RNA–Protein interactions for RNA: ENST00000533678.1

RDX-214, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-214ENST00000533678 ABCC4O15439 1325 aa20.92■□□□□ 0.94
RDX-214ENST00000533678 FSTL1Q12841 308 aa20.91■□□□□ 0.94
RDX-214ENST00000533678 GRAPQ13588 217 aa20.91■□□□□ 0.94
RDX-214ENST00000533678 GRAPLQ8TC17 118 aaPredicted RBP20.91■□□□□ 0.94
RDX-214ENST00000533678 PSMD1Q99460 953 aa20.91■□□□□ 0.94
RDX-214ENST00000533678 CDHR2Q9BYE9 1310 aa20.91■□□□□ 0.94
RDX-214ENST00000533678 ATP6V0A2Q9Y487 856 aa20.91■□□□□ 0.94
RDX-214ENST00000533678 NEURL1BA8MQ27 555 aa20.9■□□□□ 0.94
RDX-214ENST00000533678 RTL5Q5HYW3 569 aaPredicted RBP20.9■□□□□ 0.94
RDX-214ENST00000533678 SNED1Q8TER0 1413 aa20.89■□□□□ 0.94
RDX-214ENST00000533678 PDE8AO60658 829 aa20.89■□□□□ 0.93
RDX-214ENST00000533678 CT47B1P0C2W7 299 aaPredicted RBP20.89■□□□□ 0.93
RDX-214ENST00000533678 SP8Q8IXZ3 490 aa20.89■□□□□ 0.93
RDX-214ENST00000533678 LINS1Q8NG48 757 aa20.89■□□□□ 0.93
RDX-214ENST00000533678 CDCA7LQ96GN5 454 aa20.89■□□□□ 0.93
RDX-214ENST00000533678 OLFM4Q6UX06 510 aa20.88■□□□□ 0.93
RDX-214ENST00000533678 JMYQ8N9B5 988 aa20.88■□□□□ 0.93
RDX-214ENST00000533678 MYH3P11055 1940 aa20.88■□□□□ 0.93
RDX-214ENST00000533678 TAF1P21675 1872 aa20.88■□□□□ 0.93
RDX-214ENST00000533678 GLTPD2A6NH11 291 aa20.87■□□□□ 0.93
RDX-214ENST00000533678 CWF19L2Q2TBE0 894 aaKnown RBP20.87■□□□□ 0.93
RDX-214ENST00000533678 DPY19L2Q6NUT2 758 aa20.87■□□□□ 0.93
RDX-214ENST00000533678 VPS33BQ9H267 617 aa20.87■□□□□ 0.93
RDX-214ENST00000533678 H7C1W4 665 aa20.86■□□□□ 0.93
RDX-214ENST00000533678 GCKRQ14397 625 aa20.86■□□□□ 0.93
RDX-214ENST00000533678 ALDH1L2Q3SY69 923 aa20.86■□□□□ 0.93
RDX-214ENST00000533678 CCDC152Q4G0S7 254 aa20.86■□□□□ 0.93
RDX-214ENST00000533678 COL13A1Q5TAT6 717 aaPredicted RBP20.86■□□□□ 0.93
RDX-214ENST00000533678 IARSP41252 1262 aaKnown RBP20.85■□□□□ 0.93
RDX-214ENST00000533678 MRPL50Q8N5N7 158 aaKnown RBP20.85■□□□□ 0.93
RDX-214ENST00000533678 SUPT20HQ8NEM7 779 aa20.85■□□□□ 0.93
RDX-214ENST00000533678 ZNF277Q9NRM2 450 aaPredicted RBP20.85■□□□□ 0.93
RDX-214ENST00000533678 CAPN15O75808 1086 aa20.84■□□□□ 0.93
RDX-214ENST00000533678 LRRC37AA6NMS7 1700 aa20.84■□□□□ 0.93
RDX-214ENST00000533678 PTPRCP08575 1304 aa20.83■□□□□ 0.93
RDX-214ENST00000533678 RPS8P62241 208 aaKnown RBP20.83■□□□□ 0.93
RDX-214ENST00000533678 HNRNPUQ00839 825 aaKnown RBP eCLIP20.83■□□□□ 0.93
RDX-214ENST00000533678 BEND3Q5T5X7 828 aa20.83■□□□□ 0.93
RDX-214ENST00000533678 MPNDQ8N594 471 aa20.83■□□□□ 0.93
RDX-214ENST00000533678 SMC1BQ8NDV3 1235 aa20.83■□□□□ 0.93
RDX-214ENST00000533678 RTFDC1Q9BY42 306 aaPredicted RBP20.83■□□□□ 0.93
RDX-214ENST00000533678 F6X3S4 739 aa20.82■□□□□ 0.92
RDX-214ENST00000533678 DPP8Q6V1X1 898 aaPredicted RBP20.82■□□□□ 0.92
RDX-214ENST00000533678 TNS4Q8IZW8 715 aa20.82■□□□□ 0.92
RDX-214ENST00000533678 JDP2Q8WYK2 163 aa20.82■□□□□ 0.92
RDX-214ENST00000533678 SSH1Q8WYL5 1049 aa20.82■□□□□ 0.92
RDX-214ENST00000533678 JARID2Q92833 1246 aaPredicted RBP20.82■□□□□ 0.92
RDX-214ENST00000533678 CELF1Q92879 486 aaKnown RBP20.82■□□□□ 0.92
RDX-214ENST00000533678 PLA2G12BQ9BX93 195 aa20.82■□□□□ 0.92
RDX-214ENST00000533678 RRAGCQ9HB90 399 aa20.82■□□□□ 0.92
RDX-214ENST00000533678 ALDH1L1O75891 902 aa20.81■□□□□ 0.92
RDX-214ENST00000533678 CTSWP56202 376 aa20.81■□□□□ 0.92
RDX-214ENST00000533678 UBE3BQ7Z3V4 1068 aa20.81■□□□□ 0.92
RDX-214ENST00000533678 CASP7P55210 303 aa20.8■□□□□ 0.92
RDX-214ENST00000533678 TTLL11Q8NHH1 800 aa20.8■□□□□ 0.92
RDX-214ENST00000533678 RTL9Q8NET4 1388 aa20.8■□□□□ 0.92
RDX-214ENST00000533678 FZD9O00144 591 aa20.79■□□□□ 0.92
RDX-214ENST00000533678 VEGFAP15692 232 aaPredicted RBP20.79■□□□□ 0.92
RDX-214ENST00000533678 CDC5LQ99459 802 aaKnown RBP20.79■□□□□ 0.92
RDX-214ENST00000533678 BRPF1P55201 1214 aaPredicted RBP20.78■□□□□ 0.92
RDX-214ENST00000533678 SLC4A10Q6U841 1118 aa20.78■□□□□ 0.92
RDX-214ENST00000533678 ANKRD18AQ8IVF6 992 aa20.78■□□□□ 0.92
RDX-214ENST00000533678 LARGE2Q8N3Y3 721 aa20.78■□□□□ 0.92
RDX-214ENST00000533678 SRCIN1Q9C0H9 1055 aa20.78■□□□□ 0.92
RDX-214ENST00000533678 SEC31BQ9NQW1 1179 aa20.78■□□□□ 0.92
RDX-214ENST00000533678 SMC4Q9NTJ3 1288 aa20.78■□□□□ 0.92
RDX-214ENST00000533678 PCNTO95613 3336 aa20.78■□□□□ 0.92
RDX-214ENST00000533678 GRM8O00222 908 aa20.76■□□□□ 0.91
RDX-214ENST00000533678 PPIP5K2O43314 1243 aa20.76■□□□□ 0.91
RDX-214ENST00000533678 CSF1RP07333 972 aa20.76■□□□□ 0.91
RDX-214ENST00000533678 EIF6P56537 245 aaKnown RBP20.76■□□□□ 0.91
RDX-214ENST00000533678 NIM1KQ8IY84 436 aa20.76■□□□□ 0.91
RDX-214ENST00000533678 C9orf78Q9NZ63 289 aaPredicted RBP20.76■□□□□ 0.91
RDX-214ENST00000533678 NSFL1CQ9UNZ2 370 aaKnown RBP20.76■□□□□ 0.91
RDX-214ENST00000533678 SCN4AP35499 1836 aa20.76■□□□□ 0.91
RDX-214ENST00000533678 DDNO94850 711 aaPredicted RBP20.75■□□□□ 0.91
RDX-214ENST00000533678 SLC51AQ86UW1 340 aa20.75■□□□□ 0.91
RDX-214ENST00000533678 CCDC85AQ96PX6 553 aaPredicted RBP20.75■□□□□ 0.91
RDX-214ENST00000533678 COL4A1P02462 1669 aa20.74■□□□□ 0.91
RDX-214ENST00000533678 KIAA2012Q0VF49 1180 aa20.74■□□□□ 0.91
RDX-214ENST00000533678 GPC2Q8N158 579 aa20.74■□□□□ 0.91
RDX-214ENST00000533678 L3MBTL3Q96JM7 780 aaPredicted RBP20.74■□□□□ 0.91
RDX-214ENST00000533678 EYA3Q99504 573 aa20.74■□□□□ 0.91
RDX-214ENST00000533678 BCL2L13Q9BXK5 485 aa20.74■□□□□ 0.91
RDX-214ENST00000533678 GREM2Q9H772 168 aa20.74■□□□□ 0.91
RDX-214ENST00000533678 PODXL2Q9NZ53 605 aa20.74■□□□□ 0.91
RDX-214ENST00000533678 LTBP1Q14766 1721 aa20.73■□□□□ 0.91
RDX-214ENST00000533678 IQCA1LA6NCM1 817 aa20.73■□□□□ 0.91
RDX-214ENST00000533678 HSPA1AP0DMV8 641 aaKnown RBP20.73■□□□□ 0.91
RDX-214ENST00000533678 HSPA1BP0DMV9 641 aaKnown RBP20.73■□□□□ 0.91
RDX-214ENST00000533678 GPSM2P81274 684 aa20.73■□□□□ 0.91
RDX-214ENST00000533678 AOC3Q16853 763 aa20.73■□□□□ 0.91
RDX-214ENST00000533678 BSDC1Q9NW68 430 aaPredicted RBP20.73■□□□□ 0.91
RDX-214ENST00000533678 ZNF541Q9H0D2 1346 aa20.73■□□□□ 0.91
RDX-214ENST00000533678 DUOX1Q9NRD9 1551 aa20.72■□□□□ 0.91
RDX-214ENST00000533678 IGHMBP2P38935 993 aaKnown RBP20.72■□□□□ 0.91
RDX-214ENST00000533678 RARSP54136 660 aaKnown RBP20.72■□□□□ 0.91
RDX-214ENST00000533678 ZNRF3Q9ULT6 936 aa20.72■□□□□ 0.91
RDX-214ENST00000533678 COL4A5P29400 1685 aa20.72■□□□□ 0.91
RDX-214ENST00000533678 ZBED9Q6R2W3 1325 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms