RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 ABCC4O15439 1325 aa26.48■■□□□ 1.83
VPS51-211ENST00000533487 LTBP3Q9NS15 1303 aa26.48■■□□□ 1.83
VPS51-211ENST00000533487 GRAPQ13588 217 aa26.48■■□□□ 1.83
VPS51-211ENST00000533487 CCDC93Q567U6 631 aa26.48■■□□□ 1.83
VPS51-211ENST00000533487 RTKN2Q8IZC4 609 aa26.48■■□□□ 1.83
VPS51-211ENST00000533487 GRAPLQ8TC17 118 aaPredicted RBP26.48■■□□□ 1.83
VPS51-211ENST00000533487 HDAC5Q9UQL6 1122 aa26.48■■□□□ 1.83
VPS51-211ENST00000533487 C21orf2O43822 256 aa26.47■■□□□ 1.83
VPS51-211ENST00000533487 CTSWP56202 376 aa26.47■■□□□ 1.83
VPS51-211ENST00000533487 ATF7IPQ6VMQ6 1270 aa26.47■■□□□ 1.83
VPS51-211ENST00000533487 SBF1O95248 1867 aa26.47■■□□□ 1.83
VPS51-211ENST00000533487 BCAR3O75815 825 aa26.46■■□□□ 1.83
VPS51-211ENST00000533487 ZKSCAN2Q63HK3 967 aa26.46■■□□□ 1.83
VPS51-211ENST00000533487 GOLGB1Q14789 3259 aaKnown RBP26.46■■□□□ 1.83
VPS51-211ENST00000533487 PPEF1O14829 653 aaPredicted RBP26.45■■□□□ 1.82
VPS51-211ENST00000533487 SP8Q8IXZ3 490 aa26.44■■□□□ 1.82
VPS51-211ENST00000533487 TTLL11Q8NHH1 800 aa26.44■■□□□ 1.82
VPS51-211ENST00000533487 ATP6V0A2Q9Y487 856 aa26.44■■□□□ 1.82
VPS51-211ENST00000533487 LRRC37AA6NMS7 1700 aa26.43■■□□□ 1.82
VPS51-211ENST00000533487 CSF1RP07333 972 aa26.43■■□□□ 1.82
VPS51-211ENST00000533487 INTS3Q68E01 1043 aaKnown RBP26.43■■□□□ 1.82
VPS51-211ENST00000533487 CDC5LQ99459 802 aaKnown RBP26.43■■□□□ 1.82
VPS51-211ENST00000533487 MS4A1P11836 297 aa26.42■■□□□ 1.82
VPS51-211ENST00000533487 TRIM27P14373 513 aa26.42■■□□□ 1.82
VPS51-211ENST00000533487 TAOK3Q9H2K8 898 aa26.42■■□□□ 1.82
VPS51-211ENST00000533487 ZC3H4Q9UPT8 1303 aaKnown RBP26.41■■□□□ 1.82
VPS51-211ENST00000533487 DICER1Q9UPY3 1922 aaKnown RBP26.41■■□□□ 1.82
VPS51-211ENST00000533487 LMNB1P20700 586 aa26.41■■□□□ 1.82
VPS51-211ENST00000533487 RPS8P62241 208 aaKnown RBP26.41■■□□□ 1.82
VPS51-211ENST00000533487 JARID2Q92833 1246 aaPredicted RBP26.41■■□□□ 1.82
VPS51-211ENST00000533487 FRAT1Q92837 279 aaPredicted RBP26.41■■□□□ 1.82
VPS51-211ENST00000533487 PSMD1Q99460 953 aa26.41■■□□□ 1.82
VPS51-211ENST00000533487 TAF1P21675 1872 aa26.4■■□□□ 1.82
VPS51-211ENST00000533487 CCDC88AQ3V6T2 1871 aa26.4■■□□□ 1.82
VPS51-211ENST00000533487 RCAN3Q9UKA8 241 aa26.4■■□□□ 1.82
VPS51-211ENST00000533487 SNED1Q8TER0 1413 aa26.39■■□□□ 1.82
VPS51-211ENST00000533487 NFKBIEO00221 500 aa26.39■■□□□ 1.82
VPS51-211ENST00000533487 FKBP4Q02790 459 aaKnown RBP eCLIP26.39■■□□□ 1.82
VPS51-211ENST00000533487 USP44Q9H0E7 712 aa26.39■■□□□ 1.82
VPS51-211ENST00000533487 VPS33BQ9H267 617 aa26.39■■□□□ 1.82
VPS51-211ENST00000533487 NBPF7P0C2Y1 421 aaPredicted RBP26.37■■□□□ 1.81
VPS51-211ENST00000533487 YY1P25490 414 aa26.37■■□□□ 1.81
VPS51-211ENST00000533487 FOXO4P98177 505 aa26.37■■□□□ 1.81
VPS51-211ENST00000533487 ANKRD18AQ8IVF6 992 aa26.37■■□□□ 1.81
VPS51-211ENST00000533487 SUPT20HQ8NEM7 779 aa26.37■■□□□ 1.81
VPS51-211ENST00000533487 CELF1Q92879 486 aaKnown RBP26.37■■□□□ 1.81
VPS51-211ENST00000533487 ZNF219Q9P2Y4 722 aaPredicted RBP26.37■■□□□ 1.81
VPS51-211ENST00000533487 YTHDC1Q96MU7 727 aaKnown RBP26.36■■□□□ 1.81
VPS51-211ENST00000533487 GREM2Q9H772 168 aa26.36■■□□□ 1.81
VPS51-211ENST00000533487 UTRNP46939 3433 aa26.36■■□□□ 1.81
VPS51-211ENST00000533487 GNAI3P08754 354 aa26.35■■□□□ 1.81
VPS51-211ENST00000533487 ANKRD18BA2A2Z9 1011 aa26.34■■□□□ 1.81
VPS51-211ENST00000533487 IFIT5Q13325 482 aaKnown RBP26.34■■□□□ 1.81
VPS51-211ENST00000533487 RABL6Q3YEC7 729 aaPredicted RBP26.34■■□□□ 1.81
VPS51-211ENST00000533487 FTSJ3Q8IY81 847 aaKnown RBP26.34■■□□□ 1.81
VPS51-211ENST00000533487 DZIP1LQ8IYY4 767 aaKnown RBP26.34■■□□□ 1.81
VPS51-211ENST00000533487 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.34■■□□□ 1.81
VPS51-211ENST00000533487 RTFDC1Q9BY42 306 aaPredicted RBP26.34■■□□□ 1.81
VPS51-211ENST00000533487 SEC31BQ9NQW1 1179 aa26.34■■□□□ 1.81
VPS51-211ENST00000533487 BSDC1Q9NW68 430 aaPredicted RBP26.34■■□□□ 1.81
VPS51-211ENST00000533487 UBTFL1P0CB47 393 aaPredicted RBP26.33■■□□□ 1.81
VPS51-211ENST00000533487 ITGA6P23229 1130 aa26.33■■□□□ 1.81
VPS51-211ENST00000533487 IGHMBP2P38935 993 aaKnown RBP26.33■■□□□ 1.81
VPS51-211ENST00000533487 C9orf131Q5VYM1 1079 aa26.33■■□□□ 1.81
VPS51-211ENST00000533487 MPNDQ8N594 471 aa26.33■■□□□ 1.81
VPS51-211ENST00000533487 RASSF7Q02833 373 aa26.32■■□□□ 1.8
VPS51-211ENST00000533487 LMBR1LQ6UX01 489 aa26.32■■□□□ 1.8
VPS51-211ENST00000533487 SUCLG2Q96I99 432 aa26.32■■□□□ 1.8
VPS51-211ENST00000533487 RNF181Q9P0P0 153 aa26.32■■□□□ 1.8
VPS51-211ENST00000533487 CCDC57Q2TAC2 916 aa26.31■■□□□ 1.8
VPS51-211ENST00000533487 FAM161AQ3B820 660 aa26.31■■□□□ 1.8
VPS51-211ENST00000533487 DPP8Q6V1X1 898 aaPredicted RBP26.31■■□□□ 1.8
VPS51-211ENST00000533487 PODXL2Q9NZ53 605 aa26.31■■□□□ 1.8
VPS51-211ENST00000533487 TIAM2Q8IVF5 1701 aa26.31■■□□□ 1.8
VPS51-211ENST00000533487 KAZALD1Q96I82 304 aa26.3■■□□□ 1.8
VPS51-211ENST00000533487 CCDC85AQ96PX6 553 aaPredicted RBP26.3■■□□□ 1.8
VPS51-211ENST00000533487 LTBP1Q14766 1721 aa26.29■■□□□ 1.8
VPS51-211ENST00000533487 EPHA10Q5JZY3 1008 aa26.29■■□□□ 1.8
VPS51-211ENST00000533487 CLUAP1Q96AJ1 413 aa26.29■■□□□ 1.8
VPS51-211ENST00000533487 MPHOSPH8Q99549 860 aa26.29■■□□□ 1.8
VPS51-211ENST00000533487 SPEF2Q9C093 1822 aa26.29■■□□□ 1.8
VPS51-211ENST00000533487 IARSP41252 1262 aaKnown RBP26.28■■□□□ 1.8
VPS51-211ENST00000533487 OLFM4Q6UX06 510 aa26.28■■□□□ 1.8
VPS51-211ENST00000533487 BICC1Q9H694 974 aaKnown RBP26.28■■□□□ 1.8
VPS51-211ENST00000533487 CHMP3Q9Y3E7 222 aa26.28■■□□□ 1.8
VPS51-211ENST00000533487 TMEM57Q8N5G2 664 aa26.27■■□□□ 1.8
VPS51-211ENST00000533487 COL4A1P02462 1669 aa26.27■■□□□ 1.8
VPS51-211ENST00000533487 XDHP47989 1333 aa26.26■■□□□ 1.79
VPS51-211ENST00000533487 ANKRD2Q9GZV1 360 aa26.26■■□□□ 1.79
VPS51-211ENST00000533487 CHMP4BQ9H444 224 aaKnown RBP26.26■■□□□ 1.79
VPS51-211ENST00000533487 NSFL1CQ9UNZ2 370 aaKnown RBP26.26■■□□□ 1.79
VPS51-211ENST00000533487 PRELPP51888 382 aa26.25■■□□□ 1.79
VPS51-211ENST00000533487 TAF7LQ5H9L4 462 aa26.25■■□□□ 1.79
VPS51-211ENST00000533487 ANKRD44Q8N8A2 993 aa26.25■■□□□ 1.79
VPS51-211ENST00000533487 JDP2Q8WYK2 163 aa26.25■■□□□ 1.79
VPS51-211ENST00000533487 EYA3Q99504 573 aa26.25■■□□□ 1.79
VPS51-211ENST00000533487 MEIS3Q99687 375 aa26.25■■□□□ 1.79
VPS51-211ENST00000533487 PDE3AQ14432 1141 aa26.24■■□□□ 1.79
VPS51-211ENST00000533487 ZNF277Q9NRM2 450 aaPredicted RBP26.24■■□□□ 1.79
VPS51-211ENST00000533487 ANKIB1Q9P2G1 1089 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 201.6 ms