RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 ABCB7O75027 752 aa12.11□□□□□ -0.47
CDCA3-204ENST00000535406 IARSP41252 1262 aaKnown RBP12.11□□□□□ -0.47
CDCA3-204ENST00000535406 EXOSC9Q06265 439 aaKnown RBP12.11□□□□□ -0.47
CDCA3-204ENST00000535406 ZBTB38Q8NAP3 1195 aaPredicted RBP12.11□□□□□ -0.47
CDCA3-204ENST00000535406 CCDC191Q8NCU4 936 aa12.11□□□□□ -0.47
CDCA3-204ENST00000535406 METTL22Q9BUU2 404 aaPredicted RBP12.11□□□□□ -0.47
CDCA3-204ENST00000535406 PI4KAP2A4QPH2 592 aa12.1□□□□□ -0.47
CDCA3-204ENST00000535406 IRS4O14654 1257 aaPredicted RBP12.1□□□□□ -0.47
CDCA3-204ENST00000535406 HSP90B1P14625 803 aaKnown RBP12.1□□□□□ -0.47
CDCA3-204ENST00000535406 NEXNQ0ZGT2 675 aa12.1□□□□□ -0.47
CDCA3-204ENST00000535406 GRAPQ13588 217 aa12.1□□□□□ -0.47
CDCA3-204ENST00000535406 KSR2Q6VAB6 950 aa12.1□□□□□ -0.47
CDCA3-204ENST00000535406 SLC51AQ86UW1 340 aa12.1□□□□□ -0.47
CDCA3-204ENST00000535406 PI4KAP1Q8N8J0 262 aa12.1□□□□□ -0.47
CDCA3-204ENST00000535406 RBM46Q8TBY0 533 aaKnown RBP12.1□□□□□ -0.47
CDCA3-204ENST00000535406 GRAPLQ8TC17 118 aaPredicted RBP12.1□□□□□ -0.47
CDCA3-204ENST00000535406 CWC25Q9NXE8 425 aaPredicted RBP12.1□□□□□ -0.47
CDCA3-204ENST00000535406 ATP6V0A2Q9Y487 856 aa12.1□□□□□ -0.47
CDCA3-204ENST00000535406 ZNF521Q96K83 1311 aa12.09□□□□□ -0.47
CDCA3-204ENST00000535406 TAF1P21675 1872 aa12.09□□□□□ -0.47
CDCA3-204ENST00000535406 LRRC37AA6NMS7 1700 aa12.09□□□□□ -0.47
CDCA3-204ENST00000535406 CCER2I3L3R5 266 aa12.09□□□□□ -0.47
CDCA3-204ENST00000535406 VAMP4O75379 141 aa12.09□□□□□ -0.47
CDCA3-204ENST00000535406 BBOX1O75936 387 aa12.09□□□□□ -0.47
CDCA3-204ENST00000535406 VEGFAP15692 232 aaPredicted RBP12.09□□□□□ -0.47
CDCA3-204ENST00000535406 FLIIQ13045 1269 aa12.09□□□□□ -0.47
CDCA3-204ENST00000535406 SF3B3Q15393 1217 aaKnown RBP12.09□□□□□ -0.47
CDCA3-204ENST00000535406 SPOCK2Q92563 424 aa12.09□□□□□ -0.47
CDCA3-204ENST00000535406 PCCAP05165 728 aaPredicted RBP12.08□□□□□ -0.48
CDCA3-204ENST00000535406 HSPA6P17066 643 aa12.08□□□□□ -0.48
CDCA3-204ENST00000535406 FKBP5Q13451 457 aaPredicted RBP12.08□□□□□ -0.48
CDCA3-204ENST00000535406 G2E3Q7L622 706 aa12.08□□□□□ -0.48
CDCA3-204ENST00000535406 TMC4Q7Z404 712 aa12.08□□□□□ -0.48
CDCA3-204ENST00000535406 JDP2Q8WYK2 163 aa12.08□□□□□ -0.48
CDCA3-204ENST00000535406 ZNF541Q9H0D2 1346 aa12.07□□□□□ -0.48
CDCA3-204ENST00000535406 COL4A5P29400 1685 aa12.07□□□□□ -0.48
CDCA3-204ENST00000535406 DDNO94850 711 aaPredicted RBP12.07□□□□□ -0.48
CDCA3-204ENST00000535406 IGKV5-2P06315 115 aa12.07□□□□□ -0.48
CDCA3-204ENST00000535406 DPP8Q6V1X1 898 aaPredicted RBP12.07□□□□□ -0.48
CDCA3-204ENST00000535406 SP8Q8IXZ3 490 aa12.07□□□□□ -0.48
CDCA3-204ENST00000535406 LARGE2Q8N3Y3 721 aa12.07□□□□□ -0.48
CDCA3-204ENST00000535406 CEP350Q5VT06 3117 aa12.06□□□□□ -0.48
CDCA3-204ENST00000535406 SCN4AP35499 1836 aa12.06□□□□□ -0.48
CDCA3-204ENST00000535406 MYH3P11055 1940 aa12.06□□□□□ -0.48
CDCA3-204ENST00000535406 DUOX1Q9NRD9 1551 aa12.06□□□□□ -0.48
CDCA3-204ENST00000535406 FZD9O00144 591 aa12.06□□□□□ -0.48
CDCA3-204ENST00000535406 PPIP5K2O43314 1243 aa12.06□□□□□ -0.48
CDCA3-204ENST00000535406 PDE8AO60658 829 aa12.06□□□□□ -0.48
CDCA3-204ENST00000535406 FSTL1Q12841 308 aa12.06□□□□□ -0.48
CDCA3-204ENST00000535406 CWF19L2Q2TBE0 894 aaKnown RBP12.06□□□□□ -0.48
CDCA3-204ENST00000535406 CCDC152Q4G0S7 254 aa12.06□□□□□ -0.48
CDCA3-204ENST00000535406 SMC1BQ8NDV3 1235 aa12.06□□□□□ -0.48
CDCA3-204ENST00000535406 SUPT20HQ8NEM7 779 aa12.06□□□□□ -0.48
CDCA3-204ENST00000535406 CELF1Q92879 486 aaKnown RBP12.06□□□□□ -0.48
CDCA3-204ENST00000535406 COL4A1P02462 1669 aa12.06□□□□□ -0.48
CDCA3-204ENST00000535406 CDHR2Q9BYE9 1310 aa12.06□□□□□ -0.48
CDCA3-204ENST00000535406 IQCA1LA6NCM1 817 aa12.05□□□□□ -0.48
CDCA3-204ENST00000535406 NEURL1BA8MQ27 555 aa12.05□□□□□ -0.48
CDCA3-204ENST00000535406 POTECB2RU33 542 aa12.05□□□□□ -0.48
CDCA3-204ENST00000535406 E9PSI1 815 aa12.05□□□□□ -0.48
CDCA3-204ENST00000535406 EIF6P56537 245 aaKnown RBP12.05□□□□□ -0.48
CDCA3-204ENST00000535406 NIM1KQ8IY84 436 aa12.05□□□□□ -0.48
CDCA3-204ENST00000535406 MPNDQ8N594 471 aa12.05□□□□□ -0.48
CDCA3-204ENST00000535406 DNAAF4Q8WXU2 420 aa12.05□□□□□ -0.48
CDCA3-204ENST00000535406 JARID2Q92833 1246 aaPredicted RBP12.05□□□□□ -0.48
CDCA3-204ENST00000535406 L3MBTL3Q96JM7 780 aaPredicted RBP12.05□□□□□ -0.48
CDCA3-204ENST00000535406 RTFDC1Q9BY42 306 aaPredicted RBP12.05□□□□□ -0.48
CDCA3-204ENST00000535406 VPS33BQ9H267 617 aa12.05□□□□□ -0.48
CDCA3-204ENST00000535406 AOC3Q16853 763 aa12.04□□□□□ -0.48
CDCA3-204ENST00000535406 GPC2Q8N158 579 aa12.04□□□□□ -0.48
CDCA3-204ENST00000535406 LTBP1Q14766 1721 aa12.03□□□□□ -0.48
CDCA3-204ENST00000535406 APLP1P51693 650 aa12.03□□□□□ -0.48
CDCA3-204ENST00000535406 CTSWP56202 376 aa12.03□□□□□ -0.48
CDCA3-204ENST00000535406 RPS8P62241 208 aaKnown RBP12.03□□□□□ -0.48
CDCA3-204ENST00000535406 GCKRQ14397 625 aa12.03□□□□□ -0.48
CDCA3-204ENST00000535406 UBE3BQ7Z3V4 1068 aa12.03□□□□□ -0.48
CDCA3-204ENST00000535406 LINS1Q8NG48 757 aa12.03□□□□□ -0.48
CDCA3-204ENST00000535406 CCDC85AQ96PX6 553 aaPredicted RBP12.03□□□□□ -0.48
CDCA3-204ENST00000535406 SEC31BQ9NQW1 1179 aa12.03□□□□□ -0.48
CDCA3-204ENST00000535406 KIAA2012Q0VF49 1180 aa12.02□□□□□ -0.49
CDCA3-204ENST00000535406 HACL1Q9UJ83 578 aa12.02□□□□□ -0.49
CDCA3-204ENST00000535406 NSFL1CQ9UNZ2 370 aaKnown RBP12.02□□□□□ -0.49
CDCA3-204ENST00000535406 GJA3Q9Y6H8 435 aa12.02□□□□□ -0.49
CDCA3-204ENST00000535406 SPEF2Q9C093 1822 aa12.01□□□□□ -0.49
CDCA3-204ENST00000535406 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
CDCA3-204ENST00000535406 F6X3S4 739 aa12.01□□□□□ -0.49
CDCA3-204ENST00000535406 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
CDCA3-204ENST00000535406 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
CDCA3-204ENST00000535406 DIEXFQ68CQ4 756 aaKnown RBP12.01□□□□□ -0.49
CDCA3-204ENST00000535406 ANKRD18AQ8IVF6 992 aa12.01□□□□□ -0.49
CDCA3-204ENST00000535406 CDC5LQ99459 802 aaKnown RBP12.01□□□□□ -0.49
CDCA3-204ENST00000535406 TAF1DQ9H5J8 278 aaPredicted RBP12.01□□□□□ -0.49
CDCA3-204ENST00000535406 RTL9Q8NET4 1388 aa12□□□□□ -0.49
CDCA3-204ENST00000535406 C6orf229H3BNL8 230 aa12□□□□□ -0.49
CDCA3-204ENST00000535406 H7C1W4 665 aa12□□□□□ -0.49
CDCA3-204ENST00000535406 POTEIP0CG38 1075 aa12□□□□□ -0.49
CDCA3-204ENST00000535406 POTEJP0CG39 1038 aa12□□□□□ -0.49
CDCA3-204ENST00000535406 LMOD1P29536 600 aaPredicted RBP12□□□□□ -0.49
CDCA3-204ENST00000535406 GPSM2P81274 684 aa12□□□□□ -0.49
CDCA3-204ENST00000535406 SLFN5Q08AF3 891 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms