RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 UTYO14607 1347 aa24.99■■□□□ 1.59
CHEK1-215ENST00000533778 PPEF1O14829 653 aaPredicted RBP24.99■■□□□ 1.59
CHEK1-215ENST00000533778 GRIPAP1Q4V328 841 aa24.99■■□□□ 1.59
CHEK1-215ENST00000533778 TMC4Q7Z404 712 aa24.99■■□□□ 1.59
CHEK1-215ENST00000533778 C7orf43Q8WVR3 580 aa24.99■■□□□ 1.59
CHEK1-215ENST00000533778 CCDC93Q567U6 631 aa24.98■■□□□ 1.59
CHEK1-215ENST00000533778 INTS3Q68E01 1043 aaKnown RBP24.98■■□□□ 1.59
CHEK1-215ENST00000533778 TTLL11Q8NHH1 800 aa24.98■■□□□ 1.59
CHEK1-215ENST00000533778 HDAC5Q9UQL6 1122 aa24.98■■□□□ 1.59
CHEK1-215ENST00000533778 BRCA1P38398 1863 aaKnown RBP24.98■■□□□ 1.59
CHEK1-215ENST00000533778 RTKN2Q8IZC4 609 aa24.97■■□□□ 1.59
CHEK1-215ENST00000533778 MS4A1P11836 297 aa24.96■■□□□ 1.59
CHEK1-215ENST00000533778 FTSJ3Q8IY81 847 aaKnown RBP24.96■■□□□ 1.59
CHEK1-215ENST00000533778 USP44Q9H0E7 712 aa24.96■■□□□ 1.59
CHEK1-215ENST00000533778 CSF1RP07333 972 aa24.95■■□□□ 1.58
CHEK1-215ENST00000533778 NBPF7P0C2Y1 421 aaPredicted RBP24.95■■□□□ 1.58
CHEK1-215ENST00000533778 RPS8P62241 208 aaKnown RBP24.95■■□□□ 1.58
CHEK1-215ENST00000533778 CCDC85AQ96PX6 553 aaPredicted RBP24.95■■□□□ 1.58
CHEK1-215ENST00000533778 CDC5LQ99459 802 aaKnown RBP24.95■■□□□ 1.58
CHEK1-215ENST00000533778 ATP6V0A2Q9Y487 856 aa24.95■■□□□ 1.58
CHEK1-215ENST00000533778 RTL9Q8NET4 1388 aa24.94■■□□□ 1.58
CHEK1-215ENST00000533778 SP8Q8IXZ3 490 aa24.94■■□□□ 1.58
CHEK1-215ENST00000533778 CLUAP1Q96AJ1 413 aa24.94■■□□□ 1.58
CHEK1-215ENST00000533778 DDX60Q8IY21 1712 aaKnown RBP24.94■■□□□ 1.58
CHEK1-215ENST00000533778 FOXO4P98177 505 aa24.93■■□□□ 1.58
CHEK1-215ENST00000533778 DZIP1LQ8IYY4 767 aaKnown RBP24.93■■□□□ 1.58
CHEK1-215ENST00000533778 CELF1Q92879 486 aaKnown RBP24.93■■□□□ 1.58
CHEK1-215ENST00000533778 ARFGEF1Q9Y6D6 1849 aa24.92■■□□□ 1.58
CHEK1-215ENST00000533778 ANKRD18AQ8IVF6 992 aa24.92■■□□□ 1.58
CHEK1-215ENST00000533778 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.92■■□□□ 1.58
CHEK1-215ENST00000533778 TAOK3Q9H2K8 898 aa24.92■■□□□ 1.58
CHEK1-215ENST00000533778 GREM2Q9H772 168 aa24.92■■□□□ 1.58
CHEK1-215ENST00000533778 SEC31BQ9NQW1 1179 aa24.92■■□□□ 1.58
CHEK1-215ENST00000533778 LTBP3Q9NS15 1303 aa24.91■■□□□ 1.58
CHEK1-215ENST00000533778 LAMB2P55268 1798 aa24.91■■□□□ 1.58
CHEK1-215ENST00000533778 UBTFL1P0CB47 393 aaPredicted RBP24.91■■□□□ 1.58
CHEK1-215ENST00000533778 SUCLG2Q96I99 432 aa24.91■■□□□ 1.58
CHEK1-215ENST00000533778 ANKRD18BA2A2Z9 1011 aa24.9■■□□□ 1.58
CHEK1-215ENST00000533778 GNAI3P08754 354 aa24.9■■□□□ 1.58
CHEK1-215ENST00000533778 IFIT5Q13325 482 aaKnown RBP24.9■■□□□ 1.58
CHEK1-215ENST00000533778 LMBR1LQ6UX01 489 aa24.9■■□□□ 1.58
CHEK1-215ENST00000533778 CHMP3Q9Y3E7 222 aa24.9■■□□□ 1.58
CHEK1-215ENST00000533778 SLX4Q8IY92 1834 aa24.9■■□□□ 1.58
CHEK1-215ENST00000533778 NFKBIEO00221 500 aa24.89■■□□□ 1.58
CHEK1-215ENST00000533778 ITGA6P23229 1130 aa24.89■■□□□ 1.58
CHEK1-215ENST00000533778 IGHMBP2P38935 993 aaKnown RBP24.89■■□□□ 1.58
CHEK1-215ENST00000533778 FKBP4Q02790 459 aaKnown RBP eCLIP24.89■■□□□ 1.58
CHEK1-215ENST00000533778 CCDC57Q2TAC2 916 aa24.89■■□□□ 1.58
CHEK1-215ENST00000533778 FAM161AQ3B820 660 aa24.89■■□□□ 1.58
CHEK1-215ENST00000533778 TNNQ9UQP3 1299 aa24.89■■□□□ 1.58
CHEK1-215ENST00000533778 GOLGB1Q14789 3259 aaKnown RBP24.89■■□□□ 1.57
CHEK1-215ENST00000533778 LMNB1P20700 586 aa24.88■■□□□ 1.57
CHEK1-215ENST00000533778 EPHA10Q5JZY3 1008 aa24.88■■□□□ 1.57
CHEK1-215ENST00000533778 OLFM4Q6UX06 510 aa24.88■■□□□ 1.57
CHEK1-215ENST00000533778 TMEM57Q8N5G2 664 aa24.88■■□□□ 1.57
CHEK1-215ENST00000533778 PSMD1Q99460 953 aa24.88■■□□□ 1.57
CHEK1-215ENST00000533778 RASSF7Q02833 373 aa24.87■■□□□ 1.57
CHEK1-215ENST00000533778 SUPT20HQ8NEM7 779 aa24.87■■□□□ 1.57
CHEK1-215ENST00000533778 KAZALD1Q96I82 304 aa24.87■■□□□ 1.57
CHEK1-215ENST00000533778 RABL6Q3YEC7 729 aaPredicted RBP24.86■■□□□ 1.57
CHEK1-215ENST00000533778 C9orf131Q5VYM1 1079 aa24.86■■□□□ 1.57
CHEK1-215ENST00000533778 DPP8Q6V1X1 898 aaPredicted RBP24.86■■□□□ 1.57
CHEK1-215ENST00000533778 MPNDQ8N594 471 aa24.86■■□□□ 1.57
CHEK1-215ENST00000533778 MPHOSPH8Q99549 860 aa24.86■■□□□ 1.57
CHEK1-215ENST00000533778 BICC1Q9H694 974 aaKnown RBP24.86■■□□□ 1.57
CHEK1-215ENST00000533778 BSDC1Q9NW68 430 aaPredicted RBP24.86■■□□□ 1.57
CHEK1-215ENST00000533778 YY1P25490 414 aa24.85■■□□□ 1.57
CHEK1-215ENST00000533778 TAF7LQ5H9L4 462 aa24.85■■□□□ 1.57
CHEK1-215ENST00000533778 ITPRIPQ8IWB1 547 aa24.85■■□□□ 1.57
CHEK1-215ENST00000533778 MEIS3Q99687 375 aa24.85■■□□□ 1.57
CHEK1-215ENST00000533778 RNF181Q9P0P0 153 aa24.85■■□□□ 1.57
CHEK1-215ENST00000533778 ANKRD44Q8N8A2 993 aa24.83■■□□□ 1.57
CHEK1-215ENST00000533778 VPS33BQ9H267 617 aa24.83■■□□□ 1.57
CHEK1-215ENST00000533778 NSFL1CQ9UNZ2 370 aaKnown RBP24.83■■□□□ 1.57
CHEK1-215ENST00000533778 RLBP1P12271 317 aa24.82■■□□□ 1.56
CHEK1-215ENST00000533778 RTFDC1Q9BY42 306 aaPredicted RBP24.82■■□□□ 1.56
CHEK1-215ENST00000533778 SNED1Q8TER0 1413 aa24.81■■□□□ 1.56
CHEK1-215ENST00000533778 PLIN1O60240 522 aa24.81■■□□□ 1.56
CHEK1-215ENST00000533778 GNAI2P04899 355 aa24.81■■□□□ 1.56
CHEK1-215ENST00000533778 PDE3AQ14432 1141 aa24.81■■□□□ 1.56
CHEK1-215ENST00000533778 PANK1Q8TE04 598 aa24.81■■□□□ 1.56
CHEK1-215ENST00000533778 ZNF277Q9NRM2 450 aaPredicted RBP24.81■■□□□ 1.56
CHEK1-215ENST00000533778 ANKIB1Q9P2G1 1089 aa24.81■■□□□ 1.56
CHEK1-215ENST00000533778 LRRFIP2Q9Y608 721 aaKnown RBP24.81■■□□□ 1.56
CHEK1-215ENST00000533778 GPSM2P81274 684 aa24.8■■□□□ 1.56
CHEK1-215ENST00000533778 PODXL2Q9NZ53 605 aa24.8■■□□□ 1.56
CHEK1-215ENST00000533778 ZC3H4Q9UPT8 1303 aaKnown RBP24.8■■□□□ 1.56
CHEK1-215ENST00000533778 IARSP41252 1262 aaKnown RBP24.79■■□□□ 1.56
CHEK1-215ENST00000533778 ANKRD2Q9GZV1 360 aa24.79■■□□□ 1.56
CHEK1-215ENST00000533778 CHMP4BQ9H444 224 aaKnown RBP24.79■■□□□ 1.56
CHEK1-215ENST00000533778 MINPP1Q9UNW1 487 aa24.79■■□□□ 1.56
CHEK1-215ENST00000533778 UTRNP46939 3433 aa24.79■■□□□ 1.56
CHEK1-215ENST00000533778 PRELPP51888 382 aa24.78■■□□□ 1.56
CHEK1-215ENST00000533778 LDHAL6AQ6ZMR3 332 aa24.78■■□□□ 1.56
CHEK1-215ENST00000533778 SLC51AQ86UW1 340 aa24.78■■□□□ 1.56
CHEK1-215ENST00000533778 EYA3Q99504 573 aa24.78■■□□□ 1.56
CHEK1-215ENST00000533778 CACNA1SQ13698 1873 aa24.78■■□□□ 1.56
CHEK1-215ENST00000533778 XDHP47989 1333 aa24.78■■□□□ 1.56
CHEK1-215ENST00000533778 C6orf229H3BNL8 230 aa24.77■■□□□ 1.56
CHEK1-215ENST00000533778 ZBTB7BO15156 539 aaPredicted RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms