RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 IARSP41252 1262 aaKnown RBP20.23■□□□□ 0.83
PAX6-230ENST00000534390 C1QTNF8P60827 252 aa20.23■□□□□ 0.83
PAX6-230ENST00000534390 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
PAX6-230ENST00000534390 SF3B3Q15393 1217 aaKnown RBP20.23■□□□□ 0.83
PAX6-230ENST00000534390 DPY19L2Q6NUT2 758 aa20.23■□□□□ 0.83
PAX6-230ENST00000534390 SLC4A10Q6U841 1118 aa20.23■□□□□ 0.83
PAX6-230ENST00000534390 BCL2L13Q9BXK5 485 aa20.23■□□□□ 0.83
PAX6-230ENST00000534390 CCDC152Q4G0S7 254 aa20.22■□□□□ 0.83
PAX6-230ENST00000534390 C16orf71Q8IYS4 520 aaPredicted RBP20.22■□□□□ 0.83
PAX6-230ENST00000534390 CELF1Q92879 486 aaKnown RBP20.22■□□□□ 0.83
PAX6-230ENST00000534390 PSMD1Q99460 953 aa20.22■□□□□ 0.83
PAX6-230ENST00000534390 RRAGCQ9HB90 399 aa20.22■□□□□ 0.83
PAX6-230ENST00000534390 GLTPD2A6NH11 291 aa20.21■□□□□ 0.83
PAX6-230ENST00000534390 KIF3CO14782 793 aa20.21■□□□□ 0.83
PAX6-230ENST00000534390 GCKRQ14397 625 aa20.21■□□□□ 0.83
PAX6-230ENST00000534390 GRIPAP1Q4V328 841 aa20.21■□□□□ 0.83
PAX6-230ENST00000534390 DPP8Q6V1X1 898 aaPredicted RBP20.21■□□□□ 0.83
PAX6-230ENST00000534390 SP8Q8IXZ3 490 aa20.21■□□□□ 0.83
PAX6-230ENST00000534390 LINS1Q8NG48 757 aa20.21■□□□□ 0.83
PAX6-230ENST00000534390 CDHR2Q9BYE9 1310 aa20.21■□□□□ 0.83
PAX6-230ENST00000534390 CTSWP56202 376 aa20.2■□□□□ 0.82
PAX6-230ENST00000534390 LARGE2Q8N3Y3 721 aa20.2■□□□□ 0.82
PAX6-230ENST00000534390 MPNDQ8N594 471 aa20.2■□□□□ 0.82
PAX6-230ENST00000534390 JDP2Q8WYK2 163 aa20.2■□□□□ 0.82
PAX6-230ENST00000534390 SEC31BQ9NQW1 1179 aa20.2■□□□□ 0.82
PAX6-230ENST00000534390 SNED1Q8TER0 1413 aa20.19■□□□□ 0.82
PAX6-230ENST00000534390 TMC4Q7Z404 712 aa20.19■□□□□ 0.82
PAX6-230ENST00000534390 MRPL50Q8N5N7 158 aaKnown RBP20.19■□□□□ 0.82
PAX6-230ENST00000534390 SSH1Q8WYL5 1049 aa20.19■□□□□ 0.82
PAX6-230ENST00000534390 SMC4Q9NTJ3 1288 aa20.19■□□□□ 0.82
PAX6-230ENST00000534390 MYH3P11055 1940 aa20.18■□□□□ 0.82
PAX6-230ENST00000534390 PPIP5K2O43314 1243 aa20.18■□□□□ 0.82
PAX6-230ENST00000534390 COL4A1P02462 1669 aa20.18■□□□□ 0.82
PAX6-230ENST00000534390 RPS8P62241 208 aaKnown RBP20.17■□□□□ 0.82
PAX6-230ENST00000534390 AOC3Q16853 763 aa20.17■□□□□ 0.82
PAX6-230ENST00000534390 BEND3Q5T5X7 828 aa20.17■□□□□ 0.82
PAX6-230ENST00000534390 SUPT20HQ8NEM7 779 aa20.17■□□□□ 0.82
PAX6-230ENST00000534390 ZNF541Q9H0D2 1346 aa20.17■□□□□ 0.82
PAX6-230ENST00000534390 H7C1W4 665 aa20.16■□□□□ 0.82
PAX6-230ENST00000534390 DDNO94850 711 aaPredicted RBP20.16■□□□□ 0.82
PAX6-230ENST00000534390 NIM1KQ8IY84 436 aa20.16■□□□□ 0.82
PAX6-230ENST00000534390 TRMT2AQ8IZ69 625 aaKnown RBP20.16■□□□□ 0.82
PAX6-230ENST00000534390 NSFL1CQ9UNZ2 370 aaKnown RBP20.16■□□□□ 0.82
PAX6-230ENST00000534390 LRRC37AA6NMS7 1700 aa20.16■□□□□ 0.82
PAX6-230ENST00000534390 ANKRD18AQ8IVF6 992 aa20.15■□□□□ 0.82
PAX6-230ENST00000534390 SRCIN1Q9C0H9 1055 aa20.15■□□□□ 0.82
PAX6-230ENST00000534390 GREM2Q9H772 168 aa20.15■□□□□ 0.82
PAX6-230ENST00000534390 C9orf78Q9NZ63 289 aaPredicted RBP20.15■□□□□ 0.82
PAX6-230ENST00000534390 SPEF2Q9C093 1822 aa20.15■□□□□ 0.82
PAX6-230ENST00000534390 COL4A5P29400 1685 aa20.14■□□□□ 0.81
PAX6-230ENST00000534390 C6orf229H3BNL8 230 aa20.14■□□□□ 0.81
PAX6-230ENST00000534390 VEGFAP15692 232 aaPredicted RBP20.14■□□□□ 0.81
PAX6-230ENST00000534390 EIF6P56537 245 aaKnown RBP20.14■□□□□ 0.81
PAX6-230ENST00000534390 ALDH1L2Q3SY69 923 aa20.14■□□□□ 0.81
PAX6-230ENST00000534390 TTLL11Q8NHH1 800 aa20.14■□□□□ 0.81
PAX6-230ENST00000534390 CDC5LQ99459 802 aaKnown RBP20.14■□□□□ 0.81
PAX6-230ENST00000534390 ANKIB1Q9P2G1 1089 aa20.14■□□□□ 0.81
PAX6-230ENST00000534390 CHMP3Q9Y3E7 222 aa20.14■□□□□ 0.81
PAX6-230ENST00000534390 PTPRCP08575 1304 aa20.13■□□□□ 0.81
PAX6-230ENST00000534390 TOMM70O94826 608 aa20.13■□□□□ 0.81
PAX6-230ENST00000534390 GPSM2P81274 684 aa20.13■□□□□ 0.81
PAX6-230ENST00000534390 GJA3Q9Y6H8 435 aa20.13■□□□□ 0.81
PAX6-230ENST00000534390 GRM8O00222 908 aa20.12■□□□□ 0.81
PAX6-230ENST00000534390 ALDH1L1O75891 902 aa20.12■□□□□ 0.81
PAX6-230ENST00000534390 CT47B1P0C2W7 299 aaPredicted RBP20.12■□□□□ 0.81
PAX6-230ENST00000534390 FAM161AQ3B820 660 aa20.12■□□□□ 0.81
PAX6-230ENST00000534390 RTFDC1Q9BY42 306 aaPredicted RBP20.12■□□□□ 0.81
PAX6-230ENST00000534390 WDR90Q96KV7 1748 aa20.12■□□□□ 0.81
PAX6-230ENST00000534390 FZD9O00144 591 aa20.11■□□□□ 0.81
PAX6-230ENST00000534390 CASP7P55210 303 aa20.11■□□□□ 0.81
PAX6-230ENST00000534390 DUOX1Q9NRD9 1551 aa20.11■□□□□ 0.81
PAX6-230ENST00000534390 RIMBP2O15034 1052 aa20.1■□□□□ 0.81
PAX6-230ENST00000534390 UFL1O94874 794 aa20.1■□□□□ 0.81
PAX6-230ENST00000534390 GPR101Q96P66 508 aaPredicted RBP20.1■□□□□ 0.81
PAX6-230ENST00000534390 PLA2G12BQ9BX93 195 aa20.1■□□□□ 0.81
PAX6-230ENST00000534390 ITGA6P23229 1130 aa20.09■□□□□ 0.81
PAX6-230ENST00000534390 IGHMBP2P38935 993 aaKnown RBP20.09■□□□□ 0.81
PAX6-230ENST00000534390 KIAA2012Q0VF49 1180 aa20.09■□□□□ 0.81
PAX6-230ENST00000534390 WASHC4Q2M389 1173 aa20.09■□□□□ 0.81
PAX6-230ENST00000534390 RBM46Q8TBY0 533 aaKnown RBP20.09■□□□□ 0.81
PAX6-230ENST00000534390 VPS33BQ9H267 617 aa20.09■□□□□ 0.81
PAX6-230ENST00000534390 IQCA1LA6NCM1 817 aa20.08■□□□□ 0.81
PAX6-230ENST00000534390 GPC2Q8N158 579 aa20.08■□□□□ 0.81
PAX6-230ENST00000534390 EYA3Q99504 573 aa20.08■□□□□ 0.81
PAX6-230ENST00000534390 POLLQ9UGP5 575 aa20.08■□□□□ 0.81
PAX6-230ENST00000534390 GGA1Q9UJY5 639 aa20.08■□□□□ 0.81
PAX6-230ENST00000534390 ZNRF3Q9ULT6 936 aa20.08■□□□□ 0.81
PAX6-230ENST00000534390 NOB1Q9ULX3 412 aaKnown RBP20.08■□□□□ 0.81
PAX6-230ENST00000534390 RTL9Q8NET4 1388 aa20.08■□□□□ 0.8
PAX6-230ENST00000534390 ANKRD18BA2A2Z9 1011 aa20.07■□□□□ 0.8
PAX6-230ENST00000534390 POTECB2RU33 542 aa20.07■□□□□ 0.8
PAX6-230ENST00000534390 G3V3G9 751 aa20.07■□□□□ 0.8
PAX6-230ENST00000534390 DCAF8Q5TAQ9 597 aa20.07■□□□□ 0.8
PAX6-230ENST00000534390 TBC1D16Q8TBP0 767 aa20.07■□□□□ 0.8
PAX6-230ENST00000534390 MPHOSPH8Q99549 860 aa20.07■□□□□ 0.8
PAX6-230ENST00000534390 XDHP47989 1333 aa20.06■□□□□ 0.8
PAX6-230ENST00000534390 RAD17O75943 681 aa20.06■□□□□ 0.8
PAX6-230ENST00000534390 RARSP54136 660 aaKnown RBP20.06■□□□□ 0.8
PAX6-230ENST00000534390 FOXO4P98177 505 aa20.06■□□□□ 0.8
PAX6-230ENST00000534390 IFIT5Q13325 482 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms