RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 ST5P78524 1137 aa11.63□□□□□ -0.55
CCDC90B-219ENST00000534753 PRR5LQ6MZQ0 368 aa11.63□□□□□ -0.55
CCDC90B-219ENST00000534753 TTLL7Q6ZT98 887 aa11.63□□□□□ -0.55
CCDC90B-219ENST00000534753 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-219ENST00000534753 SALL2Q9Y467 1007 aaPredicted RBP11.63□□□□□ -0.55
CCDC90B-219ENST00000534753 KIAA1551Q9HCM1 1747 aa11.63□□□□□ -0.55
CCDC90B-219ENST00000534753 UTRNP46939 3433 aa11.63□□□□□ -0.55
CCDC90B-219ENST00000534753 LAMB4A4D0S4 1761 aa11.62□□□□□ -0.55
CCDC90B-219ENST00000534753 GPTP24298 496 aa11.62□□□□□ -0.55
CCDC90B-219ENST00000534753 AIMP1Q12904 312 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-219ENST00000534753 ELL2O00472 640 aaPredicted RBP11.61□□□□□ -0.55
CCDC90B-219ENST00000534753 CHL1O00533 1208 aa11.61□□□□□ -0.55
CCDC90B-219ENST00000534753 PDE6BP35913 854 aa11.61□□□□□ -0.55
CCDC90B-219ENST00000534753 PROSER3Q2NL68 480 aa11.61□□□□□ -0.55
CCDC90B-219ENST00000534753 CLEC4GQ6UXB4 293 aa11.61□□□□□ -0.55
CCDC90B-219ENST00000534753 BABAM1Q9NWV8 329 aa11.61□□□□□ -0.55
CCDC90B-219ENST00000534753 BCORQ6W2J9 1755 aa11.6□□□□□ -0.55
CCDC90B-219ENST00000534753 POTEJP0CG39 1038 aa11.6□□□□□ -0.55
CCDC90B-219ENST00000534753 PDE4DQ08499 809 aa11.6□□□□□ -0.55
CCDC90B-219ENST00000534753 TPTE2Q6XPS3 522 aa11.6□□□□□ -0.55
CCDC90B-219ENST00000534753 FAM9BQ8IZU0 186 aa11.6□□□□□ -0.55
CCDC90B-219ENST00000534753 TTLL6Q8N841 843 aa11.6□□□□□ -0.55
CCDC90B-219ENST00000534753 ZNF428Q96B54 188 aa11.6□□□□□ -0.55
CCDC90B-219ENST00000534753 BRIP1Q9BX63 1249 aa11.6□□□□□ -0.55
CCDC90B-219ENST00000534753 CDHR5Q9HBB8 845 aa11.6□□□□□ -0.55
CCDC90B-219ENST00000534753 MBIPQ9NS73 344 aa11.6□□□□□ -0.55
CCDC90B-219ENST00000534753 ATP10DQ9P241 1426 aa11.6□□□□□ -0.55
CCDC90B-219ENST00000534753 MAP3K15Q6ZN16 1313 aa11.6□□□□□ -0.55
CCDC90B-219ENST00000534753 SLC34A2O95436 690 aa11.59□□□□□ -0.55
CCDC90B-219ENST00000534753 CALD1Q05682 793 aaKnown RBP11.59□□□□□ -0.55
CCDC90B-219ENST00000534753 HDGFL1Q5TGJ6 251 aa11.59□□□□□ -0.55
CCDC90B-219ENST00000534753 CCDC102AQ96A19 550 aa11.59□□□□□ -0.55
CCDC90B-219ENST00000534753 NRXN2Q9P2S2 1712 aa11.58□□□□□ -0.56
CCDC90B-219ENST00000534753 GNAI1P63096 354 aa11.58□□□□□ -0.56
CCDC90B-219ENST00000534753 RASSF7Q02833 373 aa11.58□□□□□ -0.56
CCDC90B-219ENST00000534753 LCE2DQ5TA82 110 aaPredicted RBP11.58□□□□□ -0.56
CCDC90B-219ENST00000534753 C9orf131Q5VYM1 1079 aa11.58□□□□□ -0.56
CCDC90B-219ENST00000534753 DUSP27Q5VZP5 1158 aa11.58□□□□□ -0.56
CCDC90B-219ENST00000534753 COPS6Q7L5N1 327 aa11.58□□□□□ -0.56
CCDC90B-219ENST00000534753 NUTM1Q86Y26 1132 aa11.58□□□□□ -0.56
CCDC90B-219ENST00000534753 XAGE3Q8WTP9 111 aa11.58□□□□□ -0.56
CCDC90B-219ENST00000534753 CHPF2Q9P2E5 772 aa11.58□□□□□ -0.56
CCDC90B-219ENST00000534753 PCDHGA4Q9Y5G9 962 aa11.58□□□□□ -0.56
CCDC90B-219ENST00000534753 ERVV-1B6SEH8 477 aa11.57□□□□□ -0.56
CCDC90B-219ENST00000534753 C21orf2O43822 256 aa11.57□□□□□ -0.56
CCDC90B-219ENST00000534753 KDM4CQ9H3R0 1056 aa11.57□□□□□ -0.56
CCDC90B-219ENST00000534753 IFT57Q9NWB7 429 aa11.57□□□□□ -0.56
CCDC90B-219ENST00000534753 RNF181Q9P0P0 153 aa11.57□□□□□ -0.56
CCDC90B-219ENST00000534753 BRCA1P38398 1863 aaKnown RBP11.57□□□□□ -0.56
CCDC90B-219ENST00000534753 ERBB4Q15303 1308 aa11.57□□□□□ -0.56
CCDC90B-219ENST00000534753 MAP2K5Q13163 448 aa11.56□□□□□ -0.56
CCDC90B-219ENST00000534753 ERFEQ4G0M1 354 aa11.56□□□□□ -0.56
CCDC90B-219ENST00000534753 MAMSTRQ6ZN01 415 aa11.56□□□□□ -0.56
CCDC90B-219ENST00000534753 ANKRD31Q8N7Z5 1873 aa11.56□□□□□ -0.56
CCDC90B-219ENST00000534753 TSR2Q969E8 191 aaKnown RBP11.56□□□□□ -0.56
CCDC90B-219ENST00000534753 NYXQ9GZU5 481 aa11.56□□□□□ -0.56
CCDC90B-219ENST00000534753 SUSD4Q5VX71 490 aa11.55□□□□□ -0.56
CCDC90B-219ENST00000534753 GIGYF2Q6Y7W6 1299 aaKnown RBP11.55□□□□□ -0.56
CCDC90B-219ENST00000534753 CNKSR1Q969H4 720 aa11.55□□□□□ -0.56
CCDC90B-219ENST00000534753 MASTLQ96GX5 879 aa11.55□□□□□ -0.56
CCDC90B-219ENST00000534753 DDX21Q9NR30 783 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCDC90B-219ENST00000534753 PDZRN3Q9UPQ7 1066 aa11.55□□□□□ -0.56
CCDC90B-219ENST00000534753 UBN2Q6ZU65 1347 aa11.55□□□□□ -0.56
CCDC90B-219ENST00000534753 NUP98P52948 1817 aa11.54□□□□□ -0.56
CCDC90B-219ENST00000534753 ARFGEF1Q9Y6D6 1849 aa11.54□□□□□ -0.56
CCDC90B-219ENST00000534753 TCERG1O14776 1098 aaKnown RBP11.54□□□□□ -0.56
CCDC90B-219ENST00000534753 ZNF853P0CG23 659 aa11.54□□□□□ -0.56
CCDC90B-219ENST00000534753 SRGNP10124 158 aa11.54□□□□□ -0.56
CCDC90B-219ENST00000534753 PTGDRQ13258 359 aa11.54□□□□□ -0.56
CCDC90B-219ENST00000534753 STYK1Q6J9G0 422 aa11.54□□□□□ -0.56
CCDC90B-219ENST00000534753 PRPF40BQ6NWY9 871 aaKnown RBP11.54□□□□□ -0.56
CCDC90B-219ENST00000534753 PPP1R42Q7Z4L9 355 aa11.54□□□□□ -0.56
CCDC90B-219ENST00000534753 WWC1Q8IX03 1113 aa11.54□□□□□ -0.56
CCDC90B-219ENST00000534753 C8orf58Q8NAV2 365 aa11.54□□□□□ -0.56
CCDC90B-219ENST00000534753 IL27Q8NEV9 243 aa11.54□□□□□ -0.56
CCDC90B-219ENST00000534753 DBF4Q9UBU7 674 aaPredicted RBP11.54□□□□□ -0.56
CCDC90B-219ENST00000534753 COL11A2P13942 1736 aaPredicted RBP11.54□□□□□ -0.56
CCDC90B-219ENST00000534753 CACNA1SQ13698 1873 aa11.53□□□□□ -0.56
CCDC90B-219ENST00000534753 IRF6O14896 467 aa11.53□□□□□ -0.56
CCDC90B-219ENST00000534753 NPR1P16066 1061 aa11.53□□□□□ -0.56
CCDC90B-219ENST00000534753 HIC1Q14526 733 aa11.53□□□□□ -0.56
CCDC90B-219ENST00000534753 LRP10Q7Z4F1 713 aa11.53□□□□□ -0.56
CCDC90B-219ENST00000534753 ZNF34Q8IZ26 560 aa11.53□□□□□ -0.56
CCDC90B-219ENST00000534753 RPGRQ92834 1020 aaKnown RBP11.53□□□□□ -0.56
CCDC90B-219ENST00000534753 PCDHGA10Q9Y5H3 936 aa11.53□□□□□ -0.56
CCDC90B-219ENST00000534753 DLEC1Q9Y238 1755 aa11.53□□□□□ -0.56
CCDC90B-219ENST00000534753 ATP5J2-PTCD1G3V325 749 aa11.52□□□□□ -0.57
CCDC90B-219ENST00000534753 HOXB7P09629 217 aa11.52□□□□□ -0.57
CCDC90B-219ENST00000534753 TSR1Q2NL82 804 aaKnown RBP11.52□□□□□ -0.57
CCDC90B-219ENST00000534753 OLFM4Q6UX06 510 aa11.52□□□□□ -0.57
CCDC90B-219ENST00000534753 ANKRD13DQ6ZTN6 518 aa11.52□□□□□ -0.57
CCDC90B-219ENST00000534753 TSPYL6Q8N831 410 aa11.52□□□□□ -0.57
CCDC90B-219ENST00000534753 KHSRPQ92945 711 aaKnown RBP eCLIP11.52□□□□□ -0.57
CCDC90B-219ENST00000534753 UTP14AQ9BVJ6 771 aaKnown RBP11.52□□□□□ -0.57
CCDC90B-219ENST00000534753 HYPKQ9NX55 129 aa11.52□□□□□ -0.57
CCDC90B-219ENST00000534753 ADCY9O60503 1353 aa11.52□□□□□ -0.57
CCDC90B-219ENST00000534753 ABCC12Q96J65 1359 aa11.52□□□□□ -0.57
CCDC90B-219ENST00000534753 NFKBIEO00221 500 aa11.51□□□□□ -0.57
CCDC90B-219ENST00000534753 MAP3K7O43318 606 aa11.51□□□□□ -0.57
CCDC90B-219ENST00000534753 NTSR2O95665 410 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms