69
PDXDC1-205ENST00000535621 CAMKK2Q96RR4 588 aa25.63■■□□□ 1.69
PDXDC1-205ENST00000535621 TLR7Q9NYK1 1049 aaKnown RBP25.63■■□□□ 1.69
PDXDC1-205ENST00000535621 TTLL11Q8NHH1 800 aa25.62■■□□□ 1.69
PDXDC1-205ENST00000535621 TFCP2L1Q9NZI6 479 aa25.62■■□□□ 1.69
PDXDC1-205ENST00000535621 SH3TC1Q8TE82 1336 aa25.62■■□□□ 1.69
PDXDC1-205ENST00000535621 EYA2O00167 538 aa25.61■■□□□ 1.69
PDXDC1-205ENST00000535621 CIAO1O76071 339 aa25.61■■□□□ 1.69
PDXDC1-205ENST00000535621 CTSWP56202 376 aa25.61■■□□□ 1.69
PDXDC1-205ENST00000535621 TNNI3KQ59H18 835 aa25.61■■□□□ 1.69
PDXDC1-205ENST00000535621 FPGT-TNNI3KV9GXZ4 949 aa25.61■■□□□ 1.69
PDXDC1-205ENST00000535621 LAMB2P55268 1798 aa25.61■■□□□ 1.69
PDXDC1-205ENST00000535621 AK9Q5TCS8 1911 aa25.61■■□□□ 1.69
PDXDC1-205ENST00000535621 ADRA2BP18089 450 aa25.61■■□□□ 1.69
PDXDC1-205ENST00000535621 SSFA2P28290 1259 aa25.61■■□□□ 1.69
PDXDC1-205ENST00000535621 IL15P40933 162 aaPredicted RBP25.61■■□□□ 1.69
PDXDC1-205ENST00000535621 CCDC24Q8N4L8 307 aa25.61■■□□□ 1.69
PDXDC1-205ENST00000535621 MAP4K4O95819 1239 aaPredicted RBP25.6■■□□□ 1.69
PDXDC1-205ENST00000535621 PDE8AO60658 829 aa25.59■■□□□ 1.69
PDXDC1-205ENST00000535621 CHMLP26374 656 aa25.59■■□□□ 1.69
PDXDC1-205ENST00000535621 IFIT5Q13325 482 aaKnown RBP25.59■■□□□ 1.69
PDXDC1-205ENST00000535621 ERFEQ4G0M1 354 aa25.59■■□□□ 1.69
PDXDC1-205ENST00000535621 LRRC24Q50LG9 513 aa25.59■■□□□ 1.69
PDXDC1-205ENST00000535621 ANO8Q9HCE9 1232 aaPredicted RBP25.59■■□□□ 1.69
PDXDC1-205ENST00000535621 RGL2O15211 777 aa25.59■■□□□ 1.69
PDXDC1-205ENST00000535621 GREM2Q9H772 168 aa25.59■■□□□ 1.69
PDXDC1-205ENST00000535621 GYS1P13807 737 aa25.58■■□□□ 1.69
PDXDC1-205ENST00000535621 CNTROBQ8N137 903 aa25.58■■□□□ 1.69
PDXDC1-205ENST00000535621 SETDB2Q96T68 719 aa25.58■■□□□ 1.69
PDXDC1-205ENST00000535621 DBNLQ9UJU6 430 aaKnown RBP25.58■■□□□ 1.69
PDXDC1-205ENST00000535621 FBXO3Q9UK99 471 aa25.58■■□□□ 1.69
PDXDC1-205ENST00000535621 NFIXQ14938 502 aa25.58■■□□□ 1.68
PDXDC1-205ENST00000535621 COL23A1Q86Y22 540 aaPredicted RBP25.58■■□□□ 1.68
PDXDC1-205ENST00000535621 PUS3Q9BZE2 481 aaKnown RBP25.58■■□□□ 1.68
PDXDC1-205ENST00000535621 TAF1P21675 1872 aa25.57■■□□□ 1.68
PDXDC1-205ENST00000535621 ABCC12Q96J65 1359 aa25.57■■□□□ 1.68
PDXDC1-205ENST00000535621 C3orf67Q6ZVT6 689 aa25.57■■□□□ 1.68
PDXDC1-205ENST00000535621 COL4A1P02462 1669 aa25.56■■□□□ 1.68
PDXDC1-205ENST00000535621 USP26Q9BXU7 913 aa25.56■■□□□ 1.68
PDXDC1-205ENST00000535621 GPR108Q9NPR9 543 aa25.56■■□□□ 1.68
PDXDC1-205ENST00000535621 ITGA6P23229 1130 aa25.56■■□□□ 1.68
PDXDC1-205ENST00000535621 ESYT1Q9BSJ8 1104 aa25.56■■□□□ 1.68
PDXDC1-205ENST00000535621 REC8O95072 547 aa25.55■■□□□ 1.68
PDXDC1-205ENST00000535621 SPEF2Q9C093 1822 aa25.55■■□□□ 1.68
PDXDC1-205ENST00000535621 TAF7LQ5H9L4 462 aa25.54■■□□□ 1.68
PDXDC1-205ENST00000535621 NBPF5PQ86XG9 351 aaPredicted RBP25.54■■□□□ 1.68
PDXDC1-205ENST00000535621 SLC4A3P48751 1232 aa25.53■■□□□ 1.68
PDXDC1-205ENST00000535621 KIF2CQ99661 725 aa25.53■■□□□ 1.68
PDXDC1-205ENST00000535621 PNPLA7Q6ZV29 1317 aa25.53■■□□□ 1.68
PDXDC1-205ENST00000535621 TNRC6CQ9HCJ0 1690 aaKnown RBP25.53■■□□□ 1.68
PDXDC1-205ENST00000535621 ANKRD18BA2A2Z9 1011 aa25.53■■□□□ 1.68
PDXDC1-205ENST00000535621 SF3B2Q13435 895 aaKnown RBP25.53■■□□□ 1.68
PDXDC1-205ENST00000535621 DBNDD2Q9BQY9 259 aa25.53■■□□□ 1.68
PDXDC1-205ENST00000535621 EVI5LQ96CN4 794 aa25.52■■□□□ 1.68
PDXDC1-205ENST00000535621 ZNF609O15014 1411 aa25.51■■□□□ 1.67
PDXDC1-205ENST00000535621 ATP5JP18859 108 aa25.51■■□□□ 1.67
PDXDC1-205ENST00000535621 BAG6P46379 1132 aa25.51■■□□□ 1.67
PDXDC1-205ENST00000535621 SEC31BQ9NQW1 1179 aa25.51■■□□□ 1.67
PDXDC1-205ENST00000535621 CEP126Q9P2H0 1117 aa25.51■■□□□ 1.67
PDXDC1-205ENST00000535621 GTF2E1P29083 439 aaPredicted RBP25.51■■□□□ 1.67
PDXDC1-205ENST00000535621 BOLA2Q9H3K6 86 aa25.51■■□□□ 1.67
PDXDC1-205ENST00000535621 DAXXQ9UER7 740 aaPredicted RBP25.51■■□□□ 1.67
PDXDC1-205ENST00000535621 RIPOR2Q9Y4F9 1068 aa25.5■■□□□ 1.67
PDXDC1-205ENST00000535621 CARMIL3Q8ND23 1372 aa25.5■■□□□ 1.67
PDXDC1-205ENST00000535621 HSP90B1P14625 803 aaKnown RBP25.49■■□□□ 1.67
PDXDC1-205ENST00000535621 TIMM10P62072 90 aa25.49■■□□□ 1.67
PDXDC1-205ENST00000535621 DDR1Q08345 913 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms