RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 CCDC152Q4G0S7 254 aa25.94■■□□□ 1.74
CHFR-209ENST00000535181 DDX46Q7L014 1031 aaKnown RBP25.94■■□□□ 1.74
CHFR-209ENST00000535181 RTL9Q8NET4 1388 aa25.94■■□□□ 1.74
CHFR-209ENST00000535181 SOGA3Q5TF21 947 aa25.93■■□□□ 1.74
CHFR-209ENST00000535181 C7orf43Q8WVR3 580 aa25.93■■□□□ 1.74
CHFR-209ENST00000535181 GRAPQ13588 217 aa25.92■■□□□ 1.74
CHFR-209ENST00000535181 TTLL11Q8NHH1 800 aa25.92■■□□□ 1.74
CHFR-209ENST00000535181 GRAPLQ8TC17 118 aaPredicted RBP25.92■■□□□ 1.74
CHFR-209ENST00000535181 USP44Q9H0E7 712 aa25.92■■□□□ 1.74
CHFR-209ENST00000535181 NBPF7P0C2Y1 421 aaPredicted RBP25.91■■□□□ 1.74
CHFR-209ENST00000535181 BBOX1O75936 387 aa25.9■■□□□ 1.74
CHFR-209ENST00000535181 CSF1RP07333 972 aa25.9■■□□□ 1.74
CHFR-209ENST00000535181 TMC4Q7Z404 712 aa25.9■■□□□ 1.74
CHFR-209ENST00000535181 C21orf2O43822 256 aa25.89■■□□□ 1.74
CHFR-209ENST00000535181 CC2D2BQ6DHV5 1058 aa25.89■■□□□ 1.74
CHFR-209ENST00000535181 TNNQ9UQP3 1299 aa25.89■■□□□ 1.74
CHFR-209ENST00000535181 FER1L6Q2WGJ9 1857 aa25.89■■□□□ 1.73
CHFR-209ENST00000535181 PPEF1O14829 653 aaPredicted RBP25.88■■□□□ 1.73
CHFR-209ENST00000535181 FOXO4P98177 505 aa25.88■■□□□ 1.73
CHFR-209ENST00000535181 DZIP1LQ8IYY4 767 aaKnown RBP25.88■■□□□ 1.73
CHFR-209ENST00000535181 SNED1Q8TER0 1413 aa25.88■■□□□ 1.73
CHFR-209ENST00000535181 MS4A1P11836 297 aa25.87■■□□□ 1.73
CHFR-209ENST00000535181 GRIPAP1Q4V328 841 aa25.87■■□□□ 1.73
CHFR-209ENST00000535181 FTSJ3Q8IY81 847 aaKnown RBP25.87■■□□□ 1.73
CHFR-209ENST00000535181 CLUAP1Q96AJ1 413 aa25.87■■□□□ 1.73
CHFR-209ENST00000535181 LRRC37AA6NMS7 1700 aa25.87■■□□□ 1.73
CHFR-209ENST00000535181 TAF1P21675 1872 aa25.87■■□□□ 1.73
CHFR-209ENST00000535181 CHD4Q14839 1912 aa25.86■■□□□ 1.73
CHFR-209ENST00000535181 CCDC93Q567U6 631 aa25.86■■□□□ 1.73
CHFR-209ENST00000535181 KAZALD1Q96I82 304 aa25.86■■□□□ 1.73
CHFR-209ENST00000535181 SUCLG2Q96I99 432 aa25.86■■□□□ 1.73
CHFR-209ENST00000535181 ATP6V0A2Q9Y487 856 aa25.86■■□□□ 1.73
CHFR-209ENST00000535181 COL4A1P02462 1669 aa25.85■■□□□ 1.73
CHFR-209ENST00000535181 ARHGAP27Q6ZUM4 889 aa25.85■■□□□ 1.73
CHFR-209ENST00000535181 TMEM57Q8N5G2 664 aa25.85■■□□□ 1.73
CHFR-209ENST00000535181 CELF1Q92879 486 aaKnown RBP25.85■■□□□ 1.73
CHFR-209ENST00000535181 GREM2Q9H772 168 aa25.85■■□□□ 1.73
CHFR-209ENST00000535181 HDAC5Q9UQL6 1122 aa25.85■■□□□ 1.73
CHFR-209ENST00000535181 LTBP3Q9NS15 1303 aa25.85■■□□□ 1.73
CHFR-209ENST00000535181 RPS8P62241 208 aaKnown RBP25.84■■□□□ 1.73
CHFR-209ENST00000535181 RABL6Q3YEC7 729 aaPredicted RBP25.84■■□□□ 1.73
CHFR-209ENST00000535181 EPHA10Q5JZY3 1008 aa25.84■■□□□ 1.73
CHFR-209ENST00000535181 SP8Q8IXZ3 490 aa25.84■■□□□ 1.73
CHFR-209ENST00000535181 RTKN2Q8IZC4 609 aa25.84■■□□□ 1.73
CHFR-209ENST00000535181 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.84■■□□□ 1.73
CHFR-209ENST00000535181 CDC5LQ99459 802 aaKnown RBP25.84■■□□□ 1.73
CHFR-209ENST00000535181 SEC31BQ9NQW1 1179 aa25.84■■□□□ 1.73
CHFR-209ENST00000535181 UBTFL1P0CB47 393 aaPredicted RBP25.83■■□□□ 1.73
CHFR-209ENST00000535181 CCDC85AQ96PX6 553 aaPredicted RBP25.83■■□□□ 1.73
CHFR-209ENST00000535181 ZNF219Q9P2Y4 722 aaPredicted RBP25.83■■□□□ 1.73
CHFR-209ENST00000535181 NFKBIEO00221 500 aa25.82■■□□□ 1.72
CHFR-209ENST00000535181 GNAI3P08754 354 aa25.82■■□□□ 1.72
CHFR-209ENST00000535181 RLBP1P12271 317 aa25.82■■□□□ 1.72
CHFR-209ENST00000535181 FAM161AQ3B820 660 aa25.82■■□□□ 1.72
CHFR-209ENST00000535181 LMBR1LQ6UX01 489 aa25.82■■□□□ 1.72
CHFR-209ENST00000535181 MEIS3Q99687 375 aa25.82■■□□□ 1.72
CHFR-209ENST00000535181 ITGA6P23229 1130 aa25.81■■□□□ 1.72
CHFR-209ENST00000535181 ANKRD18AQ8IVF6 992 aa25.81■■□□□ 1.72
CHFR-209ENST00000535181 TMX4Q9H1E5 349 aaPredicted RBP25.81■■□□□ 1.72
CHFR-209ENST00000535181 BICC1Q9H694 974 aaKnown RBP25.81■■□□□ 1.72
CHFR-209ENST00000535181 OLFM4Q6UX06 510 aa25.8■■□□□ 1.72
CHFR-209ENST00000535181 ANKRD44Q8N8A2 993 aa25.8■■□□□ 1.72
CHFR-209ENST00000535181 PSMD1Q99460 953 aa25.8■■□□□ 1.72
CHFR-209ENST00000535181 TAOK3Q9H2K8 898 aa25.8■■□□□ 1.72
CHFR-209ENST00000535181 SBF1O95248 1867 aa25.8■■□□□ 1.72
CHFR-209ENST00000535181 FKBP4Q02790 459 aaKnown RBP eCLIP25.79■■□□□ 1.72
CHFR-209ENST00000535181 IFIT5Q13325 482 aaKnown RBP25.79■■□□□ 1.72
CHFR-209ENST00000535181 ANKRD18BA2A2Z9 1011 aa25.78■■□□□ 1.72
CHFR-209ENST00000535181 PDE3AQ14432 1141 aa25.78■■□□□ 1.72
CHFR-209ENST00000535181 RASSF7Q02833 373 aa25.77■■□□□ 1.72
CHFR-209ENST00000535181 ITPRIPQ8IWB1 547 aa25.77■■□□□ 1.72
CHFR-209ENST00000535181 PANK1Q8TE04 598 aa25.77■■□□□ 1.72
CHFR-209ENST00000535181 BSDC1Q9NW68 430 aaPredicted RBP25.77■■□□□ 1.72
CHFR-209ENST00000535181 LTBP1Q14766 1721 aa25.77■■□□□ 1.72
CHFR-209ENST00000535181 PLIN1O60240 522 aa25.76■■□□□ 1.71
CHFR-209ENST00000535181 LMNB1P20700 586 aa25.76■■□□□ 1.71
CHFR-209ENST00000535181 IGHMBP2P38935 993 aaKnown RBP25.76■■□□□ 1.71
CHFR-209ENST00000535181 CCDC57Q2TAC2 916 aa25.76■■□□□ 1.71
CHFR-209ENST00000535181 RTFDC1Q9BY42 306 aaPredicted RBP25.76■■□□□ 1.71
CHFR-209ENST00000535181 CHMP3Q9Y3E7 222 aa25.76■■□□□ 1.71
CHFR-209ENST00000535181 SPEF2Q9C093 1822 aa25.75■■□□□ 1.71
CHFR-209ENST00000535181 SLC51AQ86UW1 340 aa25.75■■□□□ 1.71
CHFR-209ENST00000535181 LRRFIP2Q9Y608 721 aaKnown RBP25.75■■□□□ 1.71
CHFR-209ENST00000535181 ZBTB7BO15156 539 aaPredicted RBP25.74■■□□□ 1.71
CHFR-209ENST00000535181 MPNDQ8N594 471 aa25.74■■□□□ 1.71
CHFR-209ENST00000535181 DUOX1Q9NRD9 1551 aa25.73■■□□□ 1.71
CHFR-209ENST00000535181 DICER1Q9UPY3 1922 aaKnown RBP25.73■■□□□ 1.71
CHFR-209ENST00000535181 GNAI2P04899 355 aa25.73■■□□□ 1.71
CHFR-209ENST00000535181 PRELPP51888 382 aa25.73■■□□□ 1.71
CHFR-209ENST00000535181 MVPQ14764 893 aaKnown RBP25.73■■□□□ 1.71
CHFR-209ENST00000535181 DPP8Q6V1X1 898 aaPredicted RBP25.73■■□□□ 1.71
CHFR-209ENST00000535181 PODXL2Q9NZ53 605 aa25.73■■□□□ 1.71
CHFR-209ENST00000535181 RRP1P56182 461 aaKnown RBP25.72■■□□□ 1.71
CHFR-209ENST00000535181 SUPT20HQ8NEM7 779 aa25.72■■□□□ 1.71
CHFR-209ENST00000535181 MPHOSPH8Q99549 860 aa25.72■■□□□ 1.71
CHFR-209ENST00000535181 VPS33BQ9H267 617 aa25.72■■□□□ 1.71
CHFR-209ENST00000535181 DDX19BQ9UMR2 479 aa25.72■■□□□ 1.71
CHFR-209ENST00000535181 CCDC88AQ3V6T2 1871 aa25.72■■□□□ 1.71
CHFR-209ENST00000535181 ZC3H4Q9UPT8 1303 aaKnown RBP25.71■■□□□ 1.71
CHFR-209ENST00000535181 MTX1Q13505 466 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms