RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 CIAPIN1Q6FI81 312 aa12.49□□□□□ -0.41
SOX9-AS1-213ENST00000533996 NIM1KQ8IY84 436 aa12.49□□□□□ -0.41
SOX9-AS1-213ENST00000533996 CEMIPQ8WUJ3 1361 aa12.48□□□□□ -0.41
SOX9-AS1-213ENST00000533996 KIF7Q2M1P5 1343 aa12.48□□□□□ -0.41
SOX9-AS1-213ENST00000533996 CDHR2Q9BYE9 1310 aa12.48□□□□□ -0.41
SOX9-AS1-213ENST00000533996 CDC37L1Q7L3B6 337 aa12.48□□□□□ -0.41
SOX9-AS1-213ENST00000533996 AKAP11Q9UKA4 1901 aa12.47□□□□□ -0.41
SOX9-AS1-213ENST00000533996 SNRPA1P09661 255 aaKnown RBP12.47□□□□□ -0.41
SOX9-AS1-213ENST00000533996 CRAMP1Q96RY5 1269 aa12.47□□□□□ -0.41
SOX9-AS1-213ENST00000533996 RIC1Q4ADV7 1423 aa12.46□□□□□ -0.41
SOX9-AS1-213ENST00000533996 RPGRQ92834 1020 aaKnown RBP12.46□□□□□ -0.41
SOX9-AS1-213ENST00000533996 TMX4Q9H1E5 349 aaPredicted RBP12.46□□□□□ -0.41
SOX9-AS1-213ENST00000533996 NUP98P52948 1817 aa12.46□□□□□ -0.42
SOX9-AS1-213ENST00000533996 FAM177BA6PVY3 158 aa12.45□□□□□ -0.42
SOX9-AS1-213ENST00000533996 ERVV-1B6SEH8 477 aa12.45□□□□□ -0.42
SOX9-AS1-213ENST00000533996 SOX10P56693 466 aa12.45□□□□□ -0.42
SOX9-AS1-213ENST00000533996 EIF4G2P78344 907 aaKnown RBP eCLIP12.45□□□□□ -0.42
SOX9-AS1-213ENST00000533996 SUPT20HQ8NEM7 779 aa12.45□□□□□ -0.42
SOX9-AS1-213ENST00000533996 CCDC102AQ96A19 550 aa12.45□□□□□ -0.42
SOX9-AS1-213ENST00000533996 GCC1Q96CN9 775 aa12.45□□□□□ -0.42
SOX9-AS1-213ENST00000533996 RBM17Q96I25 401 aaKnown RBP12.45□□□□□ -0.42
SOX9-AS1-213ENST00000533996 GLIS2Q9BZE0 524 aaPredicted RBP12.45□□□□□ -0.42
SOX9-AS1-213ENST00000533996 ZNRF3Q9ULT6 936 aa12.45□□□□□ -0.42
SOX9-AS1-213ENST00000533996 IBTKQ9P2D0 1353 aaPredicted RBP12.44□□□□□ -0.42
SOX9-AS1-213ENST00000533996 NPC1L1Q9UHC9 1359 aa12.44□□□□□ -0.42
SOX9-AS1-213ENST00000533996 PPIP5K2O43314 1243 aa12.44□□□□□ -0.42
SOX9-AS1-213ENST00000533996 KCNQ3O43525 872 aa12.44□□□□□ -0.42
SOX9-AS1-213ENST00000533996 PIP4K2AP48426 406 aaPredicted RBP12.44□□□□□ -0.42
SOX9-AS1-213ENST00000533996 CXCL9Q07325 125 aa12.44□□□□□ -0.42
SOX9-AS1-213ENST00000533996 TNIP1Q15025 636 aa12.44□□□□□ -0.42
SOX9-AS1-213ENST00000533996 NBPF26B4DH59 902 aa12.43□□□□□ -0.42
SOX9-AS1-213ENST00000533996 PPEF1O14829 653 aaPredicted RBP12.43□□□□□ -0.42
SOX9-AS1-213ENST00000533996 HUNKP57058 714 aa12.43□□□□□ -0.42
SOX9-AS1-213ENST00000533996 HLFQ16534 295 aa12.43□□□□□ -0.42
SOX9-AS1-213ENST00000533996 RGMBQ6NW40 437 aa12.43□□□□□ -0.42
SOX9-AS1-213ENST00000533996 NBPF10Q6P3W6 841 aaKnown RBP12.43□□□□□ -0.42
SOX9-AS1-213ENST00000533996 NBPF15Q8N660 670 aa12.43□□□□□ -0.42
SOX9-AS1-213ENST00000533996 RTFDC1Q9BY42 306 aaPredicted RBP12.43□□□□□ -0.42
SOX9-AS1-213ENST00000533996 ZNF408Q9H9D4 720 aa12.43□□□□□ -0.42
SOX9-AS1-213ENST00000533996 PRAMEF22A3QJZ6 481 aa12.42□□□□□ -0.42
SOX9-AS1-213ENST00000533996 FAM155AB1AL88 458 aaPredicted RBP12.42□□□□□ -0.42
SOX9-AS1-213ENST00000533996 GMPSP49915 693 aaPredicted RBP12.42□□□□□ -0.42
SOX9-AS1-213ENST00000533996 HIRAP54198 1017 aaPredicted RBP12.42□□□□□ -0.42
SOX9-AS1-213ENST00000533996 PKN2Q16513 984 aaKnown RBP12.42□□□□□ -0.42
SOX9-AS1-213ENST00000533996 AOC3Q16853 763 aa12.42□□□□□ -0.42
SOX9-AS1-213ENST00000533996 CTU1Q7Z7A3 348 aaKnown RBP12.42□□□□□ -0.42
SOX9-AS1-213ENST00000533996 NUTM1Q86Y26 1132 aa12.41□□□□□ -0.42
SOX9-AS1-213ENST00000533996 C2orf69Q8N8R5 385 aa12.41□□□□□ -0.42
SOX9-AS1-213ENST00000533996 MS4A3Q96HJ5 214 aa12.41□□□□□ -0.42
SOX9-AS1-213ENST00000533996 ZIC5Q96T25 663 aa12.41□□□□□ -0.42
SOX9-AS1-213ENST00000533996 BCL2L13Q9BXK5 485 aa12.41□□□□□ -0.42
SOX9-AS1-213ENST00000533996 RNF186Q9NXI6 227 aa12.41□□□□□ -0.42
SOX9-AS1-213ENST00000533996 ATP6V0A2Q9Y487 856 aa12.41□□□□□ -0.42
SOX9-AS1-213ENST00000533996 ABCC12Q96J65 1359 aa12.41□□□□□ -0.42
SOX9-AS1-213ENST00000533996 H7C1D1 291 aa12.4□□□□□ -0.42
SOX9-AS1-213ENST00000533996 HAX1O00165 279 aa12.4□□□□□ -0.42
SOX9-AS1-213ENST00000533996 TRPA1O75762 1119 aa12.4□□□□□ -0.42
SOX9-AS1-213ENST00000533996 HSPA5P11021 654 aaKnown RBP12.4□□□□□ -0.42
SOX9-AS1-213ENST00000533996 KIF23Q02241 960 aaPredicted RBP12.4□□□□□ -0.42
SOX9-AS1-213ENST00000533996 NLRP3Q96P20 1036 aa12.4□□□□□ -0.42
SOX9-AS1-213ENST00000533996 CNOT7Q9UIV1 285 aaKnown RBP12.4□□□□□ -0.42
SOX9-AS1-213ENST00000533996 LAMB4A4D0S4 1761 aa12.4□□□□□ -0.42
SOX9-AS1-213ENST00000533996 POLR2AP24928 1970 aaKnown RBP12.39□□□□□ -0.43
SOX9-AS1-213ENST00000533996 MAP3K15Q6ZN16 1313 aa12.39□□□□□ -0.43
SOX9-AS1-213ENST00000533996 U2SURPO15042 1029 aaKnown RBP12.39□□□□□ -0.43
SOX9-AS1-213ENST00000533996 KIAA2012Q0VF49 1180 aa12.39□□□□□ -0.43
SOX9-AS1-213ENST00000533996 USP48Q86UV5 1035 aa12.39□□□□□ -0.43
SOX9-AS1-213ENST00000533996 DPF2Q92785 391 aa12.39□□□□□ -0.43
SOX9-AS1-213ENST00000533996 GBA2Q9HCG7 927 aaPredicted RBP12.39□□□□□ -0.43
SOX9-AS1-213ENST00000533996 COL3A1P02461 1466 aaPredicted RBP12.39□□□□□ -0.43
SOX9-AS1-213ENST00000533996 BBOX1O75936 387 aa12.38□□□□□ -0.43
SOX9-AS1-213ENST00000533996 ZNF157P51786 506 aaPredicted RBP12.38□□□□□ -0.43
SOX9-AS1-213ENST00000533996 CLCN6P51797 869 aa12.38□□□□□ -0.43
SOX9-AS1-213ENST00000533996 PPP1R42Q7Z4L9 355 aa12.38□□□□□ -0.43
SOX9-AS1-213ENST00000533996 SP8Q8IXZ3 490 aa12.38□□□□□ -0.43
SOX9-AS1-213ENST00000533996 EFCAB3Q8N7B9 438 aa12.38□□□□□ -0.43
SOX9-AS1-213ENST00000533996 RTF1Q92541 710 aaKnown RBP12.38□□□□□ -0.43
SOX9-AS1-213ENST00000533996 MFRPQ9BY79 579 aa12.38□□□□□ -0.43
SOX9-AS1-213ENST00000533996 TCERG1O14776 1098 aaKnown RBP12.37□□□□□ -0.43
SOX9-AS1-213ENST00000533996 HTATSF1O43719 755 aaKnown RBP12.37□□□□□ -0.43
SOX9-AS1-213ENST00000533996 SLC10A5Q5PT55 438 aa12.37□□□□□ -0.43
SOX9-AS1-213ENST00000533996 SUSD4Q5VX71 490 aa12.37□□□□□ -0.43
SOX9-AS1-213ENST00000533996 DPP8Q6V1X1 898 aaPredicted RBP12.37□□□□□ -0.43
SOX9-AS1-213ENST00000533996 KIF6Q6ZMV9 814 aa12.37□□□□□ -0.43
SOX9-AS1-213ENST00000533996 ZNF34Q8IZ26 560 aa12.37□□□□□ -0.43
SOX9-AS1-213ENST00000533996 MPNDQ8N594 471 aa12.37□□□□□ -0.43
SOX9-AS1-213ENST00000533996 TRPM4Q8TD43 1214 aa12.37□□□□□ -0.43
SOX9-AS1-213ENST00000533996 PHACTR3Q96KR7 559 aa12.37□□□□□ -0.43
SOX9-AS1-213ENST00000533996 CSRNP1Q96S65 589 aa12.37□□□□□ -0.43
SOX9-AS1-213ENST00000533996 TMEM106CQ9BVX2 250 aa12.37□□□□□ -0.43
SOX9-AS1-213ENST00000533996 HPS5Q9UPZ3 1129 aa12.37□□□□□ -0.43
SOX9-AS1-213ENST00000533996 ANKRD36CQ5JPF3 1778 aa12.37□□□□□ -0.43
SOX9-AS1-213ENST00000533996 PER1O15534 1290 aaPredicted RBP12.36□□□□□ -0.43
SOX9-AS1-213ENST00000533996 RAD17O75943 681 aa12.36□□□□□ -0.43
SOX9-AS1-213ENST00000533996 NTSR2O95665 410 aa12.36□□□□□ -0.43
SOX9-AS1-213ENST00000533996 SLC10A3P09131 477 aa12.36□□□□□ -0.43
SOX9-AS1-213ENST00000533996 GOLGA2Q08379 1002 aa12.36□□□□□ -0.43
SOX9-AS1-213ENST00000533996 PARP10Q53GL7 1025 aa12.36□□□□□ -0.43
SOX9-AS1-213ENST00000533996 KRT26Q7Z3Y9 468 aa12.36□□□□□ -0.43
SOX9-AS1-213ENST00000533996 DCPSQ96C86 337 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms