RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 PROCA1Q8NCQ7 364 aaPredicted RBP14.49□□□□□ -0.09
SPG11-203ENST00000535302 PTPRCP08575 1304 aa14.49□□□□□ -0.09
SPG11-203ENST00000535302 PABPN1LA6NDY0 278 aaKnown RBP14.49□□□□□ -0.09
SPG11-203ENST00000535302 BAG4O95429 457 aaKnown RBP14.49□□□□□ -0.09
SPG11-203ENST00000535302 GIMAP6Q6P9H5 292 aa14.49□□□□□ -0.09
SPG11-203ENST00000535302 C8orf37Q96NL8 207 aa14.49□□□□□ -0.09
SPG11-203ENST00000535302 CDC5LQ99459 802 aaKnown RBP14.49□□□□□ -0.09
SPG11-203ENST00000535302 SLC4A4Q9Y6R1 1079 aa14.49□□□□□ -0.09
SPG11-203ENST00000535302 TTC22Q5TAA0 569 aa14.49□□□□□ -0.09
SPG11-203ENST00000535302 PSMC4P43686 418 aa14.49□□□□□ -0.09
SPG11-203ENST00000535302 RBM26Q5T8P6 1007 aaKnown RBP14.49□□□□□ -0.09
SPG11-203ENST00000535302 BRF1Q92994 677 aa14.49□□□□□ -0.09
SPG11-203ENST00000535302 CALML4Q96GE6 196 aa14.49□□□□□ -0.09
SPG11-203ENST00000535302 LRPPRCP42704 1394 aaKnown RBP14.48□□□□□ -0.09
SPG11-203ENST00000535302 IQGAP2Q13576 1575 aa14.48□□□□□ -0.09
SPG11-203ENST00000535302 CYP7A1P22680 504 aa14.48□□□□□ -0.09
SPG11-203ENST00000535302 PLS1Q14651 629 aa14.48□□□□□ -0.09
SPG11-203ENST00000535302 KLF18A0A0U1RQI7 1052 aa14.48□□□□□ -0.09
SPG11-203ENST00000535302 ANKRD13DQ6ZTN6 518 aa14.48□□□□□ -0.09
SPG11-203ENST00000535302 HELBQ8NG08 1087 aaPredicted RBP14.48□□□□□ -0.09
SPG11-203ENST00000535302 CCDC175P0C221 793 aa14.48□□□□□ -0.09
SPG11-203ENST00000535302 COPS6Q7L5N1 327 aa14.48□□□□□ -0.09
SPG11-203ENST00000535302 HEATR3Q7Z4Q2 680 aa14.48□□□□□ -0.09
SPG11-203ENST00000535302 RAB34Q9BZG1 259 aa14.48□□□□□ -0.09
SPG11-203ENST00000535302 ZSCAN12O43309 604 aa14.48□□□□□ -0.09
SPG11-203ENST00000535302 ADCY5O95622 1261 aa14.48□□□□□ -0.09
SPG11-203ENST00000535302 TSPY3P0CV98 308 aa14.48□□□□□ -0.09
SPG11-203ENST00000535302 TSPY8P0CW00 308 aa14.48□□□□□ -0.09
SPG11-203ENST00000535302 PDE4BQ07343 736 aa14.48□□□□□ -0.09
SPG11-203ENST00000535302 NCOA7Q8NI08 942 aa14.48□□□□□ -0.09
SPG11-203ENST00000535302 PPM1EQ8WY54 764 aa14.48□□□□□ -0.09
SPG11-203ENST00000535302 PAFAH1B1P43034 410 aa14.47□□□□□ -0.09
SPG11-203ENST00000535302 ZSCAN30Q86W11 494 aa14.47□□□□□ -0.09
SPG11-203ENST00000535302 SNRPA1P09661 255 aaKnown RBP14.47□□□□□ -0.09
SPG11-203ENST00000535302 PHAXQ9H814 394 aaKnown RBP14.47□□□□□ -0.09
SPG11-203ENST00000535302 CABP5Q9NP86 173 aa14.47□□□□□ -0.09
SPG11-203ENST00000535302 ZBTB21Q9ULJ3 1066 aa14.47□□□□□ -0.09
SPG11-203ENST00000535302 CNPY2Q9Y2B0 182 aa14.47□□□□□ -0.09
SPG11-203ENST00000535302 ST5P78524 1137 aa14.47□□□□□ -0.09
SPG11-203ENST00000535302 VPS36Q86VN1 386 aa14.47□□□□□ -0.09
SPG11-203ENST00000535302 SLF2Q8IX21 1173 aa14.47□□□□□ -0.09
SPG11-203ENST00000535302 YEATS4O95619 227 aa14.47□□□□□ -0.09
SPG11-203ENST00000535302 TTF1Q15361 905 aaPredicted RBP14.47□□□□□ -0.09
SPG11-203ENST00000535302 PPP4R3BQ5MIZ7 849 aa14.47□□□□□ -0.09
SPG11-203ENST00000535302 CCDC63Q8NA47 563 aa14.47□□□□□ -0.09
SPG11-203ENST00000535302 FERP16591 822 aa14.47□□□□□ -0.09
SPG11-203ENST00000535302 RIMBP2O15034 1052 aa14.46□□□□□ -0.09
SPG11-203ENST00000535302 KIF18AQ8NI77 898 aa14.46□□□□□ -0.09
SPG11-203ENST00000535302 TCP11L1Q9NUJ3 509 aa14.46□□□□□ -0.09
SPG11-203ENST00000535302 MARCKSP29966 332 aaPredicted RBP14.46□□□□□ -0.09
SPG11-203ENST00000535302 KRT24Q2M2I5 525 aa14.46□□□□□ -0.09
SPG11-203ENST00000535302 RHPN1Q8TCX5 695 aa14.46□□□□□ -0.09
SPG11-203ENST00000535302 SSX2IPQ9Y2D8 614 aa14.46□□□□□ -0.09
SPG11-203ENST00000535302 ABCC11Q96J66 1382 aa14.46□□□□□ -0.09
SPG11-203ENST00000535302 PIK3R4Q99570 1358 aa14.46□□□□□ -0.09
SPG11-203ENST00000535302 FSD2A1L4K1 749 aa14.46□□□□□ -0.1
SPG11-203ENST00000535302 SDSP20132 328 aa14.46□□□□□ -0.1
SPG11-203ENST00000535302 BAG3O95817 575 aa14.46□□□□□ -0.1
SPG11-203ENST00000535302 MIGA1Q8NAN2 632 aa14.46□□□□□ -0.1
SPG11-203ENST00000535302 C8orf58Q8NAV2 365 aa14.46□□□□□ -0.1
SPG11-203ENST00000535302 CLEC11AQ9Y240 323 aa14.46□□□□□ -0.1
SPG11-203ENST00000535302 USO1O60763 962 aaKnown RBP14.45□□□□□ -0.1
SPG11-203ENST00000535302 SP4Q02446 784 aa14.45□□□□□ -0.1
SPG11-203ENST00000535302 MAP9Q49MG5 647 aa14.45□□□□□ -0.1
SPG11-203ENST00000535302 HLA-DOAP06340 250 aa14.45□□□□□ -0.1
SPG11-203ENST00000535302 RXRAP19793 462 aa14.45□□□□□ -0.1
SPG11-203ENST00000535302 DNMBPQ6XZF7 1577 aa14.45□□□□□ -0.1
SPG11-203ENST00000535302 EHMT1Q9H9B1 1298 aa14.45□□□□□ -0.1
SPG11-203ENST00000535302 BMS1Q14692 1282 aaKnown RBP14.45□□□□□ -0.1
SPG11-203ENST00000535302 WTAPQ15007 396 aa14.45□□□□□ -0.1
SPG11-203ENST00000535302 CCDC152Q4G0S7 254 aa14.45□□□□□ -0.1
SPG11-203ENST00000535302 TSNARE1Q96NA8 513 aa14.44□□□□□ -0.1
SPG11-203ENST00000535302 STX1AQ16623 288 aa14.44□□□□□ -0.1
SPG11-203ENST00000535302 IFIT1BQ5T764 474 aaKnown RBP14.44□□□□□ -0.1
SPG11-203ENST00000535302 ZCRB1Q8TBF4 217 aaKnown RBP14.44□□□□□ -0.1
SPG11-203ENST00000535302 CFAP58Q5T655 872 aa14.44□□□□□ -0.1
SPG11-203ENST00000535302 CRNKL1Q9BZJ0 848 aaKnown RBP14.44□□□□□ -0.1
SPG11-203ENST00000535302 DNAI2Q9GZS0 605 aa14.44□□□□□ -0.1
SPG11-203ENST00000535302 NIP7Q9Y221 180 aaKnown RBP eCLIP14.44□□□□□ -0.1
SPG11-203ENST00000535302 MRVI1Q9Y6F6 885 aa14.44□□□□□ -0.1
SPG11-203ENST00000535302 KIAA0586Q9BVV6 1533 aa14.44□□□□□ -0.1
SPG11-203ENST00000535302 KIF5BP33176 963 aa14.44□□□□□ -0.1
SPG11-203ENST00000535302 UBA7P41226 1012 aa14.44□□□□□ -0.1
SPG11-203ENST00000535302 RRAGBQ5VZM2 374 aa14.44□□□□□ -0.1
SPG11-203ENST00000535302 LMBR1LQ6UX01 489 aa14.44□□□□□ -0.1
SPG11-203ENST00000535302 Q6ZUG5 572 aa14.44□□□□□ -0.1
SPG11-203ENST00000535302 TIGD1Q96MW7 591 aa14.44□□□□□ -0.1
SPG11-203ENST00000535302 FAM160A1Q05DH4 1040 aa14.44□□□□□ -0.1
SPG11-203ENST00000535302 DNAJC21Q5F1R6 531 aaKnown RBP14.44□□□□□ -0.1
SPG11-203ENST00000535302 SETDB2Q96T68 719 aa14.43□□□□□ -0.1
SPG11-203ENST00000535302 VEZTQ9HBM0 779 aa14.43□□□□□ -0.1
SPG11-203ENST00000535302 PLIN2Q99541 437 aa14.43□□□□□ -0.1
SPG11-203ENST00000535302 TTC21BQ7Z4L5 1316 aa14.43□□□□□ -0.1
SPG11-203ENST00000535302 CWF19L2Q2TBE0 894 aaKnown RBP14.43□□□□□ -0.1
SPG11-203ENST00000535302 SMARCC1Q92922 1105 aaPredicted RBP14.43□□□□□ -0.1
SPG11-203ENST00000535302 TMX3Q96JJ7 454 aa14.43□□□□□ -0.1
SPG11-203ENST00000535302 TRIM47Q96LD4 638 aa14.43□□□□□ -0.1
SPG11-203ENST00000535302 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.43□□□□□ -0.1
SPG11-203ENST00000535302 V9GYY5 206 aaPredicted RBP14.43□□□□□ -0.1
SPG11-203ENST00000535302 IKBKGQ9Y6K9 419 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms