RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 COL4A5P29400 1685 aa15.73■□□□□ 0.11
CHRDL2-209ENST00000534276 SCN4AP35499 1836 aa15.72■□□□□ 0.11
CHRDL2-209ENST00000534276 GNAI1P63096 354 aa15.72■□□□□ 0.11
CHRDL2-209ENST00000534276 CREBZFQ9NS37 354 aa15.72■□□□□ 0.11
CHRDL2-209ENST00000534276 DDX46Q7L014 1031 aaKnown RBP15.71■□□□□ 0.11
CHRDL2-209ENST00000534276 PNMA8AQ86V59 439 aaPredicted RBP15.71■□□□□ 0.11
CHRDL2-209ENST00000534276 SP8Q8IXZ3 490 aa15.71■□□□□ 0.11
CHRDL2-209ENST00000534276 NIM1KQ8IY84 436 aa15.71■□□□□ 0.11
CHRDL2-209ENST00000534276 ZNF428Q96B54 188 aa15.71■□□□□ 0.11
CHRDL2-209ENST00000534276 GJA3Q9Y6H8 435 aa15.71■□□□□ 0.11
CHRDL2-209ENST00000534276 PASKQ96RG2 1323 aa15.7■□□□□ 0.1
CHRDL2-209ENST00000534276 ATP5J2-PTCD1G3V325 749 aa15.7■□□□□ 0.1
CHRDL2-209ENST00000534276 ELL2O00472 640 aaPredicted RBP15.7■□□□□ 0.1
CHRDL2-209ENST00000534276 PPIP5K2O43314 1243 aa15.7■□□□□ 0.1
CHRDL2-209ENST00000534276 ITGBL1O95965 494 aaPredicted RBP15.7■□□□□ 0.1
CHRDL2-209ENST00000534276 RRP1P56182 461 aaKnown RBP15.7■□□□□ 0.1
CHRDL2-209ENST00000534276 GRAPQ13588 217 aa15.7■□□□□ 0.1
CHRDL2-209ENST00000534276 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.7■□□□□ 0.1
CHRDL2-209ENST00000534276 GRAPLQ8TC17 118 aaPredicted RBP15.7■□□□□ 0.1
CHRDL2-209ENST00000534276 RTFDC1Q9BY42 306 aaPredicted RBP15.7■□□□□ 0.1
CHRDL2-209ENST00000534276 VPS33BQ9H267 617 aa15.7■□□□□ 0.1
CHRDL2-209ENST00000534276 CLEC11AQ9Y240 323 aa15.7■□□□□ 0.1
CHRDL2-209ENST00000534276 ANKRD36CQ5JPF3 1778 aa15.7■□□□□ 0.1
CHRDL2-209ENST00000534276 TRIM28Q13263 835 aaKnown RBP15.69■□□□□ 0.1
CHRDL2-209ENST00000534276 AOC3Q16853 763 aa15.69■□□□□ 0.1
CHRDL2-209ENST00000534276 SUPT20HQ8NEM7 779 aa15.69■□□□□ 0.1
CHRDL2-209ENST00000534276 FAM89AQ96GI7 184 aa15.69■□□□□ 0.1
CHRDL2-209ENST00000534276 DPP8Q6V1X1 898 aaPredicted RBP15.68■□□□□ 0.1
CHRDL2-209ENST00000534276 MPNDQ8N594 471 aa15.68■□□□□ 0.1
CHRDL2-209ENST00000534276 C8orf58Q8NAV2 365 aa15.68■□□□□ 0.1
CHRDL2-209ENST00000534276 FANCIQ9NVI1 1328 aa15.68■□□□□ 0.1
CHRDL2-209ENST00000534276 LMOD1P29536 600 aaPredicted RBP15.68■□□□□ 0.1
CHRDL2-209ENST00000534276 SCNN1DP51172 638 aa15.68■□□□□ 0.1
CHRDL2-209ENST00000534276 SF3B3Q15393 1217 aaKnown RBP15.68■□□□□ 0.1
CHRDL2-209ENST00000534276 TMC4Q7Z404 712 aa15.68■□□□□ 0.1
CHRDL2-209ENST00000534276 PHAXQ9H814 394 aaKnown RBP15.68■□□□□ 0.1
CHRDL2-209ENST00000534276 ZNRF3Q9ULT6 936 aa15.68■□□□□ 0.1
CHRDL2-209ENST00000534276 EPS15P42566 896 aa15.67■□□□□ 0.1
CHRDL2-209ENST00000534276 MAP1SQ66K74 1059 aaPredicted RBP15.67■□□□□ 0.1
CHRDL2-209ENST00000534276 RIC3Q7Z5B4 369 aa15.67■□□□□ 0.1
CHRDL2-209ENST00000534276 CNTROBQ8N137 903 aa15.67■□□□□ 0.1
CHRDL2-209ENST00000534276 MKRN1Q9UHC7 482 aaKnown RBP15.67■□□□□ 0.1
CHRDL2-209ENST00000534276 CXCL9Q07325 125 aa15.66■□□□□ 0.1
CHRDL2-209ENST00000534276 KIAA2012Q0VF49 1180 aa15.66■□□□□ 0.1
CHRDL2-209ENST00000534276 RTL5Q5HYW3 569 aaPredicted RBP15.66■□□□□ 0.1
CHRDL2-209ENST00000534276 LAMB2P55268 1798 aa15.66■□□□□ 0.1
CHRDL2-209ENST00000534276 ADAMTSL1Q8N6G6 1762 aa15.66■□□□□ 0.1
CHRDL2-209ENST00000534276 TMEM88BA6NKF7 163 aa15.65■□□□□ 0.1
CHRDL2-209ENST00000534276 IRS4O14654 1257 aaPredicted RBP15.65■□□□□ 0.1
CHRDL2-209ENST00000534276 CCDC30Q5VVM6 783 aa15.65■□□□□ 0.1
CHRDL2-209ENST00000534276 CELF1Q92879 486 aaKnown RBP15.65■□□□□ 0.1
CHRDL2-209ENST00000534276 CHMP4AQ9BY43 222 aa15.65■□□□□ 0.1
CHRDL2-209ENST00000534276 HSPA1AP0DMV8 641 aaKnown RBP15.64■□□□□ 0.09
CHRDL2-209ENST00000534276 HSPA1BP0DMV9 641 aaKnown RBP15.64■□□□□ 0.09
CHRDL2-209ENST00000534276 COL13A1Q5TAT6 717 aaPredicted RBP15.64■□□□□ 0.09
CHRDL2-209ENST00000534276 TSPYL6Q8N831 410 aa15.64■□□□□ 0.09
CHRDL2-209ENST00000534276 ZBTB38Q8NAP3 1195 aaPredicted RBP15.64■□□□□ 0.09
CHRDL2-209ENST00000534276 LTBP1Q14766 1721 aa15.63■□□□□ 0.09
CHRDL2-209ENST00000534276 USP50Q70EL3 339 aaPredicted RBP15.63■□□□□ 0.09
CHRDL2-209ENST00000534276 MYD88Q99836 296 aa15.63■□□□□ 0.09
CHRDL2-209ENST00000534276 GPRC5DQ9NZD1 345 aa15.63■□□□□ 0.09
CHRDL2-209ENST00000534276 CNTNAP1P78357 1384 aa15.63■□□□□ 0.09
CHRDL2-209ENST00000534276 RARSP54136 660 aaKnown RBP15.62■□□□□ 0.09
CHRDL2-209ENST00000534276 CIAPIN1Q6FI81 312 aa15.62■□□□□ 0.09
CHRDL2-209ENST00000534276 CCDC191Q8NCU4 936 aa15.62■□□□□ 0.09
CHRDL2-209ENST00000534276 TSR2Q969E8 191 aaKnown RBP15.62■□□□□ 0.09
CHRDL2-209ENST00000534276 METTL22Q9BUU2 404 aaPredicted RBP15.62■□□□□ 0.09
CHRDL2-209ENST00000534276 PPP4R2Q9NY27 417 aa15.62■□□□□ 0.09
CHRDL2-209ENST00000534276 NSFL1CQ9UNZ2 370 aaKnown RBP15.62■□□□□ 0.09
CHRDL2-209ENST00000534276 DDX60Q8IY21 1712 aaKnown RBP15.61■□□□□ 0.09
CHRDL2-209ENST00000534276 RAD17O75943 681 aa15.61■□□□□ 0.09
CHRDL2-209ENST00000534276 DDX58O95786 925 aaKnown RBP15.61■□□□□ 0.09
CHRDL2-209ENST00000534276 HSP90B1P14625 803 aaKnown RBP15.61■□□□□ 0.09
CHRDL2-209ENST00000534276 GMPSP49915 693 aaPredicted RBP15.61■□□□□ 0.09
CHRDL2-209ENST00000534276 BRPF1P55201 1214 aaPredicted RBP15.61■□□□□ 0.09
CHRDL2-209ENST00000534276 RPS8P62241 208 aaKnown RBP15.61■□□□□ 0.09
CHRDL2-209ENST00000534276 EXOSC9Q06265 439 aaKnown RBP15.61■□□□□ 0.09
CHRDL2-209ENST00000534276 ALDH1L2Q3SY69 923 aa15.61■□□□□ 0.09
CHRDL2-209ENST00000534276 ADARB2Q9NS39 739 aaKnown RBP15.61■□□□□ 0.09
CHRDL2-209ENST00000534276 DUOX1Q9NRD9 1551 aa15.61■□□□□ 0.09
CHRDL2-209ENST00000534276 TAF1P21675 1872 aa15.61■□□□□ 0.09
CHRDL2-209ENST00000534276 YDJCA8MPS7 323 aa15.6■□□□□ 0.09
CHRDL2-209ENST00000534276 PCCAP05165 728 aaPredicted RBP15.6■□□□□ 0.09
CHRDL2-209ENST00000534276 PDE3AQ14432 1141 aa15.6■□□□□ 0.09
CHRDL2-209ENST00000534276 TNIP1Q15025 636 aa15.6■□□□□ 0.09
CHRDL2-209ENST00000534276 CWC25Q9NXE8 425 aaPredicted RBP15.6■□□□□ 0.09
CHRDL2-209ENST00000534276 VEGFBP49765 207 aa15.6■□□□□ 0.09
CHRDL2-209ENST00000534276 GPSM2P81274 684 aa15.6■□□□□ 0.09
CHRDL2-209ENST00000534276 WASHC4Q2M389 1173 aa15.6■□□□□ 0.09
CHRDL2-209ENST00000534276 POLLQ9UGP5 575 aa15.6■□□□□ 0.09
CHRDL2-209ENST00000534276 MAP3K2Q9Y2U5 619 aa15.6■□□□□ 0.09
CHRDL2-209ENST00000534276 CDHR2Q9BYE9 1310 aa15.59■□□□□ 0.09
CHRDL2-209ENST00000534276 LRRC37AA6NMS7 1700 aa15.59■□□□□ 0.09
CHRDL2-209ENST00000534276 C6orf229H3BNL8 230 aa15.59■□□□□ 0.09
CHRDL2-209ENST00000534276 KSR2Q6VAB6 950 aa15.59■□□□□ 0.09
CHRDL2-209ENST00000534276 JARID2Q92833 1246 aaPredicted RBP15.59■□□□□ 0.09
CHRDL2-209ENST00000534276 BCL2L13Q9BXK5 485 aa15.59■□□□□ 0.09
CHRDL2-209ENST00000534276 SEC31BQ9NQW1 1179 aa15.59■□□□□ 0.09
CHRDL2-209ENST00000534276 COL4A1P02462 1669 aa15.58■□□□□ 0.09
CHRDL2-209ENST00000534276 PI4KAP2A4QPH2 592 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms