RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 CRY2Q49AN0 593 aa12.55□□□□□ -0.4
LDLRAD3-206ENST00000534091 SLC10A5Q5PT55 438 aa12.55□□□□□ -0.4
LDLRAD3-206ENST00000534091 LTBP3Q9NS15 1303 aa12.55□□□□□ -0.4
LDLRAD3-206ENST00000534091 NEURL1BA8MQ27 555 aa12.54□□□□□ -0.4
LDLRAD3-206ENST00000534091 IGKV5-2P06315 115 aa12.54□□□□□ -0.4
LDLRAD3-206ENST00000534091 HSP90B1P14625 803 aaKnown RBP12.54□□□□□ -0.4
LDLRAD3-206ENST00000534091 ZNF622Q969S3 477 aaKnown RBP eCLIP12.54□□□□□ -0.4
LDLRAD3-206ENST00000534091 UTP14AQ9BVJ6 771 aaKnown RBP12.54□□□□□ -0.4
LDLRAD3-206ENST00000534091 DCTPP1Q9H773 170 aa12.54□□□□□ -0.4
LDLRAD3-206ENST00000534091 UBN2Q6ZU65 1347 aa12.54□□□□□ -0.4
LDLRAD3-206ENST00000534091 UTRNP46939 3433 aa12.53□□□□□ -0.4
LDLRAD3-206ENST00000534091 FER1L6Q2WGJ9 1857 aa12.53□□□□□ -0.4
LDLRAD3-206ENST00000534091 MYH3P11055 1940 aa12.53□□□□□ -0.4
LDLRAD3-206ENST00000534091 NTSR2O95665 410 aa12.53□□□□□ -0.4
LDLRAD3-206ENST00000534091 HOXA10P31260 410 aaPredicted RBP12.53□□□□□ -0.4
LDLRAD3-206ENST00000534091 ATP8B2P98198 1209 aa12.53□□□□□ -0.4
LDLRAD3-206ENST00000534091 SUSD4Q5VX71 490 aa12.53□□□□□ -0.4
LDLRAD3-206ENST00000534091 CC2D2BQ6DHV5 1058 aa12.53□□□□□ -0.4
LDLRAD3-206ENST00000534091 GRM8O00222 908 aa12.52□□□□□ -0.41
LDLRAD3-206ENST00000534091 LMNB1P20700 586 aa12.52□□□□□ -0.41
LDLRAD3-206ENST00000534091 MTX1Q13505 466 aa12.52□□□□□ -0.41
LDLRAD3-206ENST00000534091 NLRP10Q86W26 655 aa12.52□□□□□ -0.41
LDLRAD3-206ENST00000534091 NLRP3Q96P20 1036 aa12.52□□□□□ -0.41
LDLRAD3-206ENST00000534091 MYD88Q99836 296 aa12.52□□□□□ -0.41
LDLRAD3-206ENST00000534091 LRRFIP2Q9Y608 721 aaKnown RBP12.52□□□□□ -0.41
LDLRAD3-206ENST00000534091 SLX4Q8IY92 1834 aa12.51□□□□□ -0.41
LDLRAD3-206ENST00000534091 DICER1Q9UPY3 1922 aaKnown RBP12.51□□□□□ -0.41
LDLRAD3-206ENST00000534091 NBPF7P0C2Y1 421 aaPredicted RBP12.51□□□□□ -0.41
LDLRAD3-206ENST00000534091 GPTP24298 496 aa12.51□□□□□ -0.41
LDLRAD3-206ENST00000534091 NUCB1Q02818 461 aa12.51□□□□□ -0.41
LDLRAD3-206ENST00000534091 GCKRQ14397 625 aa12.51□□□□□ -0.41
LDLRAD3-206ENST00000534091 CWF19L2Q2TBE0 894 aaKnown RBP12.51□□□□□ -0.41
LDLRAD3-206ENST00000534091 PRPF40BQ6NWY9 871 aaKnown RBP12.51□□□□□ -0.41
LDLRAD3-206ENST00000534091 RTKN2Q8IZC4 609 aa12.51□□□□□ -0.41
LDLRAD3-206ENST00000534091 SSH3Q8TE77 659 aa12.51□□□□□ -0.41
LDLRAD3-206ENST00000534091 CRAMP1Q96RY5 1269 aa12.51□□□□□ -0.41
LDLRAD3-206ENST00000534091 ISCA1Q9BUE6 129 aa12.51□□□□□ -0.41
LDLRAD3-206ENST00000534091 GPBP1L1Q9HC44 474 aaPredicted RBP12.51□□□□□ -0.41
LDLRAD3-206ENST00000534091 C9orf78Q9NZ63 289 aaPredicted RBP12.51□□□□□ -0.41
LDLRAD3-206ENST00000534091 WWC3Q9ULE0 1092 aa12.51□□□□□ -0.41
LDLRAD3-206ENST00000534091 SH3TC1Q8TE82 1336 aa12.51□□□□□ -0.41
LDLRAD3-206ENST00000534091 GOLGB1Q14789 3259 aaKnown RBP12.5□□□□□ -0.41
LDLRAD3-206ENST00000534091 POLA2Q14181 598 aa12.5□□□□□ -0.41
LDLRAD3-206ENST00000534091 ERFEQ4G0M1 354 aa12.5□□□□□ -0.41
LDLRAD3-206ENST00000534091 CCDC93Q567U6 631 aa12.5□□□□□ -0.41
LDLRAD3-206ENST00000534091 C9orf131Q5VYM1 1079 aa12.5□□□□□ -0.41
LDLRAD3-206ENST00000534091 CCDC191Q8NCU4 936 aa12.5□□□□□ -0.41
LDLRAD3-206ENST00000534091 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
LDLRAD3-206ENST00000534091 RPGRQ92834 1020 aaKnown RBP12.5□□□□□ -0.41
LDLRAD3-206ENST00000534091 RBM17Q96I25 401 aaKnown RBP12.5□□□□□ -0.41
LDLRAD3-206ENST00000534091 CACNA1SQ13698 1873 aa12.49□□□□□ -0.41
LDLRAD3-206ENST00000534091 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
LDLRAD3-206ENST00000534091 ABCC12Q96J65 1359 aa12.49□□□□□ -0.41
LDLRAD3-206ENST00000534091 TMC4Q7Z404 712 aa12.49□□□□□ -0.41
LDLRAD3-206ENST00000534091 CHD1LQ86WJ1 897 aa12.49□□□□□ -0.41
LDLRAD3-206ENST00000534091 NUTM1Q86Y26 1132 aa12.49□□□□□ -0.41
LDLRAD3-206ENST00000534091 CCDC24Q8N4L8 307 aa12.49□□□□□ -0.41
LDLRAD3-206ENST00000534091 RNF181Q9P0P0 153 aa12.49□□□□□ -0.41
LDLRAD3-206ENST00000534091 TRMT112Q9UI30 125 aaKnown RBP12.49□□□□□ -0.41
LDLRAD3-206ENST00000534091 LAMB2P55268 1798 aa12.48□□□□□ -0.41
LDLRAD3-206ENST00000534091 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
LDLRAD3-206ENST00000534091 FAM177BA6PVY3 158 aa12.48□□□□□ -0.41
LDLRAD3-206ENST00000534091 NFKBIEO00221 500 aa12.48□□□□□ -0.41
LDLRAD3-206ENST00000534091 C21orf2O43822 256 aa12.48□□□□□ -0.41
LDLRAD3-206ENST00000534091 CASP7P55210 303 aa12.48□□□□□ -0.41
LDLRAD3-206ENST00000534091 VPS33BQ9H267 617 aa12.48□□□□□ -0.41
LDLRAD3-206ENST00000534091 TAOK3Q9H2K8 898 aa12.48□□□□□ -0.41
LDLRAD3-206ENST00000534091 CWC25Q9NXE8 425 aaPredicted RBP12.48□□□□□ -0.41
LDLRAD3-206ENST00000534091 PNMA6EA0A0J9YXQ4 647 aa12.47□□□□□ -0.41
LDLRAD3-206ENST00000534091 H7C1W4 665 aa12.47□□□□□ -0.41
LDLRAD3-206ENST00000534091 BBOX1O75936 387 aa12.47□□□□□ -0.41
LDLRAD3-206ENST00000534091 RGS3P49796 1198 aa12.47□□□□□ -0.41
LDLRAD3-206ENST00000534091 KAZALD1Q96I82 304 aa12.47□□□□□ -0.41
LDLRAD3-206ENST00000534091 SUCLG2Q96I99 432 aa12.47□□□□□ -0.41
LDLRAD3-206ENST00000534091 PSMD1Q99460 953 aa12.47□□□□□ -0.41
LDLRAD3-206ENST00000534091 TMX4Q9H1E5 349 aaPredicted RBP12.47□□□□□ -0.41
LDLRAD3-206ENST00000534091 PDE4AP27815 886 aa12.46□□□□□ -0.41
LDLRAD3-206ENST00000534091 FKBP4Q02790 459 aaKnown RBP eCLIP12.46□□□□□ -0.41
LDLRAD3-206ENST00000534091 RABL6Q3YEC7 729 aaPredicted RBP12.46□□□□□ -0.41
LDLRAD3-206ENST00000534091 SKAP1Q86WV1 359 aa12.46□□□□□ -0.41
LDLRAD3-206ENST00000534091 ZBTB38Q8NAP3 1195 aaPredicted RBP12.46□□□□□ -0.41
LDLRAD3-206ENST00000534091 TSHZ2Q9NRE2 1034 aa12.46□□□□□ -0.41
LDLRAD3-206ENST00000534091 NOP58Q9Y2X3 529 aaKnown RBP12.46□□□□□ -0.41
LDLRAD3-206ENST00000534091 ATP5J2-PTCD1G3V325 749 aa12.45□□□□□ -0.42
LDLRAD3-206ENST00000534091 SRGAP3O43295 1099 aa12.45□□□□□ -0.42
LDLRAD3-206ENST00000534091 RAB11FIP3O75154 756 aa12.45□□□□□ -0.42
LDLRAD3-206ENST00000534091 PCCAP05165 728 aaPredicted RBP12.45□□□□□ -0.42
LDLRAD3-206ENST00000534091 SF3B3Q15393 1217 aaKnown RBP12.45□□□□□ -0.42
LDLRAD3-206ENST00000534091 HSP90AB4PQ58FF6 505 aa12.45□□□□□ -0.42
LDLRAD3-206ENST00000534091 ANKRD45Q5TZF3 282 aa12.45□□□□□ -0.42
LDLRAD3-206ENST00000534091 DPY19L2Q6NUT2 758 aa12.45□□□□□ -0.42
LDLRAD3-206ENST00000534091 CDHR2Q9BYE9 1310 aa12.44□□□□□ -0.42
LDLRAD3-206ENST00000534091 GLTPD2A6NH11 291 aa12.44□□□□□ -0.42
LDLRAD3-206ENST00000534091 C1QTNF8P60827 252 aa12.44□□□□□ -0.42
LDLRAD3-206ENST00000534091 RASSF7Q02833 373 aa12.44□□□□□ -0.42
LDLRAD3-206ENST00000534091 DDX46Q7L014 1031 aaKnown RBP12.44□□□□□ -0.42
LDLRAD3-206ENST00000534091 PLA2G12BQ9BX93 195 aa12.44□□□□□ -0.42
LDLRAD3-206ENST00000534091 LNPKQ9C0E8 428 aa12.44□□□□□ -0.42
LDLRAD3-206ENST00000534091 BICC1Q9H694 974 aaKnown RBP12.44□□□□□ -0.42
LDLRAD3-206ENST00000534091 TIAM2Q8IVF5 1701 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms