RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 INTS3Q68E01 1043 aaKnown RBP30.51■■■□□ 2.47
SIPA1-210ENST00000534406 FTSJ3Q8IY81 847 aaKnown RBP30.51■■■□□ 2.47
SIPA1-210ENST00000534406 CLUAP1Q96AJ1 413 aa30.51■■■□□ 2.47
SIPA1-210ENST00000534406 UTYO14607 1347 aa30.5■■■□□ 2.47
SIPA1-210ENST00000534406 UTRNP46939 3433 aa30.5■■■□□ 2.47
SIPA1-210ENST00000534406 TAF1P21675 1872 aa30.48■■■□□ 2.47
SIPA1-210ENST00000534406 NBPF7P0C2Y1 421 aaPredicted RBP30.47■■■□□ 2.47
SIPA1-210ENST00000534406 GRAPQ13588 217 aa30.47■■■□□ 2.47
SIPA1-210ENST00000534406 DZIP1LQ8IYY4 767 aaKnown RBP30.47■■■□□ 2.47
SIPA1-210ENST00000534406 GRAPLQ8TC17 118 aaPredicted RBP30.47■■■□□ 2.47
SIPA1-210ENST00000534406 RTL9Q8NET4 1388 aa30.46■■■□□ 2.47
SIPA1-210ENST00000534406 PPEF1O14829 653 aaPredicted RBP30.46■■■□□ 2.47
SIPA1-210ENST00000534406 TTLL11Q8NHH1 800 aa30.46■■■□□ 2.47
SIPA1-210ENST00000534406 USP44Q9H0E7 712 aa30.46■■■□□ 2.47
SIPA1-210ENST00000534406 ZNF219Q9P2Y4 722 aaPredicted RBP30.46■■■□□ 2.47
SIPA1-210ENST00000534406 C21orf2O43822 256 aa30.45■■■□□ 2.47
SIPA1-210ENST00000534406 SOGA3Q5TF21 947 aa30.45■■■□□ 2.47
SIPA1-210ENST00000534406 CCDC85AQ96PX6 553 aaPredicted RBP30.45■■■□□ 2.47
SIPA1-210ENST00000534406 TMEM57Q8N5G2 664 aa30.44■■■□□ 2.46
SIPA1-210ENST00000534406 SUCLG2Q96I99 432 aa30.44■■■□□ 2.46
SIPA1-210ENST00000534406 MS4A1P11836 297 aa30.43■■■□□ 2.46
SIPA1-210ENST00000534406 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.43■■■□□ 2.46
SIPA1-210ENST00000534406 GREM2Q9H772 168 aa30.43■■■□□ 2.46
SIPA1-210ENST00000534406 COL4A1P02462 1669 aa30.42■■■□□ 2.46
SIPA1-210ENST00000534406 BBOX1O75936 387 aa30.42■■■□□ 2.46
SIPA1-210ENST00000534406 UBTFL1P0CB47 393 aaPredicted RBP30.42■■■□□ 2.46
SIPA1-210ENST00000534406 RLBP1P12271 317 aa30.42■■■□□ 2.46
SIPA1-210ENST00000534406 FOXO4P98177 505 aa30.42■■■□□ 2.46
SIPA1-210ENST00000534406 CCDC93Q567U6 631 aa30.42■■■□□ 2.46
SIPA1-210ENST00000534406 ARHGAP27Q6ZUM4 889 aa30.42■■■□□ 2.46
SIPA1-210ENST00000534406 C7orf43Q8WVR3 580 aa30.42■■■□□ 2.46
SIPA1-210ENST00000534406 FER1L6Q2WGJ9 1857 aa30.42■■■□□ 2.46
SIPA1-210ENST00000534406 CHD4Q14839 1912 aa30.41■■■□□ 2.46
SIPA1-210ENST00000534406 CSF1RP07333 972 aa30.41■■■□□ 2.46
SIPA1-210ENST00000534406 FAM161AQ3B820 660 aa30.41■■■□□ 2.46
SIPA1-210ENST00000534406 CELF1Q92879 486 aaKnown RBP30.41■■■□□ 2.46
SIPA1-210ENST00000534406 SEC31BQ9NQW1 1179 aa30.41■■■□□ 2.46
SIPA1-210ENST00000534406 LRRC37AA6NMS7 1700 aa30.41■■■□□ 2.46
SIPA1-210ENST00000534406 EPHA10Q5JZY3 1008 aa30.4■■■□□ 2.46
SIPA1-210ENST00000534406 TMC4Q7Z404 712 aa30.4■■■□□ 2.46
SIPA1-210ENST00000534406 CDC5LQ99459 802 aaKnown RBP30.4■■■□□ 2.46
SIPA1-210ENST00000534406 MEIS3Q99687 375 aa30.4■■■□□ 2.46
SIPA1-210ENST00000534406 SPEF2Q9C093 1822 aa30.4■■■□□ 2.46
SIPA1-210ENST00000534406 PLIN1O60240 522 aa30.39■■■□□ 2.46
SIPA1-210ENST00000534406 ITPRIPQ8IWB1 547 aa30.39■■■□□ 2.46
SIPA1-210ENST00000534406 KAZALD1Q96I82 304 aa30.39■■■□□ 2.46
SIPA1-210ENST00000534406 CHMP3Q9Y3E7 222 aa30.39■■■□□ 2.46
SIPA1-210ENST00000534406 CC2D2BQ6DHV5 1058 aa30.38■■■□□ 2.45
SIPA1-210ENST00000534406 LMBR1LQ6UX01 489 aa30.38■■■□□ 2.45
SIPA1-210ENST00000534406 TMX4Q9H1E5 349 aaPredicted RBP30.38■■■□□ 2.45
SIPA1-210ENST00000534406 BICC1Q9H694 974 aaKnown RBP30.38■■■□□ 2.45
SIPA1-210ENST00000534406 HDAC5Q9UQL6 1122 aa30.38■■■□□ 2.45
SIPA1-210ENST00000534406 ATP6V0A2Q9Y487 856 aa30.38■■■□□ 2.45
SIPA1-210ENST00000534406 GNAI3P08754 354 aa30.37■■■□□ 2.45
SIPA1-210ENST00000534406 RPS8P62241 208 aaKnown RBP30.37■■■□□ 2.45
SIPA1-210ENST00000534406 OLFM4Q6UX06 510 aa30.37■■■□□ 2.45
SIPA1-210ENST00000534406 ANKRD18AQ8IVF6 992 aa30.37■■■□□ 2.45
SIPA1-210ENST00000534406 PANK1Q8TE04 598 aa30.37■■■□□ 2.45
SIPA1-210ENST00000534406 ITGA6P23229 1130 aa30.36■■■□□ 2.45
SIPA1-210ENST00000534406 SNED1Q8TER0 1413 aa30.36■■■□□ 2.45
SIPA1-210ENST00000534406 NFKBIEO00221 500 aa30.35■■■□□ 2.45
SIPA1-210ENST00000534406 RABL6Q3YEC7 729 aaPredicted RBP30.35■■■□□ 2.45
SIPA1-210ENST00000534406 RTKN2Q8IZC4 609 aa30.35■■■□□ 2.45
SIPA1-210ENST00000534406 ANKRD18BA2A2Z9 1011 aa30.34■■■□□ 2.45
SIPA1-210ENST00000534406 RASSF7Q02833 373 aa30.34■■■□□ 2.45
SIPA1-210ENST00000534406 IFIT5Q13325 482 aaKnown RBP30.34■■■□□ 2.45
SIPA1-210ENST00000534406 SLC51AQ86UW1 340 aa30.34■■■□□ 2.45
SIPA1-210ENST00000534406 ANKRD44Q8N8A2 993 aa30.34■■■□□ 2.45
SIPA1-210ENST00000534406 TAOK3Q9H2K8 898 aa30.34■■■□□ 2.45
SIPA1-210ENST00000534406 LTBP3Q9NS15 1303 aa30.33■■■□□ 2.45
SIPA1-210ENST00000534406 GRIPAP1Q4V328 841 aa30.33■■■□□ 2.45
SIPA1-210ENST00000534406 SP8Q8IXZ3 490 aa30.33■■■□□ 2.45
SIPA1-210ENST00000534406 LRRFIP2Q9Y608 721 aaKnown RBP30.33■■■□□ 2.45
SIPA1-210ENST00000534406 SBF1O95248 1867 aa30.32■■■□□ 2.44
SIPA1-210ENST00000534406 CCDC57Q2TAC2 916 aa30.32■■■□□ 2.44
SIPA1-210ENST00000534406 IGHMBP2P38935 993 aaKnown RBP30.31■■■□□ 2.44
SIPA1-210ENST00000534406 PDE3AQ14432 1141 aa30.31■■■□□ 2.44
SIPA1-210ENST00000534406 RRP1P56182 461 aaKnown RBP30.3■■■□□ 2.44
SIPA1-210ENST00000534406 FKBP4Q02790 459 aaKnown RBP eCLIP30.3■■■□□ 2.44
SIPA1-210ENST00000534406 MVPQ14764 893 aaKnown RBP30.29■■■□□ 2.44
SIPA1-210ENST00000534406 TAF7LQ5H9L4 462 aa30.29■■■□□ 2.44
SIPA1-210ENST00000534406 LTBP1Q14766 1721 aa30.28■■■□□ 2.44
SIPA1-210ENST00000534406 CCDC88AQ3V6T2 1871 aa30.28■■■□□ 2.44
SIPA1-210ENST00000534406 GNAI2P04899 355 aa30.28■■■□□ 2.44
SIPA1-210ENST00000534406 PSMD1Q99460 953 aa30.28■■■□□ 2.44
SIPA1-210ENST00000534406 MPHOSPH8Q99549 860 aa30.28■■■□□ 2.44
SIPA1-210ENST00000534406 BSDC1Q9NW68 430 aaPredicted RBP30.28■■■□□ 2.44
SIPA1-210ENST00000534406 COG6Q9Y2V7 657 aa30.27■■■□□ 2.44
SIPA1-210ENST00000534406 LMNB1P20700 586 aa30.26■■■□□ 2.43
SIPA1-210ENST00000534406 C20orf194Q5TEA3 1177 aa30.26■■■□□ 2.43
SIPA1-210ENST00000534406 DPP8Q6V1X1 898 aaPredicted RBP30.26■■■□□ 2.43
SIPA1-210ENST00000534406 MPNDQ8N594 471 aa30.26■■■□□ 2.43
SIPA1-210ENST00000534406 DUOX1Q9NRD9 1551 aa30.26■■■□□ 2.43
SIPA1-210ENST00000534406 ZBTB7BO15156 539 aaPredicted RBP30.25■■■□□ 2.43
SIPA1-210ENST00000534406 DDX19BQ9UMR2 479 aa30.25■■■□□ 2.43
SIPA1-210ENST00000534406 TIAM2Q8IVF5 1701 aa30.25■■■□□ 2.43
SIPA1-210ENST00000534406 DICER1Q9UPY3 1922 aaKnown RBP30.24■■■□□ 2.43
SIPA1-210ENST00000534406 RNF181Q9P0P0 153 aa30.24■■■□□ 2.43
SIPA1-210ENST00000534406 C9orf131Q5VYM1 1079 aa30.23■■■□□ 2.43
SIPA1-210ENST00000534406 SUPT20HQ8NEM7 779 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms