RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 DBF4Q9UBU7 674 aaPredicted RBP16.48■□□□□ 0.23
LPCAT3-203ENST00000535479 PHF8Q9UPP1 1060 aa16.48■□□□□ 0.23
LPCAT3-203ENST00000535479 XRN1Q8IZH2 1706 aaKnown RBP16.48■□□□□ 0.23
LPCAT3-203ENST00000535479 SPATA31D1Q6ZQQ2 1576 aa16.47■□□□□ 0.23
LPCAT3-203ENST00000535479 TTC21AQ8NDW8 1320 aa16.47■□□□□ 0.23
LPCAT3-203ENST00000535479 TIMM10P62072 90 aa16.47■□□□□ 0.23
LPCAT3-203ENST00000535479 EVI5LQ96CN4 794 aa16.47■□□□□ 0.23
LPCAT3-203ENST00000535479 ZNF594Q96JF6 807 aaPredicted RBP16.47■□□□□ 0.23
LPCAT3-203ENST00000535479 PXDNQ92626 1479 aa16.47■□□□□ 0.23
LPCAT3-203ENST00000535479 RNMTO43148 476 aaKnown RBP16.46■□□□□ 0.23
LPCAT3-203ENST00000535479 ZNF165P49910 485 aa16.46■□□□□ 0.23
LPCAT3-203ENST00000535479 HSP90AA4PQ58FG1 418 aa16.46■□□□□ 0.23
LPCAT3-203ENST00000535479 TTLL5Q6EMB2 1281 aa16.46■□□□□ 0.23
LPCAT3-203ENST00000535479 FAM184AQ8NB25 1140 aa16.46■□□□□ 0.23
LPCAT3-203ENST00000535479 TMEM87AQ8NBN3 555 aa16.46■□□□□ 0.23
LPCAT3-203ENST00000535479 CACTINQ8WUQ7 758 aaKnown RBP16.46■□□□□ 0.23
LPCAT3-203ENST00000535479 DBNLQ9UJU6 430 aaKnown RBP16.46■□□□□ 0.23
LPCAT3-203ENST00000535479 ATP6V1DQ9Y5K8 247 aa16.46■□□□□ 0.23
LPCAT3-203ENST00000535479 SSH2Q76I76 1423 aa16.46■□□□□ 0.23
LPCAT3-203ENST00000535479 KSR2Q6VAB6 950 aa16.46■□□□□ 0.23
LPCAT3-203ENST00000535479 PDCL2Q8N4E4 241 aa16.46■□□□□ 0.23
LPCAT3-203ENST00000535479 MAP4K1Q92918 833 aa16.46■□□□□ 0.23
LPCAT3-203ENST00000535479 GPATCH3Q96I76 525 aa16.46■□□□□ 0.23
LPCAT3-203ENST00000535479 CCDC94Q9BW85 323 aaPredicted RBP16.46■□□□□ 0.22
LPCAT3-203ENST00000535479 RPS6KB1P23443 525 aa16.45■□□□□ 0.22
LPCAT3-203ENST00000535479 CHRNA2Q15822 529 aa16.45■□□□□ 0.22
LPCAT3-203ENST00000535479 FAM200AQ8TCP9 573 aa16.45■□□□□ 0.22
LPCAT3-203ENST00000535479 NLRP2Q9NX02 1062 aa16.45■□□□□ 0.22
LPCAT3-203ENST00000535479 CLIP2Q9UDT6 1046 aa16.45■□□□□ 0.22
LPCAT3-203ENST00000535479 STOX1Q6ZVD7 989 aa16.45■□□□□ 0.22
LPCAT3-203ENST00000535479 TMX1Q9H3N1 280 aa16.45■□□□□ 0.22
LPCAT3-203ENST00000535479 GOLPH3LQ9H4A5 285 aa16.45■□□□□ 0.22
LPCAT3-203ENST00000535479 GOLIM4O00461 696 aa16.44■□□□□ 0.22
LPCAT3-203ENST00000535479 TPD52L1Q16890 204 aaPredicted RBP16.44■□□□□ 0.22
LPCAT3-203ENST00000535479 ANKRD24Q8TF21 1146 aa16.44■□□□□ 0.22
LPCAT3-203ENST00000535479 RGPD1P0DJD0 1748 aa16.44■□□□□ 0.22
LPCAT3-203ENST00000535479 A0A0U1RQG5 324 aaPredicted RBP16.44■□□□□ 0.22
LPCAT3-203ENST00000535479 POLR3DP05423 398 aaPredicted RBP16.44■□□□□ 0.22
LPCAT3-203ENST00000535479 CYP21A2P08686 494 aa16.44■□□□□ 0.22
LPCAT3-203ENST00000535479 FAM208AQ9UK61 1670 aaKnown RBP16.43■□□□□ 0.22
LPCAT3-203ENST00000535479 TNNT1P13805 278 aa16.43■□□□□ 0.22
LPCAT3-203ENST00000535479 GOLGA8FQ08AF8 430 aa16.43■□□□□ 0.22
LPCAT3-203ENST00000535479 GOLGA8DPQ0D2H9 430 aa16.43■□□□□ 0.22
LPCAT3-203ENST00000535479 SCRN1Q12765 414 aa16.43■□□□□ 0.22
LPCAT3-203ENST00000535479 UVSSAQ2YD98 709 aa16.43■□□□□ 0.22
LPCAT3-203ENST00000535479 IP6K1Q92551 441 aa16.43■□□□□ 0.22
LPCAT3-203ENST00000535479 TTC41PQ6P2S7 1318 aa16.43■□□□□ 0.22
LPCAT3-203ENST00000535479 TAF5LO75529 589 aa16.42■□□□□ 0.22
LPCAT3-203ENST00000535479 RXRAP19793 462 aa16.42■□□□□ 0.22
LPCAT3-203ENST00000535479 AOX1Q06278 1338 aa16.42■□□□□ 0.22
LPCAT3-203ENST00000535479 PIK3C2AO00443 1686 aa16.42■□□□□ 0.22
LPCAT3-203ENST00000535479 ZSCAN25Q6NSZ9 544 aa16.42■□□□□ 0.22
LPCAT3-203ENST00000535479 TECPR2O15040 1411 aa16.42■□□□□ 0.22
LPCAT3-203ENST00000535479 TUBGCP6Q96RT7 1819 aa16.42■□□□□ 0.22
LPCAT3-203ENST00000535479 TERF1P54274 439 aa16.42■□□□□ 0.22
LPCAT3-203ENST00000535479 CHAF1AQ13111 956 aaPredicted RBP16.42■□□□□ 0.22
LPCAT3-203ENST00000535479 HSP90AB4PQ58FF6 505 aa16.42■□□□□ 0.22
LPCAT3-203ENST00000535479 ST7Q9NRC1 585 aa16.42■□□□□ 0.22
LPCAT3-203ENST00000535479 A0A1B0GVL5 298 aa16.41■□□□□ 0.22
LPCAT3-203ENST00000535479 HTATSF1O43719 755 aaKnown RBP16.41■□□□□ 0.22
LPCAT3-203ENST00000535479 ZSCAN20P17040 1043 aaPredicted RBP16.41■□□□□ 0.22
LPCAT3-203ENST00000535479 ZNF496Q96IT1 587 aaPredicted RBP16.41■□□□□ 0.22
LPCAT3-203ENST00000535479 DENND2AQ9ULE3 1009 aa16.41■□□□□ 0.22
LPCAT3-203ENST00000535479 SRCAPQ6ZRS2 3230 aa16.41■□□□□ 0.22
LPCAT3-203ENST00000535479 ZNF75DP51815 510 aa16.41■□□□□ 0.22
LPCAT3-203ENST00000535479 PLEKHO1Q53GL0 409 aaPredicted RBP16.41■□□□□ 0.22
LPCAT3-203ENST00000535479 GORABQ5T7V8 394 aa16.41■□□□□ 0.22
LPCAT3-203ENST00000535479 NEK1Q96PY6 1258 aa16.41■□□□□ 0.22
LPCAT3-203ENST00000535479 SH2B1Q9NRF2 756 aaPredicted RBP16.41■□□□□ 0.22
LPCAT3-203ENST00000535479 GCP02774 474 aa16.4■□□□□ 0.22
LPCAT3-203ENST00000535479 ME1P48163 572 aa16.4■□□□□ 0.22
LPCAT3-203ENST00000535479 MAPK8IP2Q13387 824 aaPredicted RBP16.4■□□□□ 0.22
LPCAT3-203ENST00000535479 PDIA6Q15084 440 aa16.4■□□□□ 0.22
LPCAT3-203ENST00000535479 CCAR1Q8IX12 1150 aaKnown RBP16.4■□□□□ 0.22
LPCAT3-203ENST00000535479 SIRT1Q96EB6 747 aa16.4■□□□□ 0.22
LPCAT3-203ENST00000535479 USP28Q96RU2 1077 aa16.4■□□□□ 0.22
LPCAT3-203ENST00000535479 NWD1Q149M9 1564 aa16.4■□□□□ 0.22
LPCAT3-203ENST00000535479 PI16Q6UXB8 463 aa16.4■□□□□ 0.22
LPCAT3-203ENST00000535479 ZSCAN31Q96LW9 406 aaPredicted RBP16.4■□□□□ 0.22
LPCAT3-203ENST00000535479 SPTLC3Q9NUV7 552 aa16.4■□□□□ 0.22
LPCAT3-203ENST00000535479 DIP2BQ9P265 1576 aa16.39■□□□□ 0.22
LPCAT3-203ENST00000535479 AKAP4Q5JQC9 854 aa16.39■□□□□ 0.21
LPCAT3-203ENST00000535479 LRRN4CLQ8ND94 238 aa16.39■□□□□ 0.21
LPCAT3-203ENST00000535479 A0A087WZG4 1122 aa16.39■□□□□ 0.21
LPCAT3-203ENST00000535479 CSB-PGBD3P0DP91 1061 aa16.39■□□□□ 0.21
LPCAT3-203ENST00000535479 NPHP4O75161 1426 aaPredicted RBP16.39■□□□□ 0.21
LPCAT3-203ENST00000535479 NEURL1BA8MQ27 555 aa16.39■□□□□ 0.21
LPCAT3-203ENST00000535479 LETM1O95202 739 aaPredicted RBP16.39■□□□□ 0.21
LPCAT3-203ENST00000535479 NCBP1Q09161 790 aaKnown RBP16.39■□□□□ 0.21
LPCAT3-203ENST00000535479 LMBR1LQ6UX01 489 aa16.39■□□□□ 0.21
LPCAT3-203ENST00000535479 RGPD2P0DJD1 1756 aa16.38■□□□□ 0.21
LPCAT3-203ENST00000535479 FKBP4Q02790 459 aaKnown RBP eCLIP16.38■□□□□ 0.21
LPCAT3-203ENST00000535479 AOPEPQ8N6M6 819 aa16.38■□□□□ 0.21
LPCAT3-203ENST00000535479 LINS1Q8NG48 757 aa16.38■□□□□ 0.21
LPCAT3-203ENST00000535479 PSMA5P28066 241 aa16.38■□□□□ 0.21
LPCAT3-203ENST00000535479 PRIMPOLQ96LW4 560 aa16.38■□□□□ 0.21
LPCAT3-203ENST00000535479 ZBTB3Q9H5J0 574 aa16.38■□□□□ 0.21
LPCAT3-203ENST00000535479 FMN2Q9NZ56 1722 aa16.38■□□□□ 0.21
LPCAT3-203ENST00000535479 PPP6R1Q9UPN7 881 aa16.38■□□□□ 0.21
LPCAT3-203ENST00000535479 CEMIPQ8WUJ3 1361 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms