RNA–Protein interactions for RNA: ENST00000535021.5

LPCAT3-202, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-202ENST00000535021 NYXQ9GZU5 481 aa11.04□□□□□ -0.64
LPCAT3-202ENST00000535021 PDZRN3Q9UPQ7 1066 aa11.04□□□□□ -0.64
LPCAT3-202ENST00000535021 NOP58Q9Y2X3 529 aaKnown RBP11.04□□□□□ -0.64
LPCAT3-202ENST00000535021 NRXN2Q9P2S2 1712 aa11.04□□□□□ -0.64
LPCAT3-202ENST00000535021 RIC1Q4ADV7 1423 aa11.03□□□□□ -0.64
LPCAT3-202ENST00000535021 FAM177BA6PVY3 158 aa11.03□□□□□ -0.64
LPCAT3-202ENST00000535021 PDE8AO60658 829 aa11.03□□□□□ -0.64
LPCAT3-202ENST00000535021 TM4SF1P30408 202 aa11.03□□□□□ -0.64
LPCAT3-202ENST00000535021 CTSWP56202 376 aa11.03□□□□□ -0.64
LPCAT3-202ENST00000535021 NUCB1Q02818 461 aa11.03□□□□□ -0.64
LPCAT3-202ENST00000535021 SLC10A5Q5PT55 438 aa11.03□□□□□ -0.64
LPCAT3-202ENST00000535021 NBPF5PQ86XG9 351 aaPredicted RBP11.03□□□□□ -0.64
LPCAT3-202ENST00000535021 NUTM1Q86Y26 1132 aa11.03□□□□□ -0.64
LPCAT3-202ENST00000535021 COPRSQ9NQ92 184 aa11.03□□□□□ -0.64
LPCAT3-202ENST00000535021 ABCC12Q96J65 1359 aa11.03□□□□□ -0.64
LPCAT3-202ENST00000535021 LRP5O75197 1615 aa11.02□□□□□ -0.64
LPCAT3-202ENST00000535021 SURF6O75683 361 aaKnown RBP11.02□□□□□ -0.65
LPCAT3-202ENST00000535021 HCLS1P14317 486 aaPredicted RBP11.02□□□□□ -0.65
LPCAT3-202ENST00000535021 ERFEQ4G0M1 354 aa11.02□□□□□ -0.65
LPCAT3-202ENST00000535021 HSP90AB4PQ58FF6 505 aa11.02□□□□□ -0.65
LPCAT3-202ENST00000535021 TPTE2Q6XPS3 522 aa11.02□□□□□ -0.65
LPCAT3-202ENST00000535021 NLGN1Q8N2Q7 840 aa11.02□□□□□ -0.65
LPCAT3-202ENST00000535021 TTLL11Q8NHH1 800 aa11.02□□□□□ -0.65
LPCAT3-202ENST00000535021 EXOC6BQ9Y2D4 811 aa11.02□□□□□ -0.65
LPCAT3-202ENST00000535021 RTL9Q8NET4 1388 aa11.02□□□□□ -0.65
LPCAT3-202ENST00000535021 TNRC6CQ9HCJ0 1690 aaKnown RBP11.01□□□□□ -0.65
LPCAT3-202ENST00000535021 POLRMTO00411 1230 aaKnown RBP11.01□□□□□ -0.65
LPCAT3-202ENST00000535021 RAB11FIP3O75154 756 aa11.01□□□□□ -0.65
LPCAT3-202ENST00000535021 PTPN12Q05209 780 aaKnown RBP11.01□□□□□ -0.65
LPCAT3-202ENST00000535021 DDR1Q08345 913 aa11.01□□□□□ -0.65
LPCAT3-202ENST00000535021 FAM161AQ3B820 660 aa11.01□□□□□ -0.65
LPCAT3-202ENST00000535021 ANKRD45Q5TZF3 282 aa11.01□□□□□ -0.65
LPCAT3-202ENST00000535021 CHD1LQ86WJ1 897 aa11.01□□□□□ -0.65
LPCAT3-202ENST00000535021 PA2G4Q9UQ80 394 aaKnown RBP11.01□□□□□ -0.65
LPCAT3-202ENST00000535021 CHMP3Q9Y3E7 222 aa11.01□□□□□ -0.65
LPCAT3-202ENST00000535021 SERPINB2P05120 415 aa11□□□□□ -0.65
LPCAT3-202ENST00000535021 GTF2E1P29083 439 aaPredicted RBP11□□□□□ -0.65
LPCAT3-202ENST00000535021 SF3B3Q15393 1217 aaKnown RBP11□□□□□ -0.65
LPCAT3-202ENST00000535021 PRR5LQ6MZQ0 368 aa11□□□□□ -0.65
LPCAT3-202ENST00000535021 SKAP1Q86WV1 359 aa11□□□□□ -0.65
LPCAT3-202ENST00000535021 CNBD1Q8NA66 436 aa11□□□□□ -0.65
LPCAT3-202ENST00000535021 GREM2Q9H772 168 aa11□□□□□ -0.65
LPCAT3-202ENST00000535021 ITGA6P23229 1130 aa10.99□□□□□ -0.65
LPCAT3-202ENST00000535021 PDE4AP27815 886 aa10.99□□□□□ -0.65
LPCAT3-202ENST00000535021 G3BP1Q13283 466 aaKnown RBP eCLIP10.99□□□□□ -0.65
LPCAT3-202ENST00000535021 IFIT5Q13325 482 aaKnown RBP10.99□□□□□ -0.65
LPCAT3-202ENST00000535021 CCDC57Q2TAC2 916 aa10.99□□□□□ -0.65
LPCAT3-202ENST00000535021 CCDC152Q4G0S7 254 aa10.99□□□□□ -0.65
LPCAT3-202ENST00000535021 ERC1Q8IUD2 1116 aa10.99□□□□□ -0.65
LPCAT3-202ENST00000535021 KLHDC4Q8TBB5 520 aa10.99□□□□□ -0.65
LPCAT3-202ENST00000535021 RHPN1Q8TCX5 695 aa10.99□□□□□ -0.65
LPCAT3-202ENST00000535021 KIF1BPQ96EK5 621 aa10.99□□□□□ -0.65
LPCAT3-202ENST00000535021 LRRCC1Q9C099 1032 aa10.99□□□□□ -0.65
LPCAT3-202ENST00000535021 LNPKQ9C0E8 428 aa10.99□□□□□ -0.65
LPCAT3-202ENST00000535021 FBXO3Q9UK99 471 aa10.99□□□□□ -0.65
LPCAT3-202ENST00000535021 ANKRD18BA2A2Z9 1011 aa10.98□□□□□ -0.65
LPCAT3-202ENST00000535021 APBB1O00213 710 aa10.98□□□□□ -0.65
LPCAT3-202ENST00000535021 SMARCA5O60264 1052 aaPredicted RBP10.98□□□□□ -0.65
LPCAT3-202ENST00000535021 CIAO1O76071 339 aa10.98□□□□□ -0.65
LPCAT3-202ENST00000535021 C3orf67Q6ZVT6 689 aa10.98□□□□□ -0.65
LPCAT3-202ENST00000535021 SLC16A10Q8TF71 515 aa10.98□□□□□ -0.65
LPCAT3-202ENST00000535021 CCDC85AQ96PX6 553 aaPredicted RBP10.98□□□□□ -0.65
LPCAT3-202ENST00000535021 ZBTB47Q9UFB7 747 aaPredicted RBP10.98□□□□□ -0.65
LPCAT3-202ENST00000535021 ANKRD31Q8N7Z5 1873 aa10.98□□□□□ -0.65
LPCAT3-202ENST00000535021 EYA2O00167 538 aa10.97□□□□□ -0.65
LPCAT3-202ENST00000535021 SASH1O94885 1247 aa10.97□□□□□ -0.65
LPCAT3-202ENST00000535021 MMP10P09238 476 aa10.97□□□□□ -0.65
LPCAT3-202ENST00000535021 RGS3P49796 1198 aa10.97□□□□□ -0.65
LPCAT3-202ENST00000535021 ST5P78524 1137 aa10.97□□□□□ -0.65
LPCAT3-202ENST00000535021 OS9Q13438 667 aaPredicted RBP10.97□□□□□ -0.65
LPCAT3-202ENST00000535021 ATG9AQ7Z3C6 839 aa10.97□□□□□ -0.65
LPCAT3-202ENST00000535021 ZNF594Q96JF6 807 aaPredicted RBP10.97□□□□□ -0.65
LPCAT3-202ENST00000535021 NLRP3Q96P20 1036 aa10.97□□□□□ -0.65
LPCAT3-202ENST00000535021 SIL1Q9H173 461 aa10.97□□□□□ -0.65
LPCAT3-202ENST00000535021 SPEF2Q9C093 1822 aa10.96□□□□□ -0.65
LPCAT3-202ENST00000535021 COL4A1P02462 1669 aa10.96□□□□□ -0.65
LPCAT3-202ENST00000535021 SALL3Q9BXA9 1300 aa10.96□□□□□ -0.65
LPCAT3-202ENST00000535021 KLRG2A4D1S0 409 aaPredicted RBP10.96□□□□□ -0.65
LPCAT3-202ENST00000535021 NPHP1O15259 732 aa10.96□□□□□ -0.65
LPCAT3-202ENST00000535021 IL15P40933 162 aaPredicted RBP10.96□□□□□ -0.65
LPCAT3-202ENST00000535021 MSL1Q68DK7 614 aa10.96□□□□□ -0.65
LPCAT3-202ENST00000535021 CCDC24Q8N4L8 307 aa10.96□□□□□ -0.65
LPCAT3-202ENST00000535021 PDGFDQ9GZP0 370 aaPredicted RBP10.96□□□□□ -0.65
LPCAT3-202ENST00000535021 SEC31BQ9NQW1 1179 aa10.96□□□□□ -0.65
LPCAT3-202ENST00000535021 PARP3Q9Y6F1 533 aa10.96□□□□□ -0.65
LPCAT3-202ENST00000535021 CRY2Q49AN0 593 aa10.95□□□□□ -0.66
LPCAT3-202ENST00000535021 LRRC24Q50LG9 513 aa10.95□□□□□ -0.66
LPCAT3-202ENST00000535021 TAF7LQ5H9L4 462 aa10.95□□□□□ -0.66
LPCAT3-202ENST00000535021 ILDR2Q71H61 639 aa10.95□□□□□ -0.66
LPCAT3-202ENST00000535021 CDC5LQ99459 802 aaKnown RBP10.95□□□□□ -0.66
LPCAT3-202ENST00000535021 PUS3Q9BZE2 481 aaKnown RBP10.95□□□□□ -0.66
LPCAT3-202ENST00000535021 IL1RAPL2Q9NP60 686 aa10.95□□□□□ -0.66
LPCAT3-202ENST00000535021 TAF1P21675 1872 aa10.95□□□□□ -0.66
LPCAT3-202ENST00000535021 A0A1B0GUL6 1792 aa10.95□□□□□ -0.66
LPCAT3-202ENST00000535021 TFCP2Q12800 502 aa10.94□□□□□ -0.66
LPCAT3-202ENST00000535021 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
LPCAT3-202ENST00000535021 PLEKHM2Q8IWE5 1019 aa10.94□□□□□ -0.66
LPCAT3-202ENST00000535021 C16orf71Q8IYS4 520 aaPredicted RBP10.94□□□□□ -0.66
LPCAT3-202ENST00000535021 PELP1Q8IZL8 1130 aaKnown RBP10.94□□□□□ -0.66
LPCAT3-202ENST00000535021 CLASRPQ8N2M8 674 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms