RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 CTCFP49711 727 aaPredicted RBP23.59■■□□□ 1.37
UBXN1-216ENST00000533908 DPP8Q6V1X1 898 aaPredicted RBP23.59■■□□□ 1.37
UBXN1-216ENST00000533908 GMPSP49915 693 aaPredicted RBP23.58■■□□□ 1.37
UBXN1-216ENST00000533908 LBX1P52954 281 aa23.58■■□□□ 1.37
UBXN1-216ENST00000533908 KIAA2012Q0VF49 1180 aa23.58■■□□□ 1.37
UBXN1-216ENST00000533908 DDX46Q7L014 1031 aaKnown RBP23.58■■□□□ 1.37
UBXN1-216ENST00000533908 SUPT20HQ8NEM7 779 aa23.58■■□□□ 1.37
UBXN1-216ENST00000533908 GRAPQ13588 217 aa23.57■■□□□ 1.36
UBXN1-216ENST00000533908 PLBD2Q8NHP8 589 aa23.57■■□□□ 1.36
UBXN1-216ENST00000533908 GRAPLQ8TC17 118 aaPredicted RBP23.57■■□□□ 1.36
UBXN1-216ENST00000533908 AIDAQ96BJ3 306 aa23.57■■□□□ 1.36
UBXN1-216ENST00000533908 ISCA1Q9BUE6 129 aa23.57■■□□□ 1.36
UBXN1-216ENST00000533908 ADARB2Q9NS39 739 aaKnown RBP23.57■■□□□ 1.36
UBXN1-216ENST00000533908 YDJCA8MPS7 323 aa23.56■■□□□ 1.36
UBXN1-216ENST00000533908 HDGFL1Q5TGJ6 251 aa23.56■■□□□ 1.36
UBXN1-216ENST00000533908 ANKRD13DQ6ZTN6 518 aa23.56■■□□□ 1.36
UBXN1-216ENST00000533908 ATP5J2-PTCD1G3V325 749 aa23.55■■□□□ 1.36
UBXN1-216ENST00000533908 RAD17O75943 681 aa23.55■■□□□ 1.36
UBXN1-216ENST00000533908 HIRAP54198 1017 aaPredicted RBP23.55■■□□□ 1.36
UBXN1-216ENST00000533908 CIAPIN1Q6FI81 312 aa23.55■■□□□ 1.36
UBXN1-216ENST00000533908 FAM89AQ96GI7 184 aa23.55■■□□□ 1.36
UBXN1-216ENST00000533908 SHTN1A0MZ66 631 aa23.54■■□□□ 1.36
UBXN1-216ENST00000533908 HSPA8P11142 646 aaKnown RBP23.54■■□□□ 1.36
UBXN1-216ENST00000533908 PGAP2Q9UHJ9 254 aa23.54■■□□□ 1.36
UBXN1-216ENST00000533908 COL4A1P02462 1669 aa23.54■■□□□ 1.36
UBXN1-216ENST00000533908 DUOX1Q9NRD9 1551 aa23.53■■□□□ 1.36
UBXN1-216ENST00000533908 WDR43Q15061 677 aaKnown RBP eCLIP23.53■■□□□ 1.36
UBXN1-216ENST00000533908 CYP4F22Q6NT55 531 aa23.53■■□□□ 1.36
UBXN1-216ENST00000533908 CELF1Q92879 486 aaKnown RBP23.53■■□□□ 1.36
UBXN1-216ENST00000533908 CAPNS2Q96L46 248 aa23.53■■□□□ 1.36
UBXN1-216ENST00000533908 DBF4Q9UBU7 674 aaPredicted RBP23.53■■□□□ 1.36
UBXN1-216ENST00000533908 DDX60Q8IY21 1712 aaKnown RBP23.53■■□□□ 1.36
UBXN1-216ENST00000533908 HOXB7P09629 217 aa23.52■■□□□ 1.36
UBXN1-216ENST00000533908 SF3B3Q15393 1217 aaKnown RBP23.52■■□□□ 1.36
UBXN1-216ENST00000533908 DUSP27Q5VZP5 1158 aa23.52■■□□□ 1.36
UBXN1-216ENST00000533908 CFAP44Q96MT7 982 aa23.52■■□□□ 1.36
UBXN1-216ENST00000533908 TLL2Q9Y6L7 1015 aa23.52■■□□□ 1.36
UBXN1-216ENST00000533908 RTL5Q5HYW3 569 aaPredicted RBP23.51■■□□□ 1.35
UBXN1-216ENST00000533908 GLIS2Q9BZE0 524 aaPredicted RBP23.51■■□□□ 1.35
UBXN1-216ENST00000533908 MBIPQ9NS73 344 aa23.51■■□□□ 1.35
UBXN1-216ENST00000533908 TRPM7Q96QT4 1865 aa23.51■■□□□ 1.35
UBXN1-216ENST00000533908 ZNF853P0CG23 659 aa23.5■■□□□ 1.35
UBXN1-216ENST00000533908 MAP2K1Q02750 393 aaPredicted RBP23.5■■□□□ 1.35
UBXN1-216ENST00000533908 TRPM4Q8TD43 1214 aa23.5■■□□□ 1.35
UBXN1-216ENST00000533908 BCL2L13Q9BXK5 485 aa23.5■■□□□ 1.35
UBXN1-216ENST00000533908 GRM1Q13255 1194 aa23.49■■□□□ 1.35
UBXN1-216ENST00000533908 TNIP1Q15025 636 aa23.49■■□□□ 1.35
UBXN1-216ENST00000533908 PAXIP1Q6ZW49 1069 aaPredicted RBP23.49■■□□□ 1.35
UBXN1-216ENST00000533908 TMC4Q7Z404 712 aa23.49■■□□□ 1.35
UBXN1-216ENST00000533908 GPR101Q96P66 508 aaPredicted RBP23.49■■□□□ 1.35
UBXN1-216ENST00000533908 HYPKQ9NX55 129 aa23.49■■□□□ 1.35
UBXN1-216ENST00000533908 CNOT7Q9UIV1 285 aaKnown RBP23.49■■□□□ 1.35
UBXN1-216ENST00000533908 ZBTB12Q9Y330 459 aaPredicted RBP23.49■■□□□ 1.35
UBXN1-216ENST00000533908 LRRC37AA6NMS7 1700 aa23.48■■□□□ 1.35
UBXN1-216ENST00000533908 TRIM28Q13263 835 aaKnown RBP23.48■■□□□ 1.35
UBXN1-216ENST00000533908 POLLQ9UGP5 575 aa23.48■■□□□ 1.35
UBXN1-216ENST00000533908 NSFL1CQ9UNZ2 370 aaKnown RBP23.48■■□□□ 1.35
UBXN1-216ENST00000533908 RIMBP2O15034 1052 aa23.47■■□□□ 1.35
UBXN1-216ENST00000533908 AOC2O75106 756 aa23.47■■□□□ 1.35
UBXN1-216ENST00000533908 CELF2O95319 508 aaKnown RBP23.47■■□□□ 1.35
UBXN1-216ENST00000533908 GPSM2P81274 684 aa23.47■■□□□ 1.35
UBXN1-216ENST00000533908 DLK2Q6UY11 383 aa23.47■■□□□ 1.35
UBXN1-216ENST00000533908 SAPCD2Q86UD0 394 aa23.47■■□□□ 1.35
UBXN1-216ENST00000533908 PHAXQ9H814 394 aaKnown RBP23.47■■□□□ 1.35
UBXN1-216ENST00000533908 KCNQ5Q9NR82 932 aa23.47■■□□□ 1.35
UBXN1-216ENST00000533908 IRS4O14654 1257 aaPredicted RBP23.46■■□□□ 1.35
UBXN1-216ENST00000533908 ECE1P42892 770 aa23.46■■□□□ 1.35
UBXN1-216ENST00000533908 WASHC4Q2M389 1173 aa23.46■■□□□ 1.35
UBXN1-216ENST00000533908 ZC3H15Q8WU90 426 aaKnown RBP23.46■■□□□ 1.35
UBXN1-216ENST00000533908 CDHR2Q9BYE9 1310 aa23.46■■□□□ 1.35
UBXN1-216ENST00000533908 THSD7BQ9C0I4 1608 aa23.46■■□□□ 1.35
UBXN1-216ENST00000533908 DBNDD1Q9H9R9 158 aa23.46■■□□□ 1.35
UBXN1-216ENST00000533908 ELL2O00472 640 aaPredicted RBP23.45■■□□□ 1.34
UBXN1-216ENST00000533908 PSMD14O00487 310 aa23.45■■□□□ 1.34
UBXN1-216ENST00000533908 APAF1O14727 1248 aa23.45■■□□□ 1.34
UBXN1-216ENST00000533908 MICALL2Q8IY33 904 aa23.45■■□□□ 1.34
UBXN1-216ENST00000533908 PRKRIP1Q9H875 184 aaPredicted RBP23.45■■□□□ 1.34
UBXN1-216ENST00000533908 EGFRP00533 1210 aa23.44■■□□□ 1.34
UBXN1-216ENST00000533908 SAMD7Q7Z3H4 446 aa23.44■■□□□ 1.34
UBXN1-216ENST00000533908 C6orf229H3BNL8 230 aa23.43■■□□□ 1.34
UBXN1-216ENST00000533908 H7C1D1 291 aa23.43■■□□□ 1.34
UBXN1-216ENST00000533908 RPS8P62241 208 aaKnown RBP23.43■■□□□ 1.34
UBXN1-216ENST00000533908 DOK7Q18PE1 504 aa23.43■■□□□ 1.34
UBXN1-216ENST00000533908 RIC3Q7Z5B4 369 aa23.43■■□□□ 1.34
UBXN1-216ENST00000533908 DPF2Q92785 391 aa23.43■■□□□ 1.34
UBXN1-216ENST00000533908 SEC31BQ9NQW1 1179 aa23.43■■□□□ 1.34
UBXN1-216ENST00000533908 CDC37L1Q7L3B6 337 aa23.42■■□□□ 1.34
UBXN1-216ENST00000533908 USP48Q86UV5 1035 aa23.42■■□□□ 1.34
UBXN1-216ENST00000533908 C8orf58Q8NAV2 365 aa23.42■■□□□ 1.34
UBXN1-216ENST00000533908 TBC1D16Q8TBP0 767 aa23.42■■□□□ 1.34
UBXN1-216ENST00000533908 JARID2Q92833 1246 aaPredicted RBP23.42■■□□□ 1.34
UBXN1-216ENST00000533908 ZNF408Q9H9D4 720 aa23.42■■□□□ 1.34
UBXN1-216ENST00000533908 TSKSQ9UJT2 592 aa23.42■■□□□ 1.34
UBXN1-216ENST00000533908 RTL9Q8NET4 1388 aa23.41■■□□□ 1.34
UBXN1-216ENST00000533908 MAP2K2P36507 400 aa23.41■■□□□ 1.34
UBXN1-216ENST00000533908 ZBTB38Q8NAP3 1195 aaPredicted RBP23.41■■□□□ 1.34
UBXN1-216ENST00000533908 ABHD8Q96I13 439 aa23.4■■□□□ 1.34
UBXN1-216ENST00000533908 MYD88Q99836 296 aa23.4■■□□□ 1.34
UBXN1-216ENST00000533908 IFT57Q9NWB7 429 aa23.4■■□□□ 1.34
UBXN1-216ENST00000533908 ECE2O60344 883 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms