RNA–Protein interactions for RNA: ENST00000534273.1

PACS1-215, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-215ENST00000534273 CDHR2Q9BYE9 1310 aa24.21■■□□□ 1.47
PACS1-215ENST00000534273 IARSP41252 1262 aaKnown RBP24.21■■□□□ 1.47
PACS1-215ENST00000534273 CCDC88AQ3V6T2 1871 aa24.2■■□□□ 1.46
PACS1-215ENST00000534273 PDE8AO60658 829 aa24.2■■□□□ 1.46
PACS1-215ENST00000534273 TMC4Q7Z404 712 aa24.2■■□□□ 1.46
PACS1-215ENST00000534273 LINS1Q8NG48 757 aa24.2■■□□□ 1.46
PACS1-215ENST00000534273 RRAGCQ9HB90 399 aa24.2■■□□□ 1.46
PACS1-215ENST00000534273 F6X3S4 739 aa24.19■■□□□ 1.46
PACS1-215ENST00000534273 H7C1W4 665 aa24.19■■□□□ 1.46
PACS1-215ENST00000534273 GCKRQ14397 625 aa24.19■■□□□ 1.46
PACS1-215ENST00000534273 DPY19L2Q6NUT2 758 aa24.19■■□□□ 1.46
PACS1-215ENST00000534273 CELF1Q92879 486 aaKnown RBP24.19■■□□□ 1.46
PACS1-215ENST00000534273 CACNA1FO60840 1977 aa24.19■■□□□ 1.46
PACS1-215ENST00000534273 TIAM2Q8IVF5 1701 aa24.18■■□□□ 1.46
PACS1-215ENST00000534273 CCDC152Q4G0S7 254 aa24.17■■□□□ 1.46
PACS1-215ENST00000534273 MRPL50Q8N5N7 158 aaKnown RBP24.17■■□□□ 1.46
PACS1-215ENST00000534273 RTFDC1Q9BY42 306 aaPredicted RBP24.17■■□□□ 1.46
PACS1-215ENST00000534273 DICER1Q9UPY3 1922 aaKnown RBP24.17■■□□□ 1.46
PACS1-215ENST00000534273 RPS8P62241 208 aaKnown RBP24.16■■□□□ 1.46
PACS1-215ENST00000534273 BEND3Q5T5X7 828 aa24.16■■□□□ 1.46
PACS1-215ENST00000534273 UBE3BQ7Z3V4 1068 aa24.16■■□□□ 1.46
PACS1-215ENST00000534273 MPNDQ8N594 471 aa24.16■■□□□ 1.46
PACS1-215ENST00000534273 SEC31BQ9NQW1 1179 aa24.16■■□□□ 1.46
PACS1-215ENST00000534273 TOMM70O94826 608 aa24.15■■□□□ 1.46
PACS1-215ENST00000534273 CASP7P55210 303 aa24.15■■□□□ 1.46
PACS1-215ENST00000534273 CTSWP56202 376 aa24.15■■□□□ 1.46
PACS1-215ENST00000534273 DPP8Q6V1X1 898 aaPredicted RBP24.15■■□□□ 1.46
PACS1-215ENST00000534273 SSH1Q8WYL5 1049 aa24.15■■□□□ 1.46
PACS1-215ENST00000534273 FZD9O00144 591 aa24.14■■□□□ 1.45
PACS1-215ENST00000534273 DDNO94850 711 aaPredicted RBP24.14■■□□□ 1.45
PACS1-215ENST00000534273 VEGFAP15692 232 aaPredicted RBP24.14■■□□□ 1.45
PACS1-215ENST00000534273 SUPT20HQ8NEM7 779 aa24.14■■□□□ 1.45
PACS1-215ENST00000534273 JDP2Q8WYK2 163 aa24.14■■□□□ 1.45
PACS1-215ENST00000534273 CCDC85AQ96PX6 553 aaPredicted RBP24.14■■□□□ 1.45
PACS1-215ENST00000534273 ZNF541Q9H0D2 1346 aa24.13■■□□□ 1.45
PACS1-215ENST00000534273 POTECB2RU33 542 aa24.13■■□□□ 1.45
PACS1-215ENST00000534273 LARGE2Q8N3Y3 721 aa24.13■■□□□ 1.45
PACS1-215ENST00000534273 TTLL11Q8NHH1 800 aa24.13■■□□□ 1.45
PACS1-215ENST00000534273 VPS33BQ9H267 617 aa24.13■■□□□ 1.45
PACS1-215ENST00000534273 COL4A1P02462 1669 aa24.13■■□□□ 1.45
PACS1-215ENST00000534273 C16orf71Q8IYS4 520 aaPredicted RBP24.12■■□□□ 1.45
PACS1-215ENST00000534273 PLA2G12BQ9BX93 195 aa24.12■■□□□ 1.45
PACS1-215ENST00000534273 TAF1P21675 1872 aa24.12■■□□□ 1.45
PACS1-215ENST00000534273 COL4A5P29400 1685 aa24.11■■□□□ 1.45
PACS1-215ENST00000534273 PPIP5K2O43314 1243 aa24.11■■□□□ 1.45
PACS1-215ENST00000534273 RBM46Q8TBY0 533 aaKnown RBP24.11■■□□□ 1.45
PACS1-215ENST00000534273 CT47B1P0C2W7 299 aaPredicted RBP24.1■■□□□ 1.45
PACS1-215ENST00000534273 AOC3Q16853 763 aa24.1■■□□□ 1.45
PACS1-215ENST00000534273 ALDH1L2Q3SY69 923 aa24.1■■□□□ 1.45
PACS1-215ENST00000534273 RTL9Q8NET4 1388 aa24.09■■□□□ 1.45
PACS1-215ENST00000534273 GPSM2P81274 684 aa24.09■■□□□ 1.45
PACS1-215ENST00000534273 SLC4A10Q6U841 1118 aa24.09■■□□□ 1.45
PACS1-215ENST00000534273 NIM1KQ8IY84 436 aa24.09■■□□□ 1.45
PACS1-215ENST00000534273 L3MBTL3Q96JM7 780 aaPredicted RBP24.09■■□□□ 1.45
PACS1-215ENST00000534273 BCL2L13Q9BXK5 485 aa24.09■■□□□ 1.45
PACS1-215ENST00000534273 GREM2Q9H772 168 aa24.09■■□□□ 1.45
PACS1-215ENST00000534273 NSFL1CQ9UNZ2 370 aaKnown RBP24.09■■□□□ 1.45
PACS1-215ENST00000534273 WDR90Q96KV7 1748 aa24.09■■□□□ 1.45
PACS1-215ENST00000534273 ALDH1L1O75891 902 aa24.08■■□□□ 1.45
PACS1-215ENST00000534273 KIAA2012Q0VF49 1180 aa24.08■■□□□ 1.45
PACS1-215ENST00000534273 ANKRD18AQ8IVF6 992 aa24.08■■□□□ 1.45
PACS1-215ENST00000534273 PTPRCP08575 1304 aa24.08■■□□□ 1.44
PACS1-215ENST00000534273 EIF6P56537 245 aaKnown RBP24.07■■□□□ 1.44
PACS1-215ENST00000534273 CDC5LQ99459 802 aaKnown RBP24.07■■□□□ 1.44
PACS1-215ENST00000534273 SRCIN1Q9C0H9 1055 aa24.07■■□□□ 1.44
PACS1-215ENST00000534273 LRRC37AA6NMS7 1700 aa24.07■■□□□ 1.44
PACS1-215ENST00000534273 CSF1RP07333 972 aa24.06■■□□□ 1.44
PACS1-215ENST00000534273 HNRNPUQ00839 825 aaKnown RBP eCLIP24.06■■□□□ 1.44
PACS1-215ENST00000534273 GPC2Q8N158 579 aa24.06■■□□□ 1.44
PACS1-215ENST00000534273 SMC4Q9NTJ3 1288 aa24.06■■□□□ 1.44
PACS1-215ENST00000534273 POLLQ9UGP5 575 aa24.06■■□□□ 1.44
PACS1-215ENST00000534273 DUOX1Q9NRD9 1551 aa24.05■■□□□ 1.44
PACS1-215ENST00000534273 GRM8O00222 908 aa24.05■■□□□ 1.44
PACS1-215ENST00000534273 PODXL2Q9NZ53 605 aa24.05■■□□□ 1.44
PACS1-215ENST00000534273 ZNRF3Q9ULT6 936 aa24.05■■□□□ 1.44
PACS1-215ENST00000534273 FOXO4P98177 505 aa24.04■■□□□ 1.44
PACS1-215ENST00000534273 FSTL1Q12841 308 aa24.04■■□□□ 1.44
PACS1-215ENST00000534273 TBC1D16Q8TBP0 767 aa24.04■■□□□ 1.44
PACS1-215ENST00000534273 IQCA1LA6NCM1 817 aa24.03■■□□□ 1.44
PACS1-215ENST00000534273 C6orf229H3BNL8 230 aa24.03■■□□□ 1.44
PACS1-215ENST00000534273 HSPA6P17066 643 aa24.03■■□□□ 1.44
PACS1-215ENST00000534273 FAM161AQ3B820 660 aa24.03■■□□□ 1.44
PACS1-215ENST00000534273 BSDC1Q9NW68 430 aaPredicted RBP24.03■■□□□ 1.44
PACS1-215ENST00000534273 C9orf78Q9NZ63 289 aaPredicted RBP24.03■■□□□ 1.44
PACS1-215ENST00000534273 ITGA6P23229 1130 aa24.02■■□□□ 1.44
PACS1-215ENST00000534273 WASHC4Q2M389 1173 aa24.02■■□□□ 1.44
PACS1-215ENST00000534273 SMC1BQ8NDV3 1235 aa24.02■■□□□ 1.44
PACS1-215ENST00000534273 ANKIB1Q9P2G1 1089 aa24.02■■□□□ 1.44
PACS1-215ENST00000534273 GJA3Q9Y6H8 435 aa24.02■■□□□ 1.44
PACS1-215ENST00000534273 BRPF1P55201 1214 aaPredicted RBP24.01■■□□□ 1.43
PACS1-215ENST00000534273 CXCL9Q07325 125 aa24.01■■□□□ 1.43
PACS1-215ENST00000534273 TAF1DQ9H5J8 278 aaPredicted RBP24.01■■□□□ 1.43
PACS1-215ENST00000534273 RIMBP2O15034 1052 aa24■■□□□ 1.43
PACS1-215ENST00000534273 RARSP54136 660 aaKnown RBP24■■□□□ 1.43
PACS1-215ENST00000534273 EPHA10Q5JZY3 1008 aa24■■□□□ 1.43
PACS1-215ENST00000534273 GPR101Q96P66 508 aaPredicted RBP24■■□□□ 1.43
PACS1-215ENST00000534273 EYA3Q99504 573 aa24■■□□□ 1.43
PACS1-215ENST00000534273 HACL1Q9UJ83 578 aa24■■□□□ 1.43
PACS1-215ENST00000534273 GGA1Q9UJY5 639 aa24■■□□□ 1.43
PACS1-215ENST00000534273 MINPP1Q9UNW1 487 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms